Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Eosinophil.Eosinophil_Pheno.cls #Group3_versus_Group4.Eosinophil_Pheno.cls #Group3_versus_Group4_repos
Phenotype	Eosinophil_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	2
GeneSet	HALLMARK_HYPOXIA
Enrichment Score (ES)	0.29159915
Normalized Enrichment Score (NES)	1.283983
Nominal p-value	0.092402466
FDR q-value	0.209695
FWER p-Value	0.695

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Jmjd6	37	1.407	0.0352	Yes
2	Scarb1	137	1.101	0.0567	Yes
3	Tnfaip3	514	0.779	0.0452	Yes
4	Atp7a	552	0.763	0.0628	Yes
5	Zfp36	622	0.735	0.0769	Yes
6	Plaur	670	0.723	0.0926	Yes
7	Hk1	672	0.723	0.1122	Yes
8	Klf7	677	0.722	0.1316	Yes
9	Ids	683	0.720	0.1508	Yes
10	Phkg1	821	0.679	0.1575	Yes
11	Pgm1	857	0.672	0.1728	Yes
12	Anxa2	870	0.668	0.1900	Yes
13	Vhl	957	0.642	0.2000	Yes
14	Hexa	988	0.634	0.2147	Yes
15	Selenbp1	1102	0.603	0.2213	Yes
16	Pdk1	1221	0.581	0.2269	Yes
17	Rbpj	1349	0.551	0.2309	Yes
18	Prdx5	1400	0.542	0.2414	Yes
19	Eno3	1424	0.537	0.2541	Yes
20	Ccng2	1611	0.509	0.2518	Yes
21	Ndrg1	1628	0.505	0.2642	Yes
22	Lxn	1636	0.504	0.2773	Yes
23	Gcnt2	1732	0.488	0.2824	Yes
24	Ak4	1778	0.480	0.2916	Yes
25	Mif	1952	0.454	0.2889	No
26	Jun	2116	0.428	0.2864	No
27	Pgm2	2470	0.380	0.2661	No
28	Tpd52	2551	0.372	0.2693	No
29	Klhl24	2701	0.354	0.2660	No
30	Foxo3	2986	0.325	0.2501	No
31	Cavin1	3200	0.302	0.2398	No
32	Dusp1	3280	0.298	0.2411	No
33	Angptl4	3415	0.282	0.2372	No
34	Pdk3	3619	0.262	0.2267	No
35	Ero1a	3699	0.253	0.2267	No
36	Plac8	3719	0.251	0.2319	No
37	Bcl2	3839	0.238	0.2281	No
38	Pklr	3906	0.229	0.2286	No
39	P4ha1	3962	0.223	0.2299	No
40	Cdkn1a	4009	0.220	0.2319	No
41	Casp6	4055	0.216	0.2338	No
42	Gpc3	4111	0.208	0.2347	No
43	Irs2	4170	0.202	0.2352	No
44	Gpc4	4172	0.202	0.2407	No
45	Plin2	4277	0.192	0.2368	No
46	Ndst2	4509	0.173	0.2215	No
47	Tes	4651	0.159	0.2135	No
48	Pfkl	4835	0.143	0.2015	No
49	Hdlbp	4980	0.133	0.1926	No
50	Ndst1	4986	0.132	0.1958	No
51	Xpnpep1	4990	0.132	0.1991	No
52	Slc2a3	5009	0.130	0.2011	No
53	Slc6a6	5095	0.124	0.1971	No
54	Sdc2	5134	0.119	0.1971	No
55	B3galt6	5222	0.111	0.1925	No
56	Ets1	5427	0.094	0.1773	No
57	Ankzf1	5435	0.093	0.1793	No
58	Ppp1r15a	5467	0.089	0.1790	No
59	Tiparp	5629	0.074	0.1670	No
60	Gpi1	5636	0.073	0.1685	No
61	Myh9	5828	0.060	0.1535	No
62	Map3k1	5840	0.058	0.1541	No
63	Ilvbl	5863	0.056	0.1537	No
64	Vegfa	6069	0.038	0.1369	No
65	Tpst2	6142	0.033	0.1315	No
66	Prkca	6404	0.011	0.1091	No
67	Gaa	6478	0.006	0.1029	No
68	Hk2	6511	0.003	0.1002	No
69	Galk1	6622	-0.002	0.0907	No
70	Gpc1	6700	-0.009	0.0842	No
71	Zfp292	6900	-0.027	0.0676	No
72	Gbe1	7040	-0.038	0.0566	No
73	Cited2	7169	-0.049	0.0468	No
74	Klf6	7518	-0.077	0.0186	No
75	Pgk1	7622	-0.083	0.0119	No
76	Pam	7665	-0.088	0.0106	No
77	Nedd4l	7684	-0.089	0.0115	No
78	Rora	7685	-0.089	0.0139	No
79	Mxi1	7771	-0.096	0.0092	No
80	Ampd3	7819	-0.099	0.0078	No
81	Grhpr	7980	-0.112	-0.0031	No
82	Cdkn1b	8039	-0.118	-0.0049	No
83	Gys1	8189	-0.132	-0.0143	No
84	Cxcr4	8255	-0.137	-0.0162	No
85	Nagk	8271	-0.138	-0.0137	No
86	Fos	8302	-0.141	-0.0125	No
87	Vldlr	8598	-0.166	-0.0336	No
88	Ext1	8655	-0.170	-0.0339	No
89	Csrp2	8690	-0.174	-0.0321	No
90	Pim1	8719	-0.176	-0.0297	No
91	Pnrc1	8901	-0.191	-0.0402	No
92	Bnip3l	8963	-0.196	-0.0402	No
93	Hspa5	8975	-0.197	-0.0358	No
94	Noct	8991	-0.199	-0.0316	No
95	Ddit3	9122	-0.211	-0.0372	No
96	Pfkp	9183	-0.218	-0.0365	No
97	Ier3	9208	-0.220	-0.0325	No
98	Sap30	9387	-0.235	-0.0416	No
99	Car12	9448	-0.243	-0.0402	No
100	Ldhc	9587	-0.256	-0.0452	No
101	Tpi1	9697	-0.266	-0.0475	No
102	Tgfbi	9800	-0.275	-0.0488	No
103	Aldoa	9811	-0.276	-0.0421	No
104	Isg20	9829	-0.278	-0.0360	No
105	Slc37a4	9859	-0.282	-0.0309	No
106	Mt1	9935	-0.290	-0.0295	No
107	Siah2	10032	-0.298	-0.0297	No
108	Glrx	10036	-0.298	-0.0218	No
109	Nr3c1	10078	-0.302	-0.0171	No
110	Large1	10226	-0.318	-0.0213	No
111	Slc2a1	10595	-0.368	-0.0432	No
112	Btg1	10736	-0.388	-0.0448	No
113	Fam162a	10838	-0.405	-0.0425	No
114	Slc25a1	10841	-0.406	-0.0316	No
115	Ldha	10850	-0.408	-0.0212	No
116	Fosl2	10966	-0.433	-0.0194	No
117	Ugp2	11086	-0.459	-0.0172	No
118	Sult2b1	11249	-0.518	-0.0171	No
119	Kdm3a	11363	-0.569	-0.0114	No
120	Pfkfb3	11379	-0.576	0.0030	No
121	Wsb1	11451	-0.620	0.0138	No