DatasetEosinophil.Eosinophil_Pheno.cls
#Group1_versus_Group3.Eosinophil_Pheno.cls
#Group1_versus_Group3_repos
PhenotypeEosinophil_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class2
GeneSetHALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)-0.24009469
Normalized Enrichment Score (NES)-1.0651323
Nominal p-value0.30769232
FDR q-value0.7088886
FWER p-Value0.98
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_TNFA_SIGNALING_VIA_NFKB   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Pnrc141.1940.0341No
2Ifit21440.6780.0415No
3Cebpd1630.6620.0590No
4Klf102130.6250.0728No
5Pfkfb32720.5880.0847No
6Nfe2l23080.5700.0981No
7Ier33630.5500.1092No
8Tnfaip85020.4990.1116No
9Tnfaip36000.4760.1169No
10Rcan16590.4630.1252No
11Zbtb107830.4350.1271No
12Cd448090.4290.1373No
13Yrdc8590.4190.1451No
14Fosl28720.4170.1560No
15Tnfaip210390.3850.1527No
16Bcl310460.3840.1633No
17Plek11470.3690.1652No
18Tank14660.3210.1468No
19Sqstm114820.3200.1547No
20Gch116250.3010.1510No
21Il15ra16600.2960.1566No
22Mcl119360.2670.1404No
23Ppp1r15a19760.2630.1446No
24Btg120300.2580.1474No
25Rigi22410.2380.1360No
26Nr4a224730.2190.1222No
27Trib127190.1960.1065No
28Litaf27380.1950.1106No
29Smad327470.1940.1155No
30Rel27910.1900.1172No
31Atp2b128430.1840.1181No
32Rela29970.1710.1097No
33Cdkn1a30350.1670.1113No
34Nfkb130380.1670.1159No
35Birc230460.1670.1201No
36Nampt30720.1650.1227No
37Zc3h12a33140.1440.1059No
38Tgif133920.1390.1032No
39B4galt134510.1330.1020No
40Dnajb435430.1260.0977No
41Sphk138700.1000.0722No
42Olr141010.0830.0546No
43Ehd142070.0750.0476No
44Btg342890.0680.0425No
45Stat5a44790.0550.0276No
46Jun46080.0450.0178No
47Ninj147830.0340.0037No
48Map2k348560.028-0.0018No
49Lamb349590.019-0.0101No
50Pde4b50210.015-0.0150No
51Sat150800.012-0.0197No
52Rnf19b51370.007-0.0244No
53Zfp365375-0.009-0.0447No
54Kdm6b5545-0.023-0.0588No
55Dennd5a5561-0.023-0.0594No
56Cflar5572-0.025-0.0596No
57Eif15599-0.026-0.0611No
58Birc35690-0.032-0.0680No
59Pmepa15782-0.039-0.0748No
60B4galt55791-0.039-0.0744No
61Ptger46021-0.056-0.0927No
62Nfkbie6133-0.063-0.1005No
63Rhob6259-0.073-0.1093No
64Gadd45b6295-0.076-0.1102No
65Cd696314-0.077-0.1095No
66Slc16a66345-0.080-0.1098No
67Ier26914-0.122-0.1557No
68Fosb7191-0.144-0.1756No
69Irf17246-0.148-0.1760No
70Ifih17323-0.153-0.1782No
71Vegfa7362-0.156-0.1770No
72Dram17393-0.158-0.1751No
73Map3k87442-0.161-0.1746No
74Irs27476-0.164-0.1727No
75Ripk27639-0.179-0.1817No
76Dusp17775-0.191-0.1879No
77Klf67966-0.208-0.1985No
78Nfkbia8065-0.215-0.2008No
79Trip108153-0.221-0.2020No
80Marcks8406-0.242-0.2169No
81Tiparp8432-0.244-0.2121No
82Mxd18464-0.248-0.2076No
83Ccnl18519-0.253-0.2050No
84Slc2a38615-0.261-0.2057No
85Nfat58733-0.272-0.2081No
86Fos8737-0.272-0.2005No
87Nfkb29193-0.319-0.2309Yes
88Csf19197-0.320-0.2219Yes
89Ier59225-0.323-0.2149Yes
90Tap19234-0.324-0.2063Yes
91Panx19241-0.325-0.1974Yes
92Tnip19305-0.332-0.1933Yes
93Junb9446-0.347-0.1955Yes
94Gpr1839575-0.362-0.1962Yes
95Icam19628-0.367-0.1901Yes
96Fut49671-0.373-0.1831Yes
97Ptpre9693-0.375-0.1741Yes
98Tnip29708-0.376-0.1645Yes
99Ccrl29789-0.387-0.1603Yes
100Dusp29930-0.408-0.1607Yes
101Btg210150-0.441-0.1670Yes
102Ldlr10168-0.443-0.1557Yes
103Cebpb10190-0.447-0.1447Yes
104Sgk110340-0.467-0.1442Yes
105Gadd45a10354-0.469-0.1318Yes
106Clcf110417-0.479-0.1234Yes
107Myc10442-0.482-0.1116Yes
108Per110444-0.483-0.0977Yes
109Tsc22d110458-0.486-0.0848Yes
110Klf910732-0.541-0.0930Yes
111Plaur10911-0.580-0.0918Yes
112Abca111001-0.606-0.0820Yes
113Bcl611076-0.631-0.0703Yes
114Il6st11110-0.641-0.0547Yes
115Pdlim511277-0.718-0.0484Yes
116Ets211337-0.748-0.0320Yes
117Sod211509-0.912-0.0206Yes
118Ifngr211552-1.0120.0050Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_TNFA_SIGNALING_VIA_NFKB   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_TNFA_SIGNALING_VIA_NFKB: Random ES distribution   
Gene set null distribution of ES for HALLMARK_TNFA_SIGNALING_VIA_NFKB