DatasetGMP.GMP.mono_Pheno.cls
#Group1_versus_Group3.GMP.mono_Pheno.cls
#Group1_versus_Group3_repos
PhenotypeGMP.mono_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class0
GeneSetHALLMARK_PROTEIN_SECRETION
Enrichment Score (ES)0.23316285
Normalized Enrichment Score (NES)1.1366495
Nominal p-value0.2881002
FDR q-value0.9947628
FWER p-Value0.94
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_PROTEIN_SECRETION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Galc11040.460-0.0199Yes
2Cltc12520.436-0.0006Yes
3Scrn115760.3990.0090Yes
4Kif1b19040.3730.0170Yes
5Arfgef222600.3480.0224Yes
6Zw1025460.3220.0291Yes
7Abca125520.3210.0478Yes
8Bnip326710.3130.0611Yes
9Scamp128680.3000.0704Yes
10Napa32790.2760.0691Yes
11Ap1g135880.2580.0712Yes
12Atp6v1h36110.2570.0853Yes
13Arfgef138890.2440.0878Yes
14Atp1a139290.2420.1003Yes
15Anp32e40610.2350.1086Yes
16Sec31a43080.2270.1114Yes
17Yipf644160.2210.1198Yes
18Igf2r45750.2160.1258Yes
19Gla46190.2140.1365Yes
20Ap3b146250.2130.1488Yes
21Copb149210.2030.1481Yes
22Golga450440.1970.1545Yes
23Mon252260.1910.1580Yes
24Uso152460.1910.1684Yes
25Snap2352500.1900.1794Yes
26Vamp453240.1870.1873Yes
27Rab5a53310.1870.1980Yes
28Atp6v1b153840.1850.2067Yes
29Gosr255900.1770.2084Yes
30Copb257350.1720.2123Yes
31Vps4559720.1630.2119Yes
32Tpd5259980.1620.2203Yes
33Stx1662600.1520.2181Yes
34Cog262740.1520.2264Yes
35Arfip163240.1500.2332Yes
36Stx1270860.1240.2081No
37Adam1077760.1050.1850No
38Snx278570.1030.1876No
39Stx784220.0860.1687No
40Ocrl85630.0820.1676No
41Ap2s185670.0820.1722No
42Mapk186670.0780.1726No
43Ctsc88270.0730.1702No
44Lman190350.0670.1653No
45Ap2b194710.0540.1500No
46Ica198950.0420.1344No
47Dop1a102180.0310.1226No
48Stam102550.0300.1228No
49Sgms1102670.0300.1241No
50Lamp2105760.0210.1123No
51M6pr108150.0140.1030No
52Atp7a112990.0000.0825No
53Dnm1l11545-0.0030.0723No
54Sec24d11619-0.0060.0695No
55Ppt111646-0.0060.0688No
56Arf111743-0.0100.0653No
57Sec22b11938-0.0160.0579No
58Gbf111979-0.0170.0572No
59Rab2a12093-0.0200.0536No
60Pam12664-0.0360.0315No
61Rps6ka312670-0.0360.0334No
62Rab22a12675-0.0360.0353No
63Vps4b13278-0.0550.0130No
64Arcn113344-0.0570.0136No
65Napg13602-0.0650.0065No
66Ap3s114167-0.083-0.0126No
67Scamp314648-0.098-0.0273No
68Tmed1014737-0.101-0.0251No
69Clcn315177-0.116-0.0370No
70Rab1415426-0.124-0.0402No
71Vamp316135-0.150-0.0615No
72Clta16234-0.153-0.0567No
73Ergic316571-0.165-0.0613No
74Cln516649-0.167-0.0548No
75Ykt617101-0.181-0.0633No
76Cav217272-0.188-0.0595No
77Tsg10117511-0.197-0.0580No
78Egfr17585-0.200-0.0494No
79Bet117593-0.201-0.0379No
80Dst18115-0.225-0.0469No
81Cope18466-0.241-0.0477No
82Tmx118520-0.242-0.0357No
83Tom1l118697-0.251-0.0285No
84Sspn18784-0.254-0.0173No
85Sod118955-0.261-0.0092No
86Rer118956-0.2610.0061No
87Arfgap319373-0.2770.0047No
88Rab919448-0.2810.0180No
89Tspan820090-0.3120.0090No
90Krt1820480-0.3350.0121No
91Ap2m120685-0.3480.0238No
92Gnas21783-0.4280.0023No
93Cd6322360-0.4820.0061No
94Sh3gl223505-0.8110.0051No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_PROTEIN_SECRETION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_PROTEIN_SECRETION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_PROTEIN_SECRETION