DatasetGMP.GMP.mono_Pheno.cls
#Group1_versus_Group3.GMP.mono_Pheno.cls
#Group1_versus_Group3_repos
PhenotypeGMP.mono_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class2
GeneSetHALLMARK_INFLAMMATORY_RESPONSE
Enrichment Score (ES)-0.29427338
Normalized Enrichment Score (NES)-1.1991259
Nominal p-value0.18548387
FDR q-value0.59343946
FWER p-Value0.894
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INFLAMMATORY_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Nlrp36170.548-0.0126No
2Tnfaip610210.473-0.0179No
3Mefv10740.464-0.0085No
4Gp1ba11810.445-0.0019No
5Hrh114530.414-0.0031No
6Tnfrsf1b14660.4130.0067No
7Lcp216440.3940.0090No
8Il1b16700.3910.0177No
9Ccl2417420.3860.0244No
10Kif1b19040.3730.0268No
11Il1820020.3690.0319No
12Ebi320410.3650.0394No
13Met20680.3620.0474No
14Cd1421870.3520.0511No
15Rnf144b22750.3470.0561No
16Tacr125300.3230.0534No
17Abca125520.3210.0605No
18Sgms228950.2980.0534No
19Itgb332340.2780.0460No
20Adgre133130.2740.0495No
21Hpn35960.2580.0439No
22Atp2b137720.2490.0427No
23Raf137960.2480.0479No
24Gnai340000.2380.0452No
25Scarf140600.2350.0486No
26Sphk141180.2320.0520No
27Pvr41750.2310.0553No
28Acvr2a42430.2300.0582No
29Slc11a243300.2260.0602No
30Kcnj243990.2220.0629No
31Eif2ak247160.2100.0546No
32Gpc348360.2050.0547No
33Chst248550.2040.0590No
34Irak249530.2010.0599No
35Clec5a49980.1990.0630No
36Hbegf50760.1950.0646No
37Slc4a450950.1940.0687No
38Btg251900.1930.0695No
39Nampt52120.1920.0734No
40Itga552280.1910.0776No
41Il1552840.1890.0800No
42Ptgir55230.1800.0743No
43Tnfsf1555390.1790.0782No
44Cxcl1057620.1710.0730No
45Tlr260480.1600.0648No
46Psen162610.1520.0596No
47Pik3r567270.1360.0432No
48Hif1a67610.1350.0451No
49Klf672000.1210.0295No
50Tlr172660.1180.0297No
51P2rx772930.1180.0315No
52Plaur78480.1030.0105No
53Adora2b79260.1000.0097No
54Osmr81470.0930.0027No
55Kcnmb281560.0930.0046No
56Nod285270.083-0.0091No
57Tnfsf1088400.073-0.0205No
58Lyn89230.070-0.0223No
59Slc7a290730.066-0.0270No
60Abi192560.061-0.0332No
61Slc1a294160.056-0.0386No
62Atp2c194330.056-0.0379No
63Ifnar194640.054-0.0378No
64Atp2a2103900.026-0.0766No
65Il7r105730.021-0.0838No
66Gna15105840.021-0.0837No
67Il10ra107020.018-0.0883No
68Tapbp107160.017-0.0884No
69P2rx4108070.015-0.0919No
70Dcbld2112550.001-0.1109No
71Il15ra112620.001-0.1111No
72Itgb8113140.000-0.1133No
73Axl11513-0.002-0.1217No
74Ifngr211542-0.003-0.1228No
75Acvr1b11885-0.014-0.1370No
76Olr111933-0.016-0.1386No
77Pcdh711948-0.016-0.1388No
78Sele11970-0.016-0.1393No
79Ccr712057-0.019-0.1425No
80Irf112166-0.022-0.1465No
81Ahr12183-0.023-0.1467No
82Slamf112272-0.025-0.1498No
83Csf3r12278-0.025-0.1494No
84Ros112395-0.029-0.1536No
85Rgs1612492-0.031-0.1569No
86Mxd112833-0.041-0.1704No
87Cd8212943-0.044-0.1739No
88Slc31a213013-0.047-0.1757No
89Icosl13682-0.068-0.2025No
90Irf713694-0.068-0.2012No
91Il1013785-0.071-0.2033No
92Fzd513820-0.072-0.2029No
93Ptafr13935-0.075-0.2059No
94Pdpn14220-0.084-0.2159No
95Cybb14546-0.095-0.2274No
96Ccl514816-0.104-0.2363No
97Slc31a115090-0.113-0.2451No
98Nfkb115415-0.124-0.2558No
99Cd6915440-0.125-0.2537No
100Inhba15617-0.131-0.2579No
101Tacr315626-0.132-0.2549No
102Timp115721-0.135-0.2556No
103Sell15768-0.136-0.2541No
104Cxcr615785-0.137-0.2514No
105Mmp1415957-0.144-0.2551No
106Icam115994-0.145-0.2530No
107Osm16069-0.147-0.2525No
108Best116410-0.159-0.2630No
109Nmi16588-0.166-0.2664No
110Kcna316602-0.166-0.2628No
111Ripk216942-0.176-0.2728No
112Ptpre17214-0.186-0.2797No
113Ldlr17252-0.187-0.2766No
114Lamp317448-0.195-0.2801No
115Slc28a217485-0.196-0.2767No
116Slc7a117563-0.200-0.2750No
117Rela17758-0.209-0.2780No
118Cx3cl117847-0.211-0.2765No
119Lpar118071-0.222-0.2804No
120Aplnr18264-0.232-0.2828No
121Il2rb18333-0.235-0.2798No
122Rhog18365-0.236-0.2753No
123Ptger218812-0.254-0.2879Yes
124Csf118962-0.261-0.2877Yes
125Nfkbia18965-0.261-0.2813Yes
126Sri19007-0.263-0.2765Yes
127Scn1b19055-0.265-0.2718Yes
128Ffar219269-0.272-0.2741Yes
129Gpr13219275-0.272-0.2675Yes
130Il18r119323-0.275-0.2626Yes
131Il4ra19460-0.281-0.2614Yes
132F319670-0.292-0.2630Yes
133Il1r119724-0.293-0.2579Yes
134Adrm119815-0.298-0.2543Yes
135Ifitm119847-0.300-0.2482Yes
136Cd4819883-0.301-0.2421Yes
137P2ry220026-0.309-0.2404Yes
138Calcrl20058-0.311-0.2340Yes
139Gch120137-0.315-0.2294Yes
140Cmklr120154-0.316-0.2222Yes
141Msr120272-0.323-0.2191Yes
142Lck20297-0.324-0.2120Yes
143Sema4d20338-0.326-0.2056Yes
144Tnfsf920556-0.339-0.2064Yes
145Il18rap20898-0.362-0.2118Yes
146Cdkn1a21058-0.372-0.2093Yes
147Emp321238-0.382-0.2074Yes
148Nmur121316-0.388-0.2009Yes
149Tnfrsf921434-0.396-0.1960Yes
150Gabbr121649-0.415-0.1948Yes
151Bst221666-0.417-0.1850Yes
152Pde4b21881-0.437-0.1832Yes
153Lif22045-0.451-0.1789Yes
154Rgs122246-0.470-0.1757Yes
155Selenos22338-0.480-0.1675Yes
156Ly6e22635-0.520-0.1672Yes
157Rtp422637-0.520-0.1542Yes
158Ptger422695-0.530-0.1434Yes
159Cd4022762-0.540-0.1327Yes
160Gpr18322876-0.560-0.1235Yes
161Aqp922962-0.575-0.1127Yes
162Myc22987-0.581-0.0992Yes
163Rasgrp123021-0.587-0.0859Yes
164Npffr223129-0.617-0.0750Yes
165Tlr323366-0.705-0.0675Yes
166Ccrl223440-0.760-0.0515Yes
167Stab123553-0.892-0.0340Yes
168Icam423621-1.4790.0001Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INFLAMMATORY_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INFLAMMATORY_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INFLAMMATORY_RESPONSE