Details for gene set HALLMARK_TNFA_SIGNALING_VIA

Table: GSEA Results Summary

Dataset	CMP.CMP_Pheno.cls#Group6_versus_Group8.CMP_Pheno.cls#Group6_versus_Group8_repos
Phenotype	CMP_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	4
GeneSet	HALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)	0.20769803
Normalized Enrichment Score (NES)	0.7928161
Nominal p-value	0.82376236
FDR q-value	0.9881677
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Fjx1	24	1.042	0.0263	Yes
2	Cd80	81	0.829	0.0453	Yes
3	Klf4	215	0.699	0.0570	Yes
4	Egr1	217	0.698	0.0753	Yes
5	Ccnd1	226	0.689	0.0931	Yes
6	Tnc	431	0.584	0.0981	Yes
7	Zc3h12a	495	0.575	0.1100	Yes
8	Dusp1	548	0.565	0.1223	Yes
9	Kynu	614	0.556	0.1336	Yes
10	Tubb2a	771	0.506	0.1390	Yes
11	Fos	894	0.478	0.1454	Yes
12	Gem	942	0.467	0.1553	Yes
13	Btg3	1400	0.416	0.1429	Yes
14	Klf6	1566	0.406	0.1452	Yes
15	Plk2	1588	0.404	0.1548	Yes
16	Map3k8	1694	0.395	0.1599	Yes
17	Rcan1	1762	0.387	0.1667	Yes
18	Relb	1805	0.381	0.1746	Yes
19	Cd69	1911	0.367	0.1789	Yes
20	Fosb	2005	0.354	0.1835	Yes
21	Bcl6	2031	0.350	0.1915	Yes
22	Tlr2	2049	0.348	0.1998	Yes
23	Rela	2164	0.337	0.2028	Yes
24	Zfp36	2240	0.329	0.2077	Yes
25	Mcl1	2832	0.281	0.1850	No
26	Ppp1r15a	2882	0.278	0.1898	No
27	Clcf1	2913	0.275	0.1955	No
28	Pfkfb3	3569	0.248	0.1686	No
29	Vegfa	3713	0.239	0.1677	No
30	Per1	3714	0.239	0.1740	No
31	Ptgs2	3732	0.239	0.1794	No
32	Il6st	3753	0.237	0.1846	No
33	Phlda2	4036	0.225	0.1762	No
34	Hes1	4038	0.225	0.1821	No
35	Jun	4260	0.217	0.1765	No
36	Sqstm1	4298	0.215	0.1803	No
37	Gadd45a	4334	0.213	0.1841	No
38	Dram1	4442	0.206	0.1841	No
39	Panx1	4510	0.202	0.1860	No
40	Atf3	4611	0.196	0.1861	No
41	Trib1	4644	0.195	0.1896	No
42	Pmepa1	4760	0.190	0.1887	No
43	Slc2a3	4967	0.180	0.1830	No
44	Junb	4982	0.179	0.1870	No
45	Fosl1	5374	0.159	0.1712	No
46	Cd44	5593	0.151	0.1641	No
47	F2rl1	5611	0.151	0.1672	No
48	Serpinb8	5833	0.141	0.1596	No
49	Nr4a1	5860	0.140	0.1620	No
50	Ninj1	5906	0.138	0.1633	No
51	B4galt5	5920	0.137	0.1663	No
52	Abca1	6017	0.133	0.1649	No
53	Snn	6158	0.127	0.1611	No
54	Il7r	6167	0.127	0.1640	No
55	Atp2b1	6627	0.109	0.1435	No
56	Dusp4	6670	0.108	0.1442	No
57	Dusp5	6722	0.106	0.1444	No
58	Plek	6957	0.097	0.1350	No
59	Eif1	6984	0.096	0.1362	No
60	Olr1	7018	0.095	0.1370	No
61	Gpr183	7092	0.092	0.1357	No
62	Tnf	7315	0.084	0.1266	No
63	Lamb3	7363	0.082	0.1264	No
64	Stat5a	7419	0.080	0.1257	No
65	Ptpre	7487	0.078	0.1243	No
66	Zbtb10	7504	0.077	0.1255	No
67	Tnfaip8	7590	0.074	0.1231	No
68	Birc2	7675	0.072	0.1207	No
69	Plaur	7709	0.071	0.1209	No
70	Hbegf	8097	0.059	0.1027	No
71	Id2	8142	0.057	0.1020	No
72	Cebpb	8144	0.057	0.1035	No
73	Ldlr	8303	0.052	0.0968	No
74	Nfil3	8496	0.046	0.0882	No
75	Nfat5	8503	0.046	0.0891	No
76	Gch1	8628	0.042	0.0839	No
77	Phlda1	8668	0.041	0.0830	No
78	Kdm6b	8898	0.033	0.0722	No
79	Rigi	9097	0.027	0.0628	No
80	Dnajb4	9121	0.026	0.0623	No
81	Btg2	9180	0.024	0.0599	No
82	Bhlhe40	9341	0.018	0.0523	No
83	Smad3	9555	0.012	0.0417	No
84	Dennd5a	9561	0.011	0.0417	No
85	Fosl2	9641	0.009	0.0379	No
86	Map2k3	9766	0.004	0.0317	No
87	Cdkn1a	9815	0.003	0.0293	No
88	Socs3	9833	0.002	0.0285	No
89	Ptger4	10419	-0.006	-0.0011	No
90	Sphk1	10504	-0.009	-0.0052	No
91	F3	10714	-0.016	-0.0154	No
92	B4galt1	10770	-0.018	-0.0178	No
93	Bcl3	10849	-0.021	-0.0212	No
94	Slc16a6	10850	-0.021	-0.0207	No
95	Csf1	10955	-0.024	-0.0253	No
96	Tsc22d1	10973	-0.025	-0.0255	No
97	Ifih1	10987	-0.025	-0.0255	No
98	Pde4b	11044	-0.027	-0.0277	No
99	Tnfsf9	11107	-0.029	-0.0301	No
100	Sod2	11165	-0.031	-0.0322	No
101	Ehd1	11238	-0.034	-0.0349	No
102	Il6	11312	-0.036	-0.0377	No
103	Birc3	11443	-0.040	-0.0433	No
104	Cflar	11901	-0.054	-0.0652	No
105	Ccnl1	12163	-0.064	-0.0768	No
106	Nfkb1	12418	-0.073	-0.0878	No
107	Tgif1	12544	-0.078	-0.0922	No
108	Ets2	12586	-0.080	-0.0921	No
109	Lif	12588	-0.080	-0.0901	No
110	Rel	12632	-0.081	-0.0901	No
111	Egr2	12747	-0.085	-0.0937	No
112	Trip10	12916	-0.091	-0.0999	No
113	Mxd1	13260	-0.106	-0.1146	No
114	Pnrc1	13283	-0.107	-0.1129	No
115	Tnip1	13298	-0.108	-0.1108	No
116	Tnip2	13318	-0.108	-0.1089	No
117	Klf10	13434	-0.113	-0.1118	No
118	Ier2	13545	-0.117	-0.1143	No
119	Fut4	13648	-0.120	-0.1163	No
120	Sgk1	13683	-0.122	-0.1148	No
121	Il18	13709	-0.124	-0.1128	No
122	Rhob	13790	-0.127	-0.1136	No
123	Tnfrsf9	13805	-0.128	-0.1109	No
124	Rnf19b	13870	-0.131	-0.1107	No
125	Plpp3	13986	-0.135	-0.1130	No
126	Traf1	14221	-0.145	-0.1211	No
127	Spsb1	14331	-0.151	-0.1227	No
128	Klf9	14549	-0.159	-0.1296	No
129	Marcks	14620	-0.162	-0.1289	No
130	Yrdc	14652	-0.164	-0.1261	No
131	Gadd45b	14702	-0.166	-0.1242	No
132	Serpinb2	14719	-0.167	-0.1206	No
133	Klf2	14789	-0.171	-0.1197	No
134	Slc2a6	15297	-0.194	-0.1404	No
135	Tank	15399	-0.199	-0.1403	No
136	Ripk2	15423	-0.200	-0.1362	No
137	Cxcl10	15445	-0.201	-0.1320	No
138	Tiparp	15490	-0.203	-0.1289	No
139	Btg1	15590	-0.208	-0.1284	No
140	Nfkbie	15612	-0.209	-0.1240	No
141	Ier5	15869	-0.221	-0.1312	No
142	Jag1	16032	-0.230	-0.1334	No
143	Ifit2	16048	-0.231	-0.1281	No
144	Dusp2	16113	-0.234	-0.1252	No
145	Nr4a2	16454	-0.250	-0.1360	No
146	Nampt	16786	-0.270	-0.1457	No
147	Irs2	16838	-0.273	-0.1411	No
148	Nfkbia	16860	-0.275	-0.1349	No
149	Gfpt2	17301	-0.299	-0.1495	No
150	Il15ra	17320	-0.301	-0.1425	No
151	Inhba	17474	-0.314	-0.1420	No
152	Pdlim5	17552	-0.319	-0.1375	No
153	Il1b	17603	-0.324	-0.1315	No
154	Ifngr2	17731	-0.330	-0.1293	No
155	Nfe2l2	17929	-0.348	-0.1302	No
156	Nfkb2	18189	-0.373	-0.1336	No
157	Ier3	18237	-0.379	-0.1260	No
158	Plau	18306	-0.386	-0.1193	No
159	Tnfaip3	18413	-0.401	-0.1141	No
160	Tnfaip6	18489	-0.411	-0.1071	No
161	Ccrl2	18574	-0.423	-0.1002	No
162	Litaf	18618	-0.430	-0.0911	No
163	Tap1	18651	-0.434	-0.0812	No
164	G0s2	18714	-0.443	-0.0727	No
165	Myc	18782	-0.448	-0.0643	No
166	Ccl5	18891	-0.465	-0.0576	No
167	Icam1	19020	-0.487	-0.0512	No
168	Maff	19156	-0.513	-0.0446	No
169	Icosl	19162	-0.514	-0.0313	No
170	Tnfaip2	19277	-0.542	-0.0228	No
171	Irf1	19361	-0.565	-0.0122	No
172	Cebpd	19488	-0.620	-0.0022	No
173	Sat1	19518	-0.630	0.0129	No