Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	GMP.GMP.mono_Pheno.cls #Group1_versus_Group3.GMP.mono_Pheno.cls #Group1_versus_Group3_repos
Phenotype	GMP.mono_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	0
GeneSet	HALLMARK_HYPOXIA
Enrichment Score (ES)	0.19390872
Normalized Enrichment Score (NES)	0.8273187
Nominal p-value	0.8111332
FDR q-value	0.9399273
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Vegfa	24	1.024	0.0238	Yes
2	Bhlhe40	186	0.729	0.0347	Yes
3	Cav1	319	0.649	0.0448	Yes
4	Fos	365	0.629	0.0581	Yes
5	Dusp1	450	0.593	0.0689	Yes
6	Cavin1	464	0.587	0.0826	Yes
7	Sdc2	479	0.579	0.0961	Yes
8	Plin2	596	0.552	0.1045	Yes
9	Hs3st1	654	0.541	0.1152	Yes
10	Tgfbi	768	0.521	0.1230	Yes
11	Pgk1	829	0.508	0.1328	Yes
12	Dtna	982	0.481	0.1380	Yes
13	Btg1	1119	0.457	0.1433	Yes
14	Kdelr3	1121	0.457	0.1543	Yes
15	Ak4	1298	0.430	0.1573	Yes
16	Jun	1354	0.424	0.1652	Yes
17	Phkg1	1755	0.384	0.1575	Yes
18	Kdm3a	1761	0.384	0.1666	Yes
19	Pgam2	2256	0.349	0.1540	Yes
20	Hdlbp	2332	0.342	0.1591	Yes
21	Atf3	2446	0.331	0.1623	Yes
22	Stc2	2494	0.326	0.1682	Yes
23	Fosl2	2603	0.319	0.1714	Yes
24	Cdkn1b	2626	0.318	0.1781	Yes
25	Gapdhs	2636	0.317	0.1854	Yes
26	Sap30	2822	0.303	0.1849	Yes
27	Eno3	3031	0.291	0.1831	Yes
28	Myh9	3087	0.287	0.1877	Yes
29	Slc2a5	3286	0.275	0.1860	Yes
30	Bnip3l	3633	0.256	0.1774	Yes
31	Ero1a	3648	0.255	0.1830	Yes
32	Rragd	3683	0.254	0.1877	Yes
33	Mxi1	3709	0.252	0.1928	Yes
34	Hk2	3851	0.246	0.1927	Yes
35	Noct	3961	0.240	0.1939	Yes
36	B4galnt2	4327	0.226	0.1838	No
37	Foxo3	4799	0.207	0.1688	No
38	Gpc3	4836	0.205	0.1722	No
39	Pfkp	4842	0.205	0.1769	No
40	Chst2	4855	0.204	0.1814	No
41	P4ha1	5089	0.195	0.1762	No
42	Gpi1	5511	0.180	0.1626	No
43	Gck	5559	0.178	0.1649	No
44	Jmjd6	5567	0.178	0.1689	No
45	Map3k1	5749	0.171	0.1654	No
46	Ext1	5804	0.169	0.1672	No
47	Tpd52	5998	0.162	0.1629	No
48	Gys1	6086	0.158	0.1630	No
49	Hk1	6307	0.150	0.1572	No
50	Slc37a4	6751	0.135	0.1416	No
51	Hmox1	6783	0.134	0.1436	No
52	Rbpj	6908	0.130	0.1415	No
53	Ccng2	6941	0.129	0.1432	No
54	Nedd4l	7188	0.121	0.1357	No
55	Klf6	7200	0.121	0.1382	No
56	Siah2	7534	0.112	0.1267	No
57	Nr3c1	7549	0.112	0.1288	No
58	Tgfb3	7685	0.107	0.1256	No
59	Ndst1	7726	0.107	0.1265	No
60	Plaur	7848	0.103	0.1239	No
61	Zfp36	7896	0.101	0.1243	No
62	Irs2	7917	0.101	0.1259	No
63	Adora2b	7926	0.100	0.1280	No
64	Gpc1	7949	0.099	0.1295	No
65	Casp6	8138	0.094	0.1237	No
66	Pfkfb3	8720	0.077	0.1008	No
67	Ppp1r15a	9010	0.067	0.0901	No
68	Wsb1	9245	0.062	0.0816	No
69	Tpst2	9522	0.053	0.0711	No
70	Tnfaip3	9541	0.052	0.0716	No
71	Large1	9692	0.047	0.0664	No
72	P4ha2	10146	0.034	0.0479	No
73	Klhl24	10257	0.030	0.0439	No
74	Gbe1	10310	0.029	0.0424	No
75	Pdk1	10317	0.029	0.0428	No
76	Pdk3	10429	0.025	0.0387	No
77	Klf7	10963	0.010	0.0162	No
78	Ppfia4	11045	0.007	0.0130	No
79	Zfp292	11276	0.001	0.0032	No
80	Errfi1	11284	0.000	0.0029	No
81	Atp7a	11299	0.000	0.0023	No
82	Ugp2	11483	-0.001	-0.0055	No
83	Ids	11683	-0.008	-0.0138	No
84	Ddit4	12460	-0.031	-0.0461	No
85	Sdc3	12644	-0.035	-0.0531	No
86	Pam	12664	-0.036	-0.0530	No
87	Xpnpep1	12702	-0.037	-0.0537	No
88	Nagk	12993	-0.046	-0.0649	No
89	Tiparp	13263	-0.055	-0.0751	No
90	Kif5a	13397	-0.059	-0.0793	No
91	Pnrc1	13474	-0.061	-0.0811	No
92	Vhl	13509	-0.063	-0.0810	No
93	Rora	13782	-0.071	-0.0909	No
94	Pgm1	13800	-0.072	-0.0899	No
95	Ankzf1	13861	-0.073	-0.0906	No
96	Csrp2	13915	-0.075	-0.0911	No
97	Pim1	13948	-0.075	-0.0906	No
98	Fam162a	13988	-0.077	-0.0904	No
99	Scarb1	14013	-0.078	-0.0896	No
100	Hexa	14193	-0.083	-0.0952	No
101	Efna1	14232	-0.085	-0.0947	No
102	Ets1	14532	-0.094	-0.1052	No
103	Hspa5	14584	-0.096	-0.1050	No
104	Mt1	15337	-0.121	-0.1342	No
105	Slc2a3	15376	-0.123	-0.1328	No
106	Akap12	15387	-0.123	-0.1303	No
107	Slc6a6	15522	-0.128	-0.1329	No
108	Lox	15529	-0.128	-0.1300	No
109	Pklr	15618	-0.131	-0.1306	No
110	Aldoa	15756	-0.136	-0.1331	No
111	Cxcr4	15827	-0.138	-0.1328	No
112	Tpi1	15834	-0.138	-0.1297	No
113	Aldoc	16105	-0.149	-0.1376	No
114	Grhpr	16313	-0.155	-0.1426	No
115	Selenbp1	16403	-0.159	-0.1426	No
116	Cdkn1c	16572	-0.165	-0.1457	No
117	Tes	16591	-0.166	-0.1425	No
118	Ndst2	16643	-0.167	-0.1406	No
119	Pgm2	17316	-0.190	-0.1646	No
120	Bcl2	17387	-0.193	-0.1629	No
121	Gaa	17552	-0.199	-0.1651	No
122	Col5a1	17580	-0.200	-0.1614	No
123	Egfr	17585	-0.200	-0.1567	No
124	Ndrg1	17644	-0.203	-0.1542	No
125	Slc2a1	17670	-0.204	-0.1503	No
126	Cp	17681	-0.205	-0.1458	No
127	Gpc4	18030	-0.220	-0.1553	No
128	Eno2	18153	-0.226	-0.1550	No
129	Eno1b	18268	-0.232	-0.1542	No
130	Sdc4	18403	-0.238	-0.1542	No
131	Stbd1	18533	-0.243	-0.1538	No
132	Pfkl	18553	-0.244	-0.1487	No
133	Ppargc1a	18583	-0.245	-0.1440	No
134	Cavin3	18942	-0.260	-0.1529	No
135	Nfil3	19043	-0.264	-0.1508	No
136	Tmem45a	19236	-0.272	-0.1524	No
137	Anxa2	19387	-0.279	-0.1520	No
138	Glrx	19494	-0.283	-0.1496	No
139	Vldlr	19572	-0.287	-0.1460	No
140	Fbp1	19617	-0.289	-0.1408	No
141	F3	19670	-0.292	-0.1360	No
142	Isg20	19747	-0.295	-0.1320	No
143	Lxn	19778	-0.296	-0.1261	No
144	Ampd3	19908	-0.303	-0.1243	No
145	S100a4	19968	-0.306	-0.1194	No
146	Gcnt2	19976	-0.306	-0.1122	No
147	Ilvbl	20055	-0.310	-0.1080	No
148	Tgm2	20066	-0.311	-0.1009	No
149	Pdgfb	20102	-0.313	-0.0948	No
150	Car12	20675	-0.347	-0.1108	No
151	Bgn	21028	-0.369	-0.1168	No
152	Ldhc	21051	-0.371	-0.1087	No
153	Cdkn1a	21058	-0.372	-0.1000	No
154	Slc25a1	21323	-0.389	-0.1018	No
155	Dcn	21370	-0.392	-0.0942	No
156	Sult2b1	21408	-0.395	-0.0862	No
157	Tktl1	21423	-0.396	-0.0772	No
158	Plac8	21496	-0.401	-0.0706	No
159	B3galt6	21588	-0.410	-0.0645	No
160	Ldha	21830	-0.434	-0.0643	No
161	Cited2	21837	-0.434	-0.0540	No
162	Maff	21998	-0.447	-0.0500	No
163	Prdx5	22056	-0.452	-0.0414	No
164	Pygm	22285	-0.475	-0.0396	No
165	Mif	22513	-0.501	-0.0371	No
166	Prkca	22516	-0.501	-0.0251	No
167	Ddit3	22620	-0.517	-0.0169	No
168	Angptl4	22625	-0.518	-0.0045	No
169	Galk1	22784	-0.546	0.0020	No
170	Ier3	23057	-0.595	0.0048	No
171	Chst3	23486	-0.795	0.0059	No