Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	GMP.GMP.mono_Pheno.cls #Group1_versus_Group2.GMP.mono_Pheno.cls #Group1_versus_Group2_repos
Phenotype	GMP.mono_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	1
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.3495062
Normalized Enrichment Score (NES)	-1.4171966
Nominal p-value	0.010162601
FDR q-value	0.12891401
FWER p-Value	0.518

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	F8	8	1.263	0.0287	No
2	Kcnip3	165	0.798	0.0404	No
3	Pdgfb	748	0.580	0.0289	No
4	Serpinb2	1045	0.529	0.0284	No
5	Gzmb	1109	0.518	0.0376	No
6	L3mbtl4	1322	0.485	0.0397	No
7	Ehd1	1406	0.476	0.0471	No
8	Cpq	1795	0.432	0.0405	No
9	Gp1ba	1875	0.426	0.0469	No
10	Cda	1890	0.425	0.0561	No
11	F2	2309	0.393	0.0473	No
12	Lcp2	2395	0.388	0.0526	No
13	Ctso	2723	0.365	0.0471	No
14	Brpf3	2795	0.359	0.0523	No
15	Pik3cg	2804	0.358	0.0602	No
16	Notch4	2922	0.351	0.0632	No
17	Dusp6	2965	0.348	0.0695	No
18	Fn1	3190	0.333	0.0675	No
19	Cpm	3218	0.331	0.0740	No
20	C2	3566	0.310	0.0663	No
21	Zeb1	4687	0.247	0.0243	No
22	Dock10	5110	0.228	0.0115	No
23	Akap10	5233	0.222	0.0114	No
24	Phex	5255	0.221	0.0156	No
25	Prkcd	5261	0.221	0.0204	No
26	Plaur	5359	0.217	0.0213	No
27	Lta4h	5742	0.203	0.0097	No
28	Itgam	5862	0.198	0.0091	No
29	Apoc1	5869	0.198	0.0134	No
30	Src	6132	0.188	0.0066	No
31	Pcsk9	6203	0.184	0.0078	No
32	Cfh	6382	0.178	0.0043	No
33	Pdp1	7231	0.147	-0.0284	No
34	Cfb	7250	0.147	-0.0258	No
35	Cd46	7272	0.146	-0.0234	No
36	Spock2	7579	0.136	-0.0333	No
37	Sh2b3	7606	0.135	-0.0313	No
38	Fcer1g	7672	0.133	-0.0310	No
39	Usp8	7848	0.127	-0.0356	No
40	C3	7866	0.126	-0.0334	No
41	Pclo	8050	0.119	-0.0384	No
42	Psen1	8059	0.119	-0.0361	No
43	Fcnb	8108	0.117	-0.0354	No
44	Jak2	8166	0.115	-0.0352	No
45	Tnfaip3	8269	0.112	-0.0370	No
46	Dpp4	8327	0.110	-0.0369	No
47	Gp9	8551	0.102	-0.0440	No
48	Olr1	8611	0.100	-0.0442	No
49	Dock4	8634	0.100	-0.0429	No
50	Cblb	8756	0.096	-0.0458	No
51	Pla2g7	8761	0.096	-0.0438	No
52	Irf2	8841	0.094	-0.0450	No
53	Gng2	8874	0.093	-0.0442	No
54	Lyn	9107	0.085	-0.0522	No
55	Raf1	9109	0.085	-0.0502	No
56	Ang	9181	0.083	-0.0514	No
57	Pik3ca	9282	0.080	-0.0538	No
58	Was	9415	0.075	-0.0577	No
59	Hspa1a	9757	0.065	-0.0707	No
60	Sirt6	9794	0.064	-0.0708	No
61	Casp7	9927	0.059	-0.0751	No
62	Timp2	10249	0.049	-0.0876	No
63	Me1	10348	0.047	-0.0907	No
64	Plek	10917	0.029	-0.1143	No
65	Grb2	10982	0.026	-0.1164	No
66	Atox1	11306	0.015	-0.1298	No
67	Kynu	11682	0.005	-0.1457	No
68	Ctsh	12088	-0.007	-0.1628	No
69	Stx4a	12096	-0.007	-0.1630	No
70	Cd36	12140	-0.008	-0.1646	No
71	Casp4	12166	-0.009	-0.1655	No
72	Dgkh	12196	-0.010	-0.1665	No
73	Xpnpep1	12251	-0.012	-0.1685	No
74	Usp15	12257	-0.012	-0.1684	No
75	Serpinc1	12358	-0.015	-0.1723	No
76	Casp9	12430	-0.017	-0.1750	No
77	Dyrk2	12461	-0.018	-0.1758	No
78	Cdh13	12487	-0.019	-0.1764	No
79	Kif2a	12490	-0.019	-0.1761	No
80	Rnf4	12598	-0.022	-0.1801	No
81	Maff	12688	-0.025	-0.1834	No
82	Prcp	12865	-0.031	-0.1902	No
83	Prdm4	12884	-0.031	-0.1902	No
84	S100a13	12892	-0.032	-0.1898	No
85	F10	12897	-0.032	-0.1892	No
86	Csrp1	13114	-0.039	-0.1975	No
87	Gnai3	13262	-0.043	-0.2028	No
88	Gnb4	13685	-0.057	-0.2195	No
89	Gmfb	13707	-0.058	-0.2191	No
90	Lipa	14042	-0.068	-0.2318	No
91	Gpd2	14135	-0.071	-0.2341	No
92	Plg	14580	-0.084	-0.2511	No
93	Scg3	14940	-0.095	-0.2642	No
94	Usp14	14953	-0.095	-0.2625	No
95	Msrb1	14956	-0.096	-0.2604	No
96	Dusp5	15011	-0.098	-0.2605	No
97	Rabif	15015	-0.098	-0.2583	No
98	F7	15300	-0.108	-0.2680	No
99	Fyn	15322	-0.109	-0.2663	No
100	Serping1	15571	-0.118	-0.2742	No
101	Ppp2cb	15586	-0.118	-0.2721	No
102	Rbsn	15696	-0.122	-0.2739	No
103	Rhog	15699	-0.123	-0.2712	No
104	Gnai2	15878	-0.127	-0.2759	No
105	Timp1	16047	-0.132	-0.2800	No
106	Casp3	16100	-0.134	-0.2791	No
107	Usp16	16169	-0.137	-0.2789	No
108	Vcpip1	16703	-0.155	-0.2981	No
109	F5	16763	-0.157	-0.2970	No
110	Fdx1	17045	-0.168	-0.3051	No
111	Psmb9	17093	-0.169	-0.3032	No
112	Mmp15	17180	-0.172	-0.3029	No
113	Hnf4a	17465	-0.184	-0.3108	No
114	Kcnip2	17530	-0.187	-0.3092	No
115	S100a9	17702	-0.192	-0.3121	No
116	Tmprss6	18236	-0.213	-0.3299	No
117	Mmp14	18336	-0.217	-0.3292	No
118	Gnb2	18478	-0.224	-0.3300	No
119	C1qc	18603	-0.229	-0.3301	No
120	Prep	18691	-0.231	-0.3285	No
121	Lgmn	18702	-0.231	-0.3236	No
122	Casp1	18731	-0.232	-0.3194	No
123	Ltf	18761	-0.234	-0.3153	No
124	Anxa5	18861	-0.239	-0.3140	No
125	Pik3r5	19257	-0.257	-0.3250	No
126	Pfn1	19324	-0.260	-0.3218	No
127	Irf7	19598	-0.276	-0.3271	No
128	Lrp1	19716	-0.281	-0.3256	No
129	Lamp2	20277	-0.308	-0.3424	Yes
130	Ctss	20305	-0.309	-0.3365	Yes
131	Pla2g4a	20501	-0.321	-0.3374	Yes
132	Mmp8	20630	-0.329	-0.3353	Yes
133	Irf1	20700	-0.333	-0.3306	Yes
134	Rce1	20793	-0.338	-0.3268	Yes
135	Ccl5	20833	-0.341	-0.3206	Yes
136	Gzmk	21027	-0.353	-0.3207	Yes
137	Calm1	21208	-0.365	-0.3200	Yes
138	Ctsb	21210	-0.366	-0.3116	Yes
139	Zfpm2	21222	-0.366	-0.3037	Yes
140	Cr2	21294	-0.372	-0.2982	Yes
141	Plscr1	21385	-0.379	-0.2933	Yes
142	Klkb1	21503	-0.386	-0.2894	Yes
143	F3	21572	-0.391	-0.2833	Yes
144	C9	21577	-0.391	-0.2745	Yes
145	Dgkg	21583	-0.391	-0.2657	Yes
146	Col4a2	21946	-0.421	-0.2715	Yes
147	Tfpi2	22017	-0.428	-0.2647	Yes
148	Dock9	22088	-0.434	-0.2577	Yes
149	Ppp4c	22091	-0.434	-0.2478	Yes
150	Ctsd	22215	-0.447	-0.2428	Yes
151	Calm3	22246	-0.451	-0.2337	Yes
152	Gata3	22447	-0.473	-0.2314	Yes
153	Actn2	22706	-0.509	-0.2306	Yes
154	Lap3	22711	-0.510	-0.2191	Yes
155	Lck	22799	-0.524	-0.2108	Yes
156	Cdk5r1	22834	-0.528	-0.2001	Yes
157	Prss36	22898	-0.541	-0.1903	Yes
158	Car2	23015	-0.561	-0.1824	Yes
159	Cp	23052	-0.570	-0.1708	Yes
160	Adam9	23128	-0.589	-0.1605	Yes
161	Gca	23150	-0.592	-0.1478	Yes
162	Lgals3	23264	-0.629	-0.1381	Yes
163	Hspa5	23275	-0.632	-0.1240	Yes
164	Pim1	23342	-0.660	-0.1117	Yes
165	Clu	23389	-0.683	-0.0979	Yes
166	Ctsc	23435	-0.707	-0.0836	Yes
167	Ctsl	23548	-0.831	-0.0693	Yes
168	Cebpb	23551	-0.834	-0.0502	Yes
169	Rasgrp1	23595	-0.923	-0.0308	Yes
170	Gngt2	23624	-1.395	0.0000	Yes