DatasetGMP.GMP.mono_Pheno.cls
#Group1_versus_Group3.GMP.mono_Pheno.cls
#Group1_versus_Group3_repos
PhenotypeGMP.mono_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class2
GeneSetHALLMARK_INTERFERON_ALPHA_RESPONSE
Enrichment Score (ES)-0.3652554
Normalized Enrichment Score (NES)-1.0952588
Nominal p-value0.39019608
FDR q-value0.70090157
FWER p-Value0.964
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Mx25040.5730.0086No
2Cmtr120180.367-0.0364No
3Ifit222970.345-0.0301No
4Ifih132620.277-0.0565No
5Trim2533120.274-0.0442No
6Parp1434390.266-0.0356No
7Ddx6035040.263-0.0245No
8Trafd137980.248-0.0239No
9Trim12c39860.239-0.0194No
10Helz241150.232-0.0126No
11Tdrd744030.222-0.0132No
12Eif2ak247160.210-0.0154No
13Il750300.197-0.0184No
14Il1552840.189-0.0192No
15Irf955120.180-0.0194No
16Cxcl1057620.171-0.0210No
17Ogfr73890.116-0.0840No
18Ncoa775270.112-0.0840No
19Parp976830.107-0.0849No
20Ifit378010.104-0.0844No
21Nub180370.097-0.0893No
22Pnpt181780.093-0.0904No
23Isg1581840.092-0.0858No
24Mov1087720.075-0.1068No
25Oasl191680.063-0.1203No
26Ifi4491820.063-0.1175No
27Parp1292600.061-0.1176No
28Epsti199180.041-0.1433No
29Herc6100960.035-0.1490No
30Gbp3103430.028-0.1580No
31Slc25a28104380.025-0.1607No
32Tent5a105460.022-0.1641No
33Adar108620.013-0.1768No
34Rnf31109930.009-0.1818No
35Psme2113000.000-0.1948No
36Trim2611460-0.001-0.2015No
37Cmpk211470-0.001-0.2019No
38Cnp11738-0.009-0.2127No
39Usp1811820-0.012-0.2155No
40Irf112166-0.022-0.2290No
41Sp11012685-0.037-0.2491No
42Txnip12765-0.039-0.2504No
43Oas1a12847-0.041-0.2517No
44Trim1413062-0.048-0.2583No
45Stat213194-0.052-0.2612No
46Casp813249-0.054-0.2606No
47Irf713694-0.068-0.2759No
48Wars113727-0.069-0.2736No
49Plscr115146-0.115-0.3279No
50Elf115481-0.127-0.3354No
51Sell15768-0.136-0.3404No
52Irf216227-0.153-0.3518No
53Casp116308-0.155-0.3471No
54Nmi16588-0.166-0.3503No
55Ripk216942-0.176-0.3560Yes
56Ifi3516946-0.177-0.3469Yes
57Tap117013-0.179-0.3403Yes
58Cd7417324-0.191-0.3435Yes
59Lamp317448-0.195-0.3384Yes
60Rsad217468-0.196-0.3290Yes
61Cd4718041-0.220-0.3417Yes
62Tmem14018594-0.246-0.3523Yes
63Lpar618685-0.250-0.3430Yes
64Gmpr18782-0.254-0.3337Yes
65Ube2l618838-0.255-0.3227Yes
66Csf118962-0.261-0.3142Yes
67Uba719145-0.269-0.3078Yes
68Il4ra19460-0.281-0.3064Yes
69Psma319690-0.293-0.3008Yes
70Isg2019747-0.295-0.2877Yes
71Ifitm119847-0.300-0.2762Yes
72Ifitm219904-0.303-0.2627Yes
73Lap319912-0.303-0.2471Yes
74Psmb820190-0.318-0.2421Yes
75Dhx5820278-0.323-0.2289Yes
76Ifitm320376-0.328-0.2158Yes
77Trim2120425-0.331-0.2004Yes
78Psme120527-0.337-0.1870Yes
79Ifi2720717-0.349-0.1767Yes
80Ifi3020900-0.362-0.1654Yes
81Samd9l21086-0.373-0.1538Yes
82Bst221666-0.417-0.1565Yes
83Psmb921937-0.443-0.1447Yes
84B2m22024-0.448-0.1249Yes
85Mvb12a22116-0.458-0.1047Yes
86Lgals3bp22132-0.459-0.0812Yes
87Procr22218-0.467-0.0603Yes
88Batf222378-0.485-0.0416Yes
89Ly6e22635-0.520-0.0252Yes
90Rtp422637-0.5200.0020Yes
91Ccrl223440-0.7600.0078Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_ALPHA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_ALPHA_RESPONSE