DatasetCMP.CMP_Pheno.cls#Group6_versus_Group8.CMP_Pheno.cls#Group6_versus_Group8_repos
PhenotypeCMP_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class4
GeneSetHALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)0.30690312
Normalized Enrichment Score (NES)1.3407377
Nominal p-value0.16317992
FDR q-value0.22576806
FWER p-Value0.657
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_G2M_CHECKPOINT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Ccnd12260.6890.0096Yes
2Nek23980.5910.0190Yes
3Kif235640.5620.0278Yes
4Tnpo27240.5240.0358Yes
5Pttg17610.5100.0496Yes
6Ube2s7880.5040.0637Yes
7Aurka8260.4950.0770Yes
8Kif2c8340.4930.0918Yes
9Cenpf8850.4800.1039Yes
10Abl110980.4430.1067Yes
11Sqle15930.4040.0938Yes
12Slc7a516730.3990.1020Yes
13Cdkn318040.3810.1071Yes
14Mki6719210.3650.1124Yes
15Stil20660.3470.1156Yes
16Cenpa21710.3360.1206Yes
17Ccna221720.3360.1309Yes
18Odc123180.3210.1334Yes
19Kif1124940.3040.1338Yes
20Tfdp125010.3040.1428Yes
21Ccnt125150.3030.1514Yes
22Cdkn2c25660.2990.1580Yes
23Fancc25770.2980.1667Yes
24Upf127730.2850.1654Yes
25Cdc727950.2830.1731Yes
26Bard128010.2830.1815Yes
27Knl128060.2820.1899Yes
28Odf228240.2820.1977Yes
29Rasal228790.2780.2035Yes
30Bub329010.2770.2109Yes
31Troap30180.2690.2132Yes
32Cdc25b31600.2630.2140Yes
33Cenpe32870.2580.2155Yes
34Tacc335010.2520.2124Yes
35Hus136870.2410.2103Yes
36Kif438030.2340.2116Yes
37Polq38840.2330.2147Yes
38Bub139640.2280.2176Yes
39E2f341610.2220.2145Yes
40Wrn42330.2180.2175Yes
41Kmt5a42770.2160.2219Yes
42Plk442900.2150.2279Yes
43Notch243300.2130.2325Yes
44Hmmr43460.2120.2382Yes
45Cks245680.1980.2330Yes
46Numa145750.1980.2388Yes
47Nup5047970.1880.2333Yes
48Xpo148290.1870.2374Yes
49Lig349080.1830.2390Yes
50Chaf1a49800.1790.2409Yes
51Orc550790.1740.2412Yes
52Mnat151110.1730.2449Yes
53Aurkb51150.1730.2501Yes
54Top2a51680.1700.2526Yes
55Cul4a52150.1670.2554Yes
56Rad2152490.1660.2588Yes
57Cdk152690.1650.2629Yes
58Ube2c52760.1650.2676Yes
59Ndc8053400.1610.2693Yes
60Pole55060.1540.2656Yes
61Incenp55200.1530.2697Yes
62Kpnb155240.1530.2742Yes
63Ccnf56340.1500.2732Yes
64Lmnb156610.1480.2765Yes
65Cul557420.1440.2768Yes
66Rps6ka557460.1440.2811Yes
67Ttk58340.1410.2809Yes
68Kif2258470.1400.2846Yes
69Rad23b58610.1400.2882Yes
70Cdkn1b58940.1380.2908Yes
71Pml59210.1370.2937Yes
72Prc159980.1340.2939Yes
73Katna160240.1330.2967Yes
74Pola261300.1280.2953Yes
75Tra2b61340.1280.2991Yes
76Nasp61590.1270.3017Yes
77Ezh261810.1260.3045Yes
78Brca262100.1250.3069Yes
79Espl164040.1170.3006No
80Nsd264650.1150.3011No
81Smarcc165210.1130.3018No
82Ilf365630.1120.3031No
83Lbr67500.1050.2968No
84Traip69080.0990.2918No
85Cdc2769210.0980.2942No
86Stag170400.0940.2911No
87H2az270550.0930.2932No
88Tpx270600.0930.2959No
89Stmn172560.0860.2885No
90Smc273700.0820.2853No
91Prim274010.0810.2862No
92Nup9874750.0780.2849No
93Kif1576410.0730.2787No
94Nusap176880.0710.2785No
95G3bp178610.0670.2718No
96Mcm680450.0600.2643No
97Cdc681720.0560.2596No
98Mtf281890.0550.2605No
99Sfpq81910.0550.2621No
100Hira82350.0540.2615No
101Foxn382790.0520.2610No
102Tmpo85630.0440.2479No
103Birc585740.0440.2487No
104Gspt186700.0410.2451No
105Map3k2087480.0370.2423No
106Slc12a287960.0360.2410No
107Cul388480.0340.2395No
108Top189070.0330.2375No
109Smc489300.0320.2373No
110Rbl192020.0230.2242No
111Hnrnpu94340.0150.2129No
112Ythdc195280.0130.2085No
113Tgfb195340.0120.2086No
114Arid4a95480.0120.2083No
115Smad395550.0120.2084No
116Racgap197300.0060.1997No
117Mybl297760.0040.1975No
118Plk197810.0040.1974No
119Kif20b98760.0010.1926No
120Meis210240-0.0010.1741No
121Mad2l110249-0.0010.1738No
122Mapk1410345-0.0040.1690No
123Hmgb310396-0.0060.1667No
124H2ax10523-0.0100.1605No
125Syncrip10531-0.0100.1605No
126Ddx39a10567-0.0110.1590No
127Atrx10783-0.0180.1486No
128Bcl310849-0.0210.1459No
129Tent4a10881-0.0220.1450No
130E2f410976-0.0250.1410No
131Srsf211004-0.0260.1404No
132Tle311304-0.0360.1262No
133Kif5b11403-0.0390.1224No
134E2f111415-0.0390.1230No
135Snrpd111535-0.0420.1182No
136Dr111568-0.0430.1179No
137Ccnb211619-0.0440.1167No
138Srsf1011653-0.0450.1164No
139Ncl11681-0.0460.1164No
140Dmd11695-0.0460.1172No
141Cdk411737-0.0480.1166No
142Pds5b12090-0.0620.1005No
143Hif1a12165-0.0640.0987No
144Rad54l12166-0.0640.1006No
145Dkc112255-0.0680.0982No
146Hspa812348-0.0710.0957No
147Cul112363-0.0720.0972No
148Mcm312368-0.0720.0992No
149Egf12449-0.0740.0974No
150Prpf4b12710-0.0840.0867No
151H2az112872-0.0890.0812No
152Smc1a13005-0.0950.0774No
153Fbxo513051-0.0970.0780No
154Ctcf13087-0.0990.0793No
155Dbf413145-0.1010.0795No
156E2f213274-0.1070.0762No
157Meis113353-0.1100.0756No
158Casp8ap213449-0.1130.0742No
159Pbk13450-0.1130.0777No
160Uck213466-0.1140.0804No
161Mcm513546-0.1170.0799No
162Pafah1b113837-0.1290.0691No
163Ewsr114049-0.1380.0626No
164Mcm214092-0.1400.0647No
165Cdc2014176-0.1440.0649No
166Efna514314-0.1500.0625No
167Gins214420-0.1540.0618No
168Slc38a114567-0.1600.0593No
169Chek114569-0.1600.0641No
170Marcks14620-0.1620.0665No
171Cdc4514623-0.1620.0714No
172Exo114951-0.1790.0602No
173Atf514956-0.1790.0655No
174Sap3015053-0.1840.0662No
175Cbx115085-0.1850.0703No
176Chmp1a15214-0.1900.0696No
177Ss1815299-0.1940.0712No
178Rpa215651-0.2110.0598No
179Hnrnpd15844-0.2200.0567No
180Cdc25a15897-0.2220.0609No
181Slc7a116094-0.2330.0580No
182Srsf116122-0.2350.0638No
183Amd116203-0.2390.0671No
184Jpt116366-0.2450.0663No
185Suv39h116387-0.2460.0728No
186Dtymk16970-0.2820.0518No
187Pura17159-0.2900.0511No
188H2bc1217409-0.3070.0478No
189Nolc117424-0.3090.0565No
190Hmga1b17777-0.3330.0488No
191Orc618136-0.3670.0417No
192Prmt518514-0.4150.0352No
193Myc18782-0.4480.0353No
194Cks1b19063-0.4950.0362No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_G2M_CHECKPOINT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_G2M_CHECKPOINT: Random ES distribution   
Gene set null distribution of ES for HALLMARK_G2M_CHECKPOINT