DatasetGMP.GMP.mono_Pheno.cls
#Group1_versus_Group2.GMP.mono_Pheno.cls
#Group1_versus_Group2_repos
PhenotypeGMP.mono_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class1
GeneSetHALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY
Enrichment Score (ES)-0.4179706
Normalized Enrichment Score (NES)-1.5862783
Nominal p-value0.01764706
FDR q-value0.071181074
FWER p-Value0.265
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Mgst127810.361-0.0861No
2Fes29630.349-0.0631No
3Msra35600.310-0.0610No
4Mpo39260.287-0.0512No
5Gpx440790.278-0.0331No
6Ipcef153580.217-0.0681No
7Txnrd258270.200-0.0703No
8Stk2565230.172-0.0846No
9Mbp75660.136-0.1168No
10Lamtor575820.136-0.1054No
11Gpx386470.099-0.1418No
12Scaf489550.090-0.1469No
13Ercc295160.072-0.1642No
14G6pdx105550.039-0.2048No
15Atox1113060.015-0.2353No
16Hhex12316-0.014-0.2768No
17Gsr13035-0.036-0.3041No
18Lsp113336-0.046-0.3128No
19Abcc113992-0.066-0.3347No
20Egln214226-0.073-0.3381No
21Glrx214349-0.077-0.3365No
22Prdx614565-0.083-0.3383No
23Cat14570-0.083-0.3311No
24Ptpa14655-0.086-0.3271No
25Prdx415110-0.102-0.3374No
26Sbno215505-0.115-0.3439No
27Hmox216023-0.132-0.3543No
28Nqo116176-0.137-0.3487No
29Glrx16805-0.159-0.3613No
30Gclc17691-0.192-0.3819No
31Ndufa618460-0.223-0.3948No
32Ndufs219007-0.245-0.3964Yes
33Junb19161-0.253-0.3806Yes
34Sod219330-0.261-0.3647Yes
35Cdkn2d19572-0.274-0.3508Yes
36Pdlim119809-0.284-0.3357Yes
37Oxsr120046-0.296-0.3196Yes
38Txnrd120550-0.324-0.3124Yes
39Prdx220888-0.345-0.2963Yes
40Pfkp20889-0.345-0.2659Yes
41Sod122165-0.441-0.2811Yes
42Prnp22291-0.456-0.2461Yes
43Ftl122605-0.496-0.2156Yes
44Selenos22661-0.502-0.1737Yes
45Txn122742-0.516-0.1316Yes
46Prdx122911-0.542-0.0909Yes
47Srxn123349-0.662-0.0511Yes
48Gclm23442-0.7110.0077Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY