Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	CMP.CMP_Pheno.cls#Group6_versus_Group8.CMP_Pheno.cls#Group6_versus_Group8_repos
Phenotype	CMP_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	5
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.325201
Normalized Enrichment Score (NES)	-1.4291968
Nominal p-value	0.014373717
FDR q-value	0.25092652
FWER p-Value	0.478

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Phex	189	0.728	0.0119	No
2	Sh2b3	395	0.593	0.0189	No
3	Kynu	614	0.556	0.0242	No
4	Cdk5r1	1304	0.423	0.0016	No
5	C1qc	1309	0.423	0.0138	No
6	Irf7	1786	0.383	0.0009	No
7	Dyrk2	1821	0.379	0.0103	No
8	Sirt6	1978	0.357	0.0129	No
9	Tfpi2	2097	0.343	0.0170	No
10	Cpm	2493	0.304	0.0059	No
11	Pik3ca	2583	0.297	0.0101	No
12	Gnb4	2916	0.275	0.0013	No
13	Zfpm2	2996	0.270	0.0052	No
14	Rasgrp1	3038	0.268	0.0110	No
15	Fyn	3234	0.262	0.0088	No
16	Vcpip1	3265	0.260	0.0150	No
17	Fn1	3355	0.254	0.0179	No
18	F8	3739	0.238	0.0054	No
19	Fcnb	3818	0.234	0.0083	No
20	Ctss	3891	0.233	0.0115	No
21	Lcp2	3967	0.228	0.0145	No
22	Scg3	4045	0.225	0.0172	No
23	Src	4143	0.223	0.0188	No
24	Mmp15	4469	0.205	0.0083	No
25	Clu	4601	0.197	0.0074	No
26	Irf2	4863	0.185	-0.0005	No
27	Lamp2	5003	0.178	-0.0023	No
28	Pclo	5186	0.169	-0.0066	No
29	Dgkg	5196	0.168	-0.0021	No
30	Kcnip3	5254	0.166	-0.0001	No
31	Rbsn	5285	0.164	0.0032	No
32	Plscr1	5789	0.142	-0.0182	No
33	Ppp4c	5801	0.142	-0.0146	No
34	Usp8	5915	0.137	-0.0163	No
35	Casp4	6283	0.122	-0.0314	No
36	Usp14	6501	0.114	-0.0391	No
37	Plg	6595	0.111	-0.0406	No
38	Usp15	6672	0.107	-0.0413	No
39	Dusp5	6722	0.106	-0.0407	No
40	Pik3cg	6883	0.099	-0.0459	No
41	Plek	6957	0.097	-0.0468	No
42	C9	6994	0.095	-0.0458	No
43	Olr1	7018	0.095	-0.0442	No
44	Lyn	7160	0.090	-0.0487	No
45	Kif2a	7289	0.085	-0.0528	No
46	Grb2	7375	0.082	-0.0547	No
47	Rabif	7608	0.074	-0.0643	No
48	Plaur	7709	0.071	-0.0673	No
49	Pfn1	7710	0.071	-0.0653	No
50	Ctso	7718	0.070	-0.0635	No
51	Cd36	7748	0.070	-0.0630	No
52	Zeb1	7791	0.069	-0.0631	No
53	Gngt2	7804	0.068	-0.0617	No
54	Ctsc	7956	0.063	-0.0675	No
55	Atox1	8014	0.061	-0.0686	No
56	Cebpb	8144	0.057	-0.0735	No
57	Dock10	8330	0.051	-0.0814	No
58	Dusp6	8430	0.048	-0.0850	No
59	Spock2	8544	0.045	-0.0895	No
60	Gpd2	8906	0.033	-0.1069	No
61	Lgals3	8934	0.032	-0.1074	No
62	Actn2	9108	0.026	-0.1154	No
63	Gng2	9321	0.018	-0.1257	No
64	Csrp1	9469	0.014	-0.1328	No
65	Dgkh	9741	0.005	-0.1464	No
66	C1qa	9754	0.005	-0.1469	No
67	Adam9	9755	0.005	-0.1468	No
68	Prdm4	9814	0.003	-0.1496	No
69	Prkcd	9877	0.001	-0.1528	No
70	Ang	9978	0.000	-0.1579	No
71	Fdx1	10296	-0.003	-0.1740	No
72	Pim1	10313	-0.003	-0.1747	No
73	Hspa1a	10322	-0.004	-0.1750	No
74	Casp1	10436	-0.007	-0.1805	No
75	Pla2g4a	10512	-0.009	-0.1841	No
76	Raf1	10587	-0.012	-0.1875	No
77	F3	10714	-0.016	-0.1935	No
78	Mmp14	10754	-0.017	-0.1950	No
79	Gnai3	10840	-0.020	-0.1987	No
80	Dock9	11015	-0.026	-0.2068	No
81	Lta4h	11039	-0.027	-0.2072	No
82	Ehd1	11238	-0.034	-0.2163	No
83	Il6	11312	-0.036	-0.2189	No
84	Prep	11366	-0.037	-0.2205	No
85	Prcp	11469	-0.040	-0.2245	No
86	Notch4	11488	-0.041	-0.2242	No
87	Akap10	11599	-0.044	-0.2286	No
88	Col4a2	11806	-0.051	-0.2376	No
89	Casp7	11998	-0.059	-0.2456	No
90	Kcnip2	12017	-0.059	-0.2448	No
91	Cblb	12088	-0.062	-0.2465	No
92	Lap3	12280	-0.069	-0.2542	No
93	Casp9	12290	-0.069	-0.2526	No
94	Fcer1g	12414	-0.073	-0.2567	No
95	Cpq	12476	-0.075	-0.2576	No
96	Brpf3	12535	-0.078	-0.2583	No
97	Gp9	12697	-0.084	-0.2640	No
98	F7	13161	-0.102	-0.2846	No
99	Jak2	13483	-0.115	-0.2976	No
100	Gp1ba	13509	-0.116	-0.2955	No
101	Gca	13554	-0.117	-0.2943	No
102	Gnai2	13599	-0.119	-0.2930	No
103	Cd46	13674	-0.122	-0.2932	No
104	Hnf4a	13834	-0.129	-0.2975	No
105	Lipa	13861	-0.130	-0.2949	No
106	Usp16	13883	-0.131	-0.2921	No
107	Dock4	14082	-0.140	-0.2981	No
108	Xpnpep1	14465	-0.156	-0.3130	No
109	F10	14480	-0.156	-0.3091	No
110	Serpinb2	14719	-0.167	-0.3163	No
111	Cfb	14801	-0.171	-0.3154	No
112	Psmb9	14867	-0.174	-0.3135	No
113	Car2	14937	-0.178	-0.3118	No
114	Msrb1	14955	-0.179	-0.3074	No
115	Ctsh	15265	-0.192	-0.3175	No
116	Dpp4	15417	-0.199	-0.3193	Yes
117	Casp3	15433	-0.200	-0.3142	Yes
118	Calm3	15470	-0.202	-0.3100	Yes
119	Rce1	15473	-0.202	-0.3042	Yes
120	Ctsd	15584	-0.208	-0.3037	Yes
121	Lgmn	15692	-0.212	-0.3028	Yes
122	Ppp2cb	15698	-0.213	-0.2968	Yes
123	Prss36	15777	-0.217	-0.2944	Yes
124	Pdgfb	15802	-0.218	-0.2892	Yes
125	Stx4a	15891	-0.222	-0.2871	Yes
126	Lrp1	16021	-0.230	-0.2869	Yes
127	Ctsl	16237	-0.242	-0.2908	Yes
128	Cdh13	16424	-0.248	-0.2929	Yes
129	Cp	16462	-0.250	-0.2874	Yes
130	Anxa5	16690	-0.263	-0.2912	Yes
131	Hspa5	16790	-0.270	-0.2883	Yes
132	Rhog	16800	-0.271	-0.2807	Yes
133	Cr2	16925	-0.279	-0.2788	Yes
134	Psen1	16942	-0.280	-0.2714	Yes
135	Mmp8	16985	-0.283	-0.2652	Yes
136	Apoc1	17069	-0.285	-0.2610	Yes
137	L3mbtl4	17403	-0.307	-0.2689	Yes
138	Pcsk9	17633	-0.326	-0.2710	Yes
139	Gzmk	17653	-0.328	-0.2622	Yes
140	Rnf4	17779	-0.333	-0.2588	Yes
141	Lck	17804	-0.336	-0.2501	Yes
142	Ltf	18039	-0.357	-0.2515	Yes
143	Itgam	18087	-0.362	-0.2432	Yes
144	C2	18294	-0.385	-0.2423	Yes
145	Ctsb	18359	-0.394	-0.2340	Yes
146	Tnfaip3	18413	-0.401	-0.2248	Yes
147	Serpinc1	18456	-0.406	-0.2150	Yes
148	S100a9	18486	-0.411	-0.2043	Yes
149	Klkb1	18565	-0.422	-0.1958	Yes
150	Gnb2	18593	-0.426	-0.1846	Yes
151	Pik3r5	18622	-0.430	-0.1733	Yes
152	Calm1	18818	-0.453	-0.1699	Yes
153	Ccl5	18891	-0.465	-0.1598	Yes
154	Gmfb	18922	-0.471	-0.1475	Yes
155	C3	19078	-0.497	-0.1407	Yes
156	Maff	19156	-0.513	-0.1295	Yes
157	Was	19188	-0.520	-0.1157	Yes
158	Irf1	19361	-0.565	-0.1078	Yes
159	Me1	19430	-0.589	-0.0939	Yes
160	S100a13	19571	-0.659	-0.0816	Yes
161	Gata3	19582	-0.665	-0.0624	Yes
162	Pdp1	19589	-0.674	-0.0429	Yes
163	F5	19717	-0.827	-0.0249	Yes
164	Timp2	19751	-0.936	0.0010	Yes