Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	CMP.CMP_Pheno.cls#Group6_versus_Group8.CMP_Pheno.cls#Group6_versus_Group8_repos
Phenotype	CMP_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	5
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	-0.27192473
Normalized Enrichment Score (NES)	-1.308824
Nominal p-value	0.035416666
FDR q-value	0.25966
FWER p-Value	0.745

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Il2	66	0.863	0.0242	No
2	Cd80	81	0.829	0.0500	No
3	Il18rap	350	0.606	0.0558	No
4	Cd86	397	0.592	0.0724	No
5	Ets1	534	0.568	0.0836	No
6	Bcat1	655	0.543	0.0949	No
7	Ltb	1041	0.450	0.0896	No
8	Cd79a	1255	0.429	0.0925	No
9	Crtam	1429	0.413	0.0969	No
10	Mmp9	1500	0.409	0.1064	No
11	Tlr3	1523	0.408	0.1183	No
12	Il2ra	1643	0.400	0.1250	No
13	Map3k7	1779	0.384	0.1305	No
14	Irf7	1786	0.383	0.1424	No
15	Tlr2	2049	0.348	0.1402	No
16	Cfp	2363	0.317	0.1344	No
17	Elf4	2426	0.311	0.1412	No
18	Ube2n	2804	0.283	0.1310	No
19	Il12rb1	3237	0.262	0.1174	No
20	H2-Oa	3669	0.242	0.1031	No
21	Ctss	3891	0.233	0.0993	No
22	Lcp2	3967	0.228	0.1028	No
23	Abi1	4352	0.212	0.0900	No
24	Map4k1	4994	0.178	0.0630	No
25	Cdkn2a	5139	0.171	0.0612	No
26	Egfr	5238	0.166	0.0615	No
27	Ncf4	5261	0.165	0.0656	No
28	Il10	5336	0.161	0.0670	No
29	Nlrp3	6016	0.133	0.0367	No
30	Itgb2	6050	0.131	0.0392	No
31	Mtif2	6215	0.124	0.0348	No
32	Socs1	6230	0.124	0.0381	No
33	Ache	6419	0.117	0.0322	No
34	Rpl3l	6724	0.106	0.0201	No
35	Cd247	6843	0.101	0.0173	No
36	Lyn	7160	0.090	0.0041	No
37	Hdac9	7187	0.088	0.0056	No
38	Tnf	7315	0.084	0.0018	No
39	Cd74	7984	0.062	-0.0302	No
40	Cd96	7996	0.062	-0.0288	No
41	Stat4	8193	0.055	-0.0370	No
42	Flna	8276	0.052	-0.0396	No
43	Tap2	8296	0.052	-0.0389	No
44	Il12a	8327	0.051	-0.0388	No
45	Wars1	8339	0.051	-0.0377	No
46	Stat1	8342	0.051	-0.0362	No
47	Zap70	8443	0.048	-0.0398	No
48	Cd28	8821	0.035	-0.0578	No
49	F2r	8873	0.034	-0.0594	No
50	H2-Ob	9179	0.024	-0.0741	No
51	Il15	9258	0.021	-0.0774	No
52	Acvr2a	9375	0.017	-0.0828	No
53	Tgfb1	9534	0.012	-0.0905	No
54	Brca1	9584	0.011	-0.0926	No
55	Ccr1	9602	0.010	-0.0932	No
56	Ccnd3	9603	0.010	-0.0928	No
57	H2-DMb2	9610	0.010	-0.0928	No
58	Cd4	9731	0.006	-0.0988	No
59	Irf4	9908	0.000	-0.1077	No
60	Cxcl9	9925	0.000	-0.1086	No
61	Nme1	10262	-0.002	-0.1256	No
62	Itgal	10325	-0.004	-0.1287	No
63	Eif4g3	10502	-0.009	-0.1374	No
64	Dyrk3	10525	-0.010	-0.1382	No
65	Eif3j1	10597	-0.013	-0.1414	No
66	Glmn	10792	-0.018	-0.1507	No
67	Bcl3	10849	-0.021	-0.1529	No
68	Galnt1	10905	-0.022	-0.1550	No
69	Csf1	10955	-0.024	-0.1567	No
70	Ifnar2	11175	-0.031	-0.1668	No
71	Itk	11188	-0.032	-0.1664	No
72	Il6	11312	-0.036	-0.1715	No
73	Il2rg	11322	-0.036	-0.1708	No
74	Fgr	11544	-0.042	-0.1808	No
75	Il4ra	11788	-0.050	-0.1916	No
76	Eif3a	11801	-0.050	-0.1906	No
77	Spi1	11827	-0.051	-0.1902	No
78	Tgfb2	11871	-0.053	-0.1907	No
79	Pf4	11908	-0.055	-0.1908	No
80	Ptprc	12045	-0.060	-0.1958	No
81	Ccr2	12106	-0.062	-0.1968	No
82	Abce1	12125	-0.063	-0.1958	No
83	Il7	12162	-0.064	-0.1955	No
84	Hif1a	12165	-0.064	-0.1936	No
85	Socs5	12247	-0.068	-0.1956	No
86	Nck1	12250	-0.068	-0.1935	No
87	Hcls1	12301	-0.070	-0.1938	No
88	Traf2	12341	-0.071	-0.1935	No
89	Tpd52	12389	-0.073	-0.1936	No
90	Lif	12588	-0.080	-0.2011	No
91	Eif3d	12611	-0.080	-0.1997	No
92	Il16	12736	-0.085	-0.2033	No
93	Fas	12901	-0.090	-0.2087	No
94	Ly86	12909	-0.091	-0.2062	No
95	Cd47	12921	-0.091	-0.2038	No
96	St8sia4	12982	-0.094	-0.2039	No
97	Ikbkb	13153	-0.102	-0.2093	No
98	Gpr65	13215	-0.104	-0.2091	No
99	Ccr5	13458	-0.114	-0.2178	No
100	Jak2	13483	-0.115	-0.2153	No
101	Ly75	13492	-0.115	-0.2121	No
102	Il18	13709	-0.124	-0.2191	No
103	Prkcb	13732	-0.125	-0.2162	No
104	Srgn	13926	-0.133	-0.2218	No
105	Rpl9	14344	-0.151	-0.2382	No
106	Prkcg	14506	-0.157	-0.2414	No
107	Csk	14597	-0.161	-0.2408	No
108	Ptpn6	14655	-0.164	-0.2385	No
109	Eif5a	14774	-0.170	-0.2390	No
110	Apbb1	14800	-0.171	-0.2348	No
111	Ube2d1	14931	-0.177	-0.2358	No
112	Degs1	15050	-0.183	-0.2359	No
113	Mrpl3	15323	-0.195	-0.2436	No
114	Tlr1	15374	-0.198	-0.2398	No
115	Ripk2	15423	-0.200	-0.2358	No
116	Il27ra	15482	-0.202	-0.2323	No
117	Stab1	15571	-0.207	-0.2302	No
118	Npm1	15839	-0.219	-0.2368	No
119	Akt1	16046	-0.231	-0.2399	No
120	Capg	16111	-0.234	-0.2357	No
121	H2-DMa	16183	-0.238	-0.2317	No
122	Ccnd2	16223	-0.241	-0.2260	No
123	Tlr6	16867	-0.275	-0.2499	No
124	Trat1	16882	-0.276	-0.2418	No
125	Inhba	17474	-0.314	-0.2619	Yes
126	Rps3a1	17573	-0.321	-0.2566	Yes
127	Il1b	17603	-0.324	-0.2477	Yes
128	Ifngr2	17731	-0.330	-0.2437	Yes
129	Lck	17804	-0.336	-0.2366	Yes
130	Fcgr2b	18082	-0.361	-0.2391	Yes
131	Ifngr1	18214	-0.376	-0.2338	Yes
132	Cd1d2	18226	-0.377	-0.2223	Yes
133	Bcl10	18239	-0.379	-0.2108	Yes
134	Irf8	18253	-0.380	-0.1993	Yes
135	C2	18294	-0.385	-0.1890	Yes
136	Gcnt1	18511	-0.414	-0.1867	Yes
137	Tapbp	18576	-0.424	-0.1765	Yes
138	B2m	18580	-0.424	-0.1630	Yes
139	Tap1	18651	-0.434	-0.1527	Yes
140	Ccl5	18891	-0.465	-0.1500	Yes
141	Igsf6	18947	-0.475	-0.1376	Yes
142	Rps9	18965	-0.478	-0.1232	Yes
143	Icam1	19020	-0.487	-0.1104	Yes
144	Il11	19116	-0.504	-0.0991	Yes
145	Icosl	19162	-0.514	-0.0849	Yes
146	Was	19188	-0.520	-0.0696	Yes
147	Thy1	19264	-0.538	-0.0562	Yes
148	Psmb10	19275	-0.541	-0.0394	Yes
149	H2-Aa	19461	-0.605	-0.0295	Yes
150	Il4	19561	-0.653	-0.0136	Yes
151	Elane	19674	-0.758	0.0049	Yes