Details for gene set HALLMARK_APICAL

Table: GSEA Results Summary

Dataset	CMP.CMP_Pheno.cls#Group6_versus_Group8.CMP_Pheno.cls#Group6_versus_Group8_repos
Phenotype	CMP_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	4
GeneSet	HALLMARK_APICAL_JUNCTION
Enrichment Score (ES)	0.1893847
Normalized Enrichment Score (NES)	0.80121773
Nominal p-value	0.85388994
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Cdh4	6	1.197	0.0346	Yes
2	Col16a1	41	0.946	0.0604	Yes
3	Nrtn	49	0.918	0.0869	Yes
4	Cdk8	386	0.596	0.0871	Yes
5	Cd86	397	0.592	0.1039	Yes
6	Col17a1	435	0.583	0.1190	Yes
7	Cx3cl1	447	0.583	0.1354	Yes
8	Nectin2	734	0.520	0.1360	Yes
9	Pbx2	940	0.467	0.1391	Yes
10	Speg	1144	0.439	0.1416	Yes
11	Negr1	1382	0.418	0.1417	Yes
12	Mmp9	1500	0.409	0.1476	Yes
13	Hadh	1701	0.394	0.1489	Yes
14	Msn	1729	0.390	0.1589	Yes
15	Cadm3	1860	0.373	0.1632	Yes
16	Itga10	2012	0.352	0.1657	Yes
17	Actg1	2019	0.352	0.1757	Yes
18	Adam15	2278	0.325	0.1720	Yes
19	Amigo1	2481	0.306	0.1706	Yes
20	Vcl	2641	0.296	0.1711	Yes
21	Rras	2929	0.274	0.1645	Yes
22	Slit2	2947	0.273	0.1716	Yes
23	Vcan	3020	0.269	0.1757	Yes
24	Tmem8b	3286	0.258	0.1697	Yes
25	Adamts5	3368	0.253	0.1730	Yes
26	Myh9	3653	0.244	0.1656	Yes
27	Cldn15	3673	0.242	0.1717	Yes
28	Taok2	3726	0.239	0.1760	Yes
29	Cdh8	4047	0.225	0.1662	Yes
30	Src	4143	0.223	0.1679	Yes
31	Kcnh2	4219	0.219	0.1704	Yes
32	Cap1	4238	0.218	0.1759	Yes
33	Lima1	4380	0.210	0.1748	Yes
34	Pals1	4398	0.208	0.1800	Yes
35	Icam5	4450	0.205	0.1834	Yes
36	Plcg1	4451	0.205	0.1894	Yes
37	Myh10	4744	0.191	0.1801	No
38	Nf2	4748	0.191	0.1855	No
39	Tjp1	4807	0.188	0.1880	No
40	Itga3	4893	0.183	0.1890	No
41	Egfr	5238	0.166	0.1763	No
42	Epb41l2	5719	0.146	0.1561	No
43	Akt3	6070	0.130	0.1420	No
44	Ctnna1	6109	0.129	0.1438	No
45	Amigo2	6296	0.121	0.1379	No
46	Actn1	6396	0.117	0.1363	No
47	Tsc1	6422	0.117	0.1384	No
48	Ptk2	6435	0.116	0.1412	No
49	Exoc4	6535	0.113	0.1394	No
50	Sirpa	6599	0.110	0.1394	No
51	Ikbkg	6820	0.102	0.1312	No
52	Nectin1	6877	0.100	0.1312	No
53	Crb3	6996	0.095	0.1280	No
54	Lama3	7215	0.087	0.1194	No
55	Lamb3	7363	0.082	0.1143	No
56	Dlg1	7449	0.079	0.1123	No
57	Cntn1	7464	0.079	0.1138	No
58	Rasa1	7584	0.075	0.1099	No
59	Sdc3	7653	0.073	0.1086	No
60	Pfn1	7710	0.071	0.1078	No
61	Nlgn2	7766	0.069	0.1070	No
62	Pten	7906	0.065	0.1018	No
63	Zyx	8039	0.060	0.0968	No
64	Mpzl1	8069	0.060	0.0971	No
65	Wnk4	8185	0.056	0.0929	No
66	Icam4	8271	0.053	0.0901	No
67	Cdh11	8391	0.050	0.0854	No
68	Mvd	8437	0.048	0.0845	No
69	Map3k20	8748	0.037	0.0698	No
70	Nectin3	8990	0.030	0.0584	No
71	Pard6g	9033	0.029	0.0571	No
72	Actn2	9108	0.026	0.0541	No
73	Baiap2	9125	0.026	0.0540	No
74	Mmp2	9193	0.023	0.0513	No
75	Pkd1	9221	0.022	0.0505	No
76	Cercam	9281	0.020	0.0481	No
77	Pecam1	9283	0.020	0.0487	No
78	Mdk	9477	0.014	0.0392	No
79	Arhgef6	9515	0.013	0.0377	No
80	Skap2	9609	0.010	0.0332	No
81	Tial1	9615	0.010	0.0333	No
82	Tspan4	9732	0.006	0.0275	No
83	Adam9	9755	0.005	0.0265	No
84	Alox8	9905	0.000	0.0189	No
85	Evl	10284	-0.002	-0.0003	No
86	Cd276	10291	-0.003	-0.0005	No
87	Mapk14	10345	-0.004	-0.0031	No
88	Akt2	10373	-0.005	-0.0043	No
89	Amh	10441	-0.007	-0.0075	No
90	Myl12b	10473	-0.008	-0.0089	No
91	Dhx16	10557	-0.011	-0.0128	No
92	Syk	10613	-0.013	-0.0152	No
93	B4galt1	10770	-0.018	-0.0226	No
94	Fscn1	10886	-0.022	-0.0279	No
95	Adra1b	10901	-0.022	-0.0279	No
96	Nrxn2	10949	-0.024	-0.0296	No
97	Parva	10953	-0.024	-0.0291	No
98	Ldlrap1	10974	-0.025	-0.0294	No
99	Jup	11024	-0.026	-0.0311	No
100	Arpc2	11862	-0.053	-0.0722	No
101	Ctnnd1	11881	-0.054	-0.0716	No
102	Ptprc	12045	-0.060	-0.0782	No
103	Adam23	12113	-0.062	-0.0798	No
104	Actn4	12517	-0.077	-0.0981	No
105	Sorbs3	12567	-0.079	-0.0982	No
106	Itgb1	12641	-0.081	-0.0996	No
107	Vcam1	12720	-0.084	-0.1011	No
108	Sgce	12966	-0.093	-0.1109	No
109	Wasl	12979	-0.094	-0.1088	No
110	Ywhah	13134	-0.100	-0.1137	No
111	Map4k2	13138	-0.101	-0.1109	No
112	Tubg1	13143	-0.101	-0.1082	No
113	Cd34	13262	-0.106	-0.1111	No
114	Shc1	13597	-0.119	-0.1247	No
115	Gnai2	13599	-0.119	-0.1213	No
116	Rhof	13799	-0.128	-0.1277	No
117	Rac2	13866	-0.131	-0.1273	No
118	Atp1a3	14032	-0.137	-0.1317	No
119	Traf1	14221	-0.145	-0.1370	No
120	Rsu1	14222	-0.145	-0.1328	No
121	Tro	14496	-0.157	-0.1421	No
122	Pik3cb	14525	-0.158	-0.1389	No
123	Nf1	14584	-0.161	-0.1372	No
124	Sympk	14625	-0.162	-0.1345	No
125	Jam3	14835	-0.173	-0.1401	No
126	Actn3	14891	-0.175	-0.1378	No
127	Mapk11	15125	-0.186	-0.1443	No
128	Inppl1	15188	-0.189	-0.1419	No
129	Pik3r3	15511	-0.204	-0.1524	No
130	Nfasc	15639	-0.210	-0.1528	No
131	Fbn1	15658	-0.211	-0.1475	No
132	Cdh1	15722	-0.214	-0.1445	No
133	Shroom2	15766	-0.216	-0.1404	No
134	Stx4a	15891	-0.222	-0.1402	No
135	Icam2	16100	-0.233	-0.1441	No
136	Actb	16524	-0.254	-0.1582	No
137	Hras	16548	-0.255	-0.1520	No
138	Itga9	16653	-0.261	-0.1496	No
139	Cadm2	16822	-0.272	-0.1503	No
140	Layn	16823	-0.272	-0.1423	No
141	Vav2	17039	-0.283	-0.1450	No
142	Nexn	17212	-0.294	-0.1453	No
143	Crat	17229	-0.295	-0.1375	No
144	Vasp	17231	-0.295	-0.1289	No
145	Gtf2f1	17329	-0.301	-0.1251	No
146	Gamt	17337	-0.302	-0.1167	No
147	Itgb4	17400	-0.307	-0.1109	No
148	Cldn14	17538	-0.318	-0.1086	No
149	Itga2	17897	-0.345	-0.1168	No
150	Nectin4	17984	-0.353	-0.1109	No
151	Mapk13	17991	-0.353	-0.1009	No
152	Gnai1	18015	-0.356	-0.0917	No
153	Cnn2	18025	-0.356	-0.0818	No
154	Vwf	18160	-0.370	-0.0778	No
155	Thbs3	18228	-0.378	-0.0702	No
156	Bmp1	18339	-0.391	-0.0644	No
157	Nlgn3	18745	-0.446	-0.0721	No
158	Icam1	19020	-0.487	-0.0719	No
159	Cd274	19216	-0.530	-0.0664	No
160	Thy1	19264	-0.538	-0.0531	No
161	Irs1	19457	-0.601	-0.0454	No
162	Nrap	19541	-0.639	-0.0310	No
163	Tgfbi	19642	-0.713	-0.0153	No
164	Insig1	19670	-0.748	0.0052	No