DatasetEosinophil.Eosinophil_Pheno.cls
#Group6_versus_Group8.Eosinophil_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeEosinophil_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class4
GeneSetHALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)0.30997413
Normalized Enrichment Score (NES)1.3224229
Nominal p-value0.09140768
FDR q-value0.50064445
FWER p-Value0.644
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_TNFA_SIGNALING_VIA_NFKB   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Vegfa161.0200.0328Yes
2Dusp1201.0020.0661Yes
3Trip101420.7000.0790Yes
4Mxd12560.6210.0899Yes
5Nfkbie3240.5930.1040Yes
6Tsc22d13250.5920.1238Yes
7Rhob3480.5830.1414Yes
8Pdlim54220.5570.1537Yes
9Junb4560.5450.1691Yes
10Rnf19b5360.5200.1797Yes
11Sod27480.4600.1767Yes
12Atp2b17490.4600.1921Yes
13Lamb37590.4580.2067Yes
14Rel10210.4120.1978Yes
15Fosl210500.4090.2090Yes
16Gadd45a11020.4030.2181Yes
17Pfkfb311440.3990.2279Yes
18Il6st11950.3900.2366Yes
19Ets214150.3610.2296Yes
20Rela14950.3520.2346Yes
21Btg215500.3450.2414Yes
22B4galt516720.3310.2420Yes
23Gch116830.3290.2521Yes
24Dnajb416970.3270.2620Yes
25Ier517320.3240.2698Yes
26Cd4419200.3010.2637Yes
27Fos19260.3010.2733Yes
28Cebpd19920.2940.2775Yes
29Ldlr20520.2880.2820Yes
30Smad320610.2870.2909Yes
31Klf1021880.2760.2892Yes
32Ier322270.2730.2950Yes
33Rcan123170.2650.2962Yes
34Map3k824880.2500.2897Yes
35Tap125750.2420.2904Yes
36Per126170.2380.2948Yes
37Ehd126720.2340.2979Yes
38Gpr18327330.2300.3004Yes
39Ifngr227640.2290.3054Yes
40Cflar28240.2230.3077Yes
41Sgk128840.2200.3100Yes
42Dennd5a30890.2020.2990No
43Birc331200.1990.3030No
44Fosb33280.1860.2913No
45Map2k334780.1720.2841No
46Tnfaip835430.1670.2841No
47Ptger435680.1650.2875No
48Ninj135830.1640.2918No
49Stat5a36030.1630.2956No
50Tgif136640.1590.2957No
51Zbtb1037040.1560.2975No
52Panx138310.1460.2914No
53Trib138380.1460.2958No
54Kdm6b38500.1450.2997No
55Cd6940580.1290.2860No
56Ier245560.0910.2458No
57Mcl147710.0740.2297No
58Ptpre47800.0740.2315No
59Cebpb48680.0670.2262No
60Irs249100.0650.2248No
61Plek49370.0630.2246No
62Olr149960.0590.2215No
63Dusp250080.0580.2225No
64Litaf50210.0570.2233No
65Jun51390.0500.2148No
66Irf152450.0430.2071No
67Slc16a654660.0240.1888No
68Tnip254830.0240.1882No
69Nfat558400.0000.1572No
70Pmepa158840.0000.1535No
71Zfp3658940.0000.1527No
72Tank6082-0.0090.1367No
73Tnfaip36149-0.0130.1314No
74Myc6389-0.0310.1117No
75Sphk16442-0.0350.1083No
76Eif16466-0.0360.1075No
77Tnip16515-0.0400.1047No
78Icam16741-0.0580.0871No
79Dram17050-0.0800.0629No
80Ripk27170-0.0900.0556No
81Sqstm17254-0.0960.0516No
82Zc3h12a7265-0.0970.0540No
83Btg17428-0.1080.0435No
84Nampt7520-0.1160.0395No
85Ccnl17547-0.1190.0412No
86Ifih17593-0.1220.0414No
87Nfkbia7696-0.1290.0368No
88Nfe2l27735-0.1330.0380No
89Fut47817-0.1400.0356No
90Bcl67819-0.1400.0402No
91Slc2a37838-0.1410.0434No
92Pnrc17975-0.1510.0366No
93Klf98042-0.1550.0361No
94Yrdc8070-0.1580.0390No
95Plaur8180-0.1670.0351No
96Ppp1r15a8271-0.1740.0331No
97Il15ra8351-0.1810.0323No
98Tnfaip28360-0.1820.0377No
99Tiparp8421-0.1890.0388No
100Csf18643-0.2080.0265No
101B4galt18742-0.2160.0252No
102Bcl38901-0.2280.0191No
103Klf68951-0.2310.0226No
104Ccrl29089-0.2390.0187No
105Gadd45b9232-0.2490.0147No
106Sat19397-0.2680.0094No
107Btg39530-0.2800.0073No
108Birc29592-0.2890.0116No
109Clcf19807-0.3110.0034No
110Pde4b9875-0.3180.0083No
111Nfkb110635-0.426-0.0435No
112Nr4a210762-0.443-0.0396No
113Abca110831-0.457-0.0302No
114Marcks11006-0.489-0.0290No
115Rigi11036-0.497-0.0149No
116Cdkn1a11114-0.522-0.0041No
117Nfkb211394-0.639-0.0070No
118Ifit211512-0.7640.0084No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_TNFA_SIGNALING_VIA_NFKB   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_TNFA_SIGNALING_VIA_NFKB: Random ES distribution   
Gene set null distribution of ES for HALLMARK_TNFA_SIGNALING_VIA_NFKB