Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	CMP.CMP_Pheno.cls#Group3_versus_Group4.CMP_Pheno.cls#Group3_versus_Group4_repos
Phenotype	CMP_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_MYOGENESIS
Enrichment Score (ES)	-0.18600664
Normalized Enrichment Score (NES)	-0.7008165
Nominal p-value	0.94489795
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Cnn3	176	0.780	0.0162	No
2	Schip1	230	0.720	0.0368	No
3	Stc2	349	0.652	0.0518	No
4	Col15a1	373	0.640	0.0713	No
5	Ak1	539	0.588	0.0819	No
6	Tnnt1	1014	0.484	0.0734	No
7	Kifc3	1485	0.424	0.0632	No
8	Nos1	1552	0.416	0.0732	No
9	Tnnc1	1569	0.415	0.0858	No
10	Slc6a8	1596	0.413	0.0978	No
11	Csrp3	1720	0.397	0.1044	No
12	Ncam1	1853	0.381	0.1100	No
13	Mapk12	2086	0.360	0.1098	No
14	Kcnh1	2160	0.356	0.1175	No
15	Actn3	2308	0.340	0.1210	No
16	Dapk2	2429	0.330	0.1256	No
17	Myh11	2578	0.322	0.1284	No
18	Acsl1	2586	0.321	0.1384	No
19	Sptan1	2843	0.301	0.1351	No
20	Crat	2873	0.298	0.1433	No
21	Speg	3050	0.284	0.1435	No
22	Dmd	3168	0.274	0.1464	No
23	Mylk	3205	0.271	0.1533	No
24	Cdkn1a	3213	0.271	0.1617	No
25	Gaa	3244	0.269	0.1688	No
26	Tpd52l1	3732	0.241	0.1518	No
27	Syngr2	3924	0.232	0.1495	No
28	Myh9	4022	0.226	0.1519	No
29	Aebp1	4314	0.209	0.1438	No
30	Pkia	4449	0.204	0.1436	No
31	Tsc2	4590	0.196	0.1428	No
32	Gsn	4649	0.194	0.1461	No
33	Itgb5	4727	0.190	0.1483	No
34	Myo1c	4798	0.186	0.1508	No
35	Ptp4a3	4802	0.186	0.1566	No
36	Ache	4883	0.181	0.1584	No
37	Gpx3	4910	0.180	0.1629	No
38	Mapre3	4911	0.180	0.1687	No
39	Sh2b1	4956	0.178	0.1722	No
40	Mef2c	5018	0.175	0.1748	No
41	Actn2	5155	0.169	0.1733	No
42	Dtna	5202	0.167	0.1763	No
43	Dmpk	5405	0.159	0.1712	No
44	Adam12	5736	0.145	0.1590	No
45	Ifrd1	6003	0.137	0.1499	No
46	Tpm3	6522	0.117	0.1273	No
47	Smtn	6782	0.107	0.1176	No
48	App	6993	0.100	0.1101	No
49	Mylpf	7033	0.098	0.1113	No
50	Foxo4	7069	0.097	0.1127	No
51	Eno3	7166	0.093	0.1108	No
52	Pick1	7414	0.085	0.1009	No
53	Tgfb1	7717	0.074	0.0879	No
54	Tpm2	7799	0.071	0.0861	No
55	Reep1	7842	0.070	0.0862	No
56	Fdps	7871	0.069	0.0870	No
57	Plxnb2	8183	0.058	0.0731	No
58	Klf5	8707	0.041	0.0478	No
59	Col4a2	8771	0.039	0.0458	No
60	Tnnt3	9008	0.030	0.0348	No
61	Lama2	9114	0.027	0.0303	No
62	Pde4dip	9142	0.026	0.0297	No
63	Ryr1	9169	0.025	0.0292	No
64	Cox7a1	9312	0.020	0.0226	No
65	Sgcd	9775	0.006	-0.0007	No
66	Eif4a2	9835	0.004	-0.0036	No
67	Cfd	9924	0.001	-0.0080	No
68	Ldb3	9957	0.000	-0.0097	No
69	Adcy9	10117	-0.001	-0.0177	No
70	Gadd45b	10285	-0.006	-0.0260	No
71	Prnp	10592	-0.016	-0.0411	No
72	Pcx	10637	-0.017	-0.0428	No
73	Mras	10648	-0.018	-0.0427	No
74	Flii	11363	-0.040	-0.0778	No
75	Sirt2	11391	-0.041	-0.0778	No
76	Tagln	11438	-0.042	-0.0788	No
77	Mef2d	11468	-0.043	-0.0789	No
78	Sorbs3	11663	-0.049	-0.0872	No
79	Agrn	11802	-0.054	-0.0925	No
80	Rit1	11915	-0.058	-0.0963	No
81	Svil	11996	-0.060	-0.0984	No
82	Bin1	11998	-0.061	-0.0965	No
83	Pfkm	12156	-0.066	-0.1024	No
84	Nav2	12357	-0.070	-0.1103	No
85	Mef2a	12560	-0.076	-0.1182	No
86	Cox6a2	12758	-0.082	-0.1256	No
87	Akt2	12911	-0.088	-0.1305	No
88	Tnni2	12977	-0.090	-0.1309	No
89	Lpin1	13738	-0.119	-0.1657	No
90	Mybpc3	13852	-0.122	-0.1675	No
91	Sorbs1	14053	-0.130	-0.1735	No
92	Wwtr1	14238	-0.138	-0.1785	No
93	Igfbp7	14278	-0.140	-0.1759	No
94	Hdac5	14288	-0.140	-0.1719	No
95	Pygm	14457	-0.146	-0.1757	No
96	Pdlim7	14492	-0.147	-0.1727	No
97	Itgb1	14660	-0.155	-0.1762	No
98	Ablim1	14854	-0.164	-0.1807	Yes
99	Notch1	14921	-0.167	-0.1787	Yes
100	Ctf1	14960	-0.169	-0.1752	Yes
101	Hbegf	14963	-0.169	-0.1698	Yes
102	Col1a1	15045	-0.172	-0.1684	Yes
103	Aplnr	15060	-0.172	-0.1635	Yes
104	Bhlhe40	15156	-0.173	-0.1628	Yes
105	Nqo1	15174	-0.174	-0.1580	Yes
106	Fhl1	15179	-0.174	-0.1526	Yes
107	Atp6ap1	15212	-0.176	-0.1485	Yes
108	Large1	15243	-0.177	-0.1444	Yes
109	Ppfia4	15591	-0.192	-0.1558	Yes
110	Sparc	15788	-0.202	-0.1593	Yes
111	Lsp1	15810	-0.203	-0.1538	Yes
112	Cd36	15863	-0.206	-0.1497	Yes
113	Camk2b	15887	-0.208	-0.1442	Yes
114	Ocel1	16402	-0.234	-0.1628	Yes
115	Rb1	16487	-0.240	-0.1594	Yes
116	Cdh13	16614	-0.247	-0.1578	Yes
117	Myom1	16677	-0.252	-0.1528	Yes
118	Bag1	16691	-0.253	-0.1453	Yes
119	Atp2a1	16771	-0.258	-0.1410	Yes
120	Psen2	16822	-0.261	-0.1352	Yes
121	Sphk1	16983	-0.269	-0.1346	Yes
122	Sh3bgr	17127	-0.280	-0.1328	Yes
123	Gnao1	17347	-0.296	-0.1344	Yes
124	Agl	17656	-0.318	-0.1399	Yes
125	Itgb4	17685	-0.319	-0.1310	Yes
126	Ckb	17752	-0.325	-0.1239	Yes
127	Myl6b	17935	-0.341	-0.1221	Yes
128	Ckmt2	18425	-0.390	-0.1344	Yes
129	Kcnh2	18556	-0.403	-0.1280	Yes
130	Cryab	18736	-0.429	-0.1233	Yes
131	Igf1	18995	-0.473	-0.1211	Yes
132	Chrnb1	19108	-0.493	-0.1109	Yes
133	Fkbp1b	19281	-0.536	-0.1024	Yes
134	Myl4	19319	-0.547	-0.0866	Yes
135	Erbb3	19346	-0.555	-0.0700	Yes
136	Fgf2	19493	-0.611	-0.0577	Yes
137	Clu	19523	-0.626	-0.0389	Yes
138	Gabarapl2	19645	-0.718	-0.0219	Yes
139	Gja5	19732	-0.876	0.0020	Yes