DatasetGMP.GMP.mono_Pheno.cls
#Group1_versus_Group2.GMP.mono_Pheno.cls
#Group1_versus_Group2_repos
PhenotypeGMP.mono_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class1
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.4846588
Normalized Enrichment Score (NES)-1.605084
Nominal p-value0.0295858
FDR q-value0.07524097
FWER p-Value0.246
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Marchf111990.505-0.0392No
2Auts219640.419-0.0619No
3Lcp223950.388-0.0711No
4Stat426810.367-0.0746No
5St3gal531200.338-0.0853No
6Cd27433540.323-0.0876No
7Lats236990.300-0.0952No
8Il1538650.290-0.0954No
9Pml39470.286-0.0921No
10Irf545060.257-0.1098No
11Btg146540.248-0.1102No
12Ifit256620.204-0.1483No
13Tnfaip662960.181-0.1711No
14Irf863000.181-0.1669No
15Trafd163190.180-0.1634No
16Cfh63820.178-0.1619No
17Trim1464570.175-0.1609No
18Epsti164840.174-0.1579No
19Rapgef667130.164-0.1638No
20Rbck170360.154-0.1739No
21Cfb72500.147-0.1795No
22H2-Aa76990.132-0.1955No
23Tnfaip277780.129-0.1958No
24Txnip81250.117-0.2078No
25Jak281660.115-0.2067No
26Nfkb181990.114-0.2054No
27Tnfaip382690.112-0.2057No
28Nfkbia85380.103-0.2147No
29Casp888070.095-0.2239No
30Irf288410.094-0.2231No
31Ptgs288750.093-0.2223No
32Cxcl1089560.090-0.2236No
33Gpr1892530.081-0.2343No
34Tapbp93680.077-0.2374No
35Il10ra93800.076-0.2360No
36Cmtr195300.072-0.2407No
37Gch195580.071-0.2402No
38Arid5b98970.060-0.2532No
39Casp799270.059-0.2530No
40Ifnar2102400.050-0.2651No
41Samhd1106050.038-0.2798No
42Il2rb107100.034-0.2834No
43Tnfsf10107560.033-0.2845No
44Ddx60107900.032-0.2852No
45St8sia4108030.032-0.2849No
46Pde4b112660.017-0.3042No
47Ifi27113200.015-0.3061No
48Il18bp113910.013-0.3088No
49Eif4e3115080.009-0.3136No
50Batf2115800.008-0.3164No
51Rnf31116100.007-0.3175No
52Slc25a2811919-0.001-0.3306No
53Bank111945-0.002-0.3316No
54Ripk111953-0.002-0.3318No
55Casp412166-0.009-0.3407No
56Mx212219-0.011-0.3426No
57Ncoa312260-0.012-0.3440No
58Sri12324-0.014-0.3464No
59Ifit312755-0.027-0.3641No
60Ube2l612830-0.029-0.3665No
61Nod112868-0.031-0.3674No
62Sectm1a13136-0.040-0.3778No
63Herc613141-0.040-0.3771No
64Psme213234-0.042-0.3800No
65Cmpk213328-0.045-0.3829No
66Stat113608-0.054-0.3935No
67Trim2613720-0.058-0.3969No
68Fas13834-0.062-0.4002No
69Isg2013839-0.062-0.3990No
70Tdrd713895-0.064-0.3998No
71Bpgm14004-0.067-0.4028No
72Stat214056-0.068-0.4034No
73H2-DMa14234-0.073-0.4092No
74Usp1814483-0.081-0.4179No
75Hif1a14606-0.085-0.4211No
76Vamp514647-0.086-0.4208No
77Slamf714870-0.093-0.4281No
78Znfx114890-0.093-0.4267No
79Vamp814975-0.097-0.4280No
80Adar15134-0.102-0.4323No
81Nmi15386-0.111-0.4404No
82Wars115449-0.113-0.4404No
83Peli115491-0.115-0.4394No
84Serping115571-0.118-0.4400No
85Sspn15763-0.124-0.4452No
86Xaf116060-0.133-0.4547No
87Ptpn216072-0.133-0.4520No
88Casp316100-0.134-0.4500No
89Cd4016182-0.137-0.4503No
90Sp11016188-0.137-0.4472No
91Pnp16197-0.137-0.4443No
92Fgl216643-0.153-0.4597No
93Ifi3516688-0.154-0.4579No
94Irf416690-0.154-0.4543No
95Tap116768-0.158-0.4539No
96Eif2ak216859-0.161-0.4540No
97Irf917053-0.168-0.4582No
98Psmb917093-0.169-0.4559No
99Ptpn617191-0.173-0.4560No
100Nup9317215-0.174-0.4528No
101Trim2517636-0.190-0.4663No
102Psmb217665-0.191-0.4630No
103Pnpt117703-0.192-0.4600No
104Tor1b17711-0.192-0.4558No
105Socs117725-0.193-0.4518No
106Dhx5817732-0.193-0.4475No
107Rnf21317794-0.197-0.4454No
108Psma218715-0.232-0.4792Yes
109Casp118731-0.232-0.4743Yes
110Il718923-0.241-0.4768Yes
111Sppl2a18937-0.242-0.4717Yes
112Helz219043-0.247-0.4703Yes
113Isg1519213-0.255-0.4715Yes
114Ifi4419215-0.255-0.4655Yes
115Vcam119297-0.259-0.4629Yes
116Sod219330-0.261-0.4581Yes
117Ifih119375-0.264-0.4537Yes
118Arl4a19395-0.265-0.4483Yes
119Psma319447-0.268-0.4441Yes
120Psmb819489-0.270-0.4395Yes
121Nampt19568-0.274-0.4364Yes
122Irf719598-0.276-0.4311Yes
123Il15ra19651-0.277-0.4268Yes
124Mvp19697-0.280-0.4221Yes
125Ogfr19755-0.281-0.4179Yes
126Rsad219811-0.284-0.4135Yes
127Ripk220009-0.294-0.4150Yes
128Zbp120069-0.298-0.4105Yes
129Bst220138-0.302-0.4062Yes
130Isoc120462-0.318-0.4125Yes
131Pla2g4a20501-0.321-0.4066Yes
132Irf120700-0.333-0.4071Yes
133Parp1420827-0.340-0.4045Yes
134Ccl520833-0.341-0.3967Yes
135Oasl120866-0.343-0.3899Yes
136Pfkp20889-0.345-0.3827Yes
137Ciita20943-0.348-0.3768Yes
138Cd7420968-0.350-0.3695Yes
139Itgb721049-0.354-0.3646Yes
140Cd6921139-0.360-0.3599Yes
141Rtp421170-0.363-0.3526Yes
142Psme121295-0.372-0.3491Yes
143Gbp321297-0.372-0.3404Yes
144Ptpn121363-0.377-0.3342Yes
145Plscr121385-0.379-0.3262Yes
146Ly6e21496-0.386-0.3218Yes
147Nlrc521521-0.387-0.3137Yes
148Cdkn1a21542-0.388-0.3054Yes
149Oas321658-0.396-0.3009Yes
150Trim2121675-0.398-0.2922Yes
151Lysmd221964-0.422-0.2946Yes
152Stat322189-0.444-0.2936Yes
153Samd9l22196-0.445-0.2834Yes
154Lgals3bp22282-0.455-0.2763Yes
155Mthfd222332-0.461-0.2675Yes
156Rigi22557-0.489-0.2655Yes
157B2m22580-0.492-0.2548Yes
158Ifitm322658-0.502-0.2463Yes
159Lap322711-0.510-0.2364Yes
160Cd3822713-0.511-0.2244Yes
161Socs322725-0.513-0.2128Yes
162Ifitm222802-0.525-0.2037Yes
163Il4ra23072-0.574-0.2016Yes
164P2ry1423091-0.579-0.1887Yes
165Parp1223137-0.591-0.1767Yes
166Psmb1023208-0.609-0.1653Yes
167Ifi3023292-0.642-0.1537Yes
168Ido123334-0.657-0.1399Yes
169Pim123342-0.660-0.1247Yes
170Oas223371-0.678-0.1098Yes
171Selp23476-0.735-0.0969Yes
172Cmklr123526-0.798-0.0802Yes
173Myd8823534-0.803-0.0616Yes
174Icam123544-0.822-0.0425Yes
175Fcgr123600-0.942-0.0227Yes
176Cd8623613-1.0020.0005Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE