DatasetEosinophil.Eosinophil_Pheno.cls
#Group1_versus_Group4.Eosinophil_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeEosinophil_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class0
GeneSetHALLMARK_DNA_REPAIR
Enrichment Score (ES)0.38453618
Normalized Enrichment Score (NES)1.6199456
Nominal p-value0.0075329565
FDR q-value0.08144251
FWER p-Value0.097
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_DNA_REPAIR   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Gtf2h351.4970.0371Yes
2Rfc3301.1340.0634Yes
3Sf3a31090.9450.0803Yes
4Clp12160.8140.0914Yes
5Bcap312790.7610.1051Yes
6Arl6ip13210.7340.1199Yes
7Polr2j3280.7270.1376Yes
8Zwint3830.7010.1504Yes
9Polr2d4120.6920.1653Yes
10Ssrp14480.6810.1793Yes
11Hcls15810.6340.1837Yes
12Polh7190.5990.1868Yes
13Sdcbp8230.5650.1920Yes
14Alyref8370.5610.2049Yes
15Polr2k8450.5600.2183Yes
16Polr2e8460.5590.2323Yes
17Pola29970.5290.2325Yes
18Nudt910200.5250.2437Yes
19Pola112090.4890.2396Yes
20Ercc112380.4840.2492Yes
21Nfx112770.4760.2579Yes
22Ercc414000.4560.2586Yes
23Ak314120.4550.2691Yes
24Sec61a114260.4530.2793Yes
25Gpx415730.4260.2772Yes
26Ada15910.4230.2863Yes
27Taf1c16440.4160.2922Yes
28Gtf2a216830.4110.2992Yes
29Pole417820.4000.3007Yes
30Tarbp217860.4000.3105Yes
31Gtf2h117990.3990.3194Yes
32Taf918300.3950.3267Yes
33Pold118420.3930.3356Yes
34Ddb118860.3870.3415Yes
35Cetn221170.3570.3304Yes
36Zfp70721460.3540.3368Yes
37Taf1222600.3410.3355Yes
38Srsf622730.3390.3429Yes
39Ercc524320.3230.3372Yes
40Snapc424690.3200.3421Yes
41Prim124720.3200.3500Yes
42Rpa225690.3130.3494Yes
43Guk126420.3030.3507Yes
44Taf1326510.3030.3576Yes
45Pde4b27080.2980.3602Yes
46Gtf2b27330.2940.3655Yes
47Polr1d27600.2900.3705Yes
48Umps27760.2880.3764Yes
49Fen128070.2870.3810Yes
50Rfc428480.2820.3845Yes
51Gtf2f132580.2430.3550No
52Pold434020.2270.3482No
53Nelfb36710.2040.3299No
54Aprt36790.2040.3344No
55Cox1737340.1980.3347No
56Nme141220.1600.3049No
57Polr1c41380.1580.3076No
58Polr2a41790.1550.3080No
59Supt542200.1510.3083No
60Adcy642890.1430.3059No
61Eloa43310.1380.3058No
62Npr244800.1340.2963No
63Gsdme45510.1270.2933No
64Lig145890.1240.2932No
65Mpg46080.1230.2947No
66Nt5c346220.1210.2966No
67Rfc246930.1150.2934No
68Impdh247360.1110.2925No
69Eif1b47490.1100.2942No
70Trp5347930.1080.2932No
71Polr2h49090.0960.2856No
72Adrm149320.0950.2860No
73Pold349600.0930.2860No
74Polr2c50280.0870.2824No
75Usp1150840.0810.2796No
76Dut51360.0780.2771No
77Ell51930.0730.2741No
78Ncbp252070.0720.2747No
79Snapc552520.0680.2726No
80Ago454550.0510.2563No
81Nudt2157750.0260.2291No
82Nelfe60350.0030.2066No
83Cstf36219-0.0030.1907No
84Polb6269-0.0080.1867No
85Cant16308-0.0110.1836No
86Smad56314-0.0110.1835No
87Pom1216363-0.0150.1797No
88Gtf3c56364-0.0150.1800No
89Pcna6374-0.0160.1796No
90Rnmt6398-0.0180.1781No
91Polr2f6804-0.0450.1439No
92Rfc56851-0.0490.1411No
93Dguok6890-0.0530.1391No
94Tk26934-0.0560.1368No
95Polr2i7052-0.0650.1282No
96Gtf2h57149-0.0720.1216No
97Nelfcd7187-0.0760.1203No
98Xpc7206-0.0770.1207No
99Rae17309-0.0840.1139No
100Ddb27344-0.0870.1131No
101Upf3b7388-0.0900.1116No
102Aaas7416-0.0930.1116No
103Gmpr27443-0.0960.1117No
104Cmpk27478-0.0990.1113No
105Tyms7498-0.1010.1121No
106Rad517509-0.1010.1138No
107Polr2g7547-0.1040.1132No
108Ercc87561-0.1060.1147No
109Dctn47643-0.1120.1104No
110Supt4a7883-0.1320.0929No
111Tsg1018066-0.1450.0807No
112Dgcr88212-0.1530.0719No
113Surf18308-0.1610.0676No
114Ercc38811-0.2070.0290No
115Rad529087-0.2280.0108No
116Mrpl409114-0.2310.0143No
117Polr3gl9192-0.2380.0135No
118Polr1h9261-0.2450.0137No
119Poll9264-0.2450.0197No
120Brf29277-0.2460.0248No
121Rpa39337-0.2530.0260No
122Nt5c9528-0.2720.0163No
123Pnp9588-0.2780.0181No
124Sac3d19618-0.2820.0226No
125Mpc29619-0.2820.0297No
126Rbx19623-0.2820.0365No
127Taf69903-0.3120.0200No
128Edf19948-0.3170.0241No
129Stx310007-0.3250.0272No
130Rrm2b10040-0.3290.0326No
131Vps37b10095-0.3330.0363No
132Itpa10213-0.3470.0348No
133Nme410258-0.3540.0398No
134Dad110328-0.3640.0429No
135Polr3c10352-0.3670.0501No
136Vps2810632-0.4060.0360No
137Ercc210634-0.4060.0461No
138Rev3l10887-0.4590.0356No
139Taf1011104-0.5090.0295No
140Rala11296-0.5770.0273No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_DNA_REPAIR   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_DNA_REPAIR: Random ES distribution   
Gene set null distribution of ES for HALLMARK_DNA_REPAIR