Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	CMP.CMP_Pheno.cls#Group3_versus_Group4.CMP_Pheno.cls#Group3_versus_Group4_repos
Phenotype	CMP_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_APOPTOSIS
Enrichment Score (ES)	-0.19201699
Normalized Enrichment Score (NES)	-0.9031616
Nominal p-value	0.66536963
FDR q-value	1.0
FWER p-Value	0.998

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Bik	6	1.315	0.0413	No
2	Ccnd1	71	0.893	0.0662	No
3	Tnf	293	0.678	0.0764	No
4	Bcl2l2	304	0.673	0.0972	No
5	Eno2	393	0.634	0.1127	No
6	Lef1	464	0.609	0.1284	No
7	Gadd45a	601	0.571	0.1395	No
8	Bcl2l1	801	0.524	0.1459	No
9	Il18	903	0.505	0.1567	No
10	Bgn	998	0.487	0.1673	No
11	Lmna	1664	0.402	0.1462	No
12	Fas	2043	0.365	0.1384	No
13	Fdxr	2280	0.342	0.1372	No
14	Bax	2463	0.328	0.1383	No
15	Sptan1	2843	0.301	0.1285	No
16	Smad7	3043	0.284	0.1274	No
17	Cdkn1a	3213	0.271	0.1273	No
18	Aifm3	3220	0.270	0.1356	No
19	Casp3	3311	0.264	0.1393	No
20	Etf1	3422	0.258	0.1419	No
21	Sc5d	3450	0.256	0.1486	No
22	F2r	3581	0.248	0.1498	No
23	Casp4	3829	0.237	0.1447	No
24	Mgmt	3856	0.235	0.1508	No
25	Hmox1	3864	0.234	0.1579	No
26	Pmaip1	3964	0.229	0.1601	No
27	Dap	4319	0.209	0.1486	No
28	Dnaja1	4446	0.204	0.1487	No
29	Gsn	4649	0.194	0.1445	No
30	Cd69	4773	0.187	0.1442	No
31	Gpx3	4910	0.180	0.1429	No
32	Diablo	4988	0.176	0.1446	No
33	Nefh	5153	0.169	0.1415	No
34	Casp8	5180	0.168	0.1455	No
35	Dcn	5382	0.160	0.1403	No
36	Wee1	5418	0.158	0.1436	No
37	Ccnd2	5566	0.152	0.1409	No
38	Psen1	5727	0.145	0.1373	No
39	Cth	5791	0.143	0.1386	No
40	Gch1	5845	0.140	0.1403	No
41	Txnip	6243	0.128	0.1241	No
42	Ctnnb1	6384	0.123	0.1209	No
43	Bid	6410	0.122	0.1235	No
44	Jun	6492	0.118	0.1231	No
45	App	6993	0.100	0.1008	No
46	Emp1	7631	0.077	0.0708	No
47	Dap3	7652	0.076	0.0722	No
48	Casp2	7679	0.076	0.0732	No
49	Dnajc3	8449	0.050	0.0356	No
50	Ddit3	8583	0.045	0.0303	No
51	Tgfbr3	8802	0.038	0.0204	No
52	Sod1	9223	0.023	-0.0003	No
53	Pdcd4	9298	0.021	-0.0034	No
54	Slc20a1	9450	0.017	-0.0106	No
55	Sod2	9670	0.009	-0.0215	No
56	Lgals3	9708	0.008	-0.0231	No
57	Casp7	9844	0.004	-0.0299	No
58	Gadd45b	10285	-0.006	-0.0521	No
59	Ppp2r5b	10530	-0.014	-0.0640	No
60	H1f0	10620	-0.017	-0.0681	No
61	Plcb2	10880	-0.025	-0.0805	No
62	Sqstm1	11102	-0.032	-0.0907	No
63	Cd14	11547	-0.045	-0.1119	No
64	Top2a	11738	-0.052	-0.1199	No
65	Cdc25b	11861	-0.056	-0.1244	No
66	Bcl10	11927	-0.058	-0.1258	No
67	Tap1	12050	-0.062	-0.1301	No
68	Cflar	12072	-0.063	-0.1292	No
69	Cd44	12090	-0.063	-0.1281	No
70	Anxa1	12187	-0.066	-0.1309	No
71	Il6	12296	-0.070	-0.1341	No
72	Timp2	12517	-0.075	-0.1430	No
73	Dffa	12550	-0.076	-0.1422	No
74	Hmgb2	12587	-0.077	-0.1416	No
75	Rock1	12634	-0.078	-0.1415	No
76	Bcap31	12774	-0.083	-0.1460	No
77	Casp6	13046	-0.093	-0.1568	No
78	Crebbp	13049	-0.093	-0.1540	No
79	Btg2	13115	-0.095	-0.1543	No
80	Xiap	13177	-0.097	-0.1544	No
81	Ifngr1	13182	-0.098	-0.1515	No
82	Cyld	13312	-0.102	-0.1548	No
83	Retsat	13321	-0.103	-0.1520	No
84	Btg3	13367	-0.104	-0.1510	No
85	Tgfb2	13460	-0.108	-0.1523	No
86	Add1	13661	-0.115	-0.1588	No
87	Satb1	13856	-0.123	-0.1648	No
88	Vdac2	13875	-0.123	-0.1619	No
89	Gna15	14040	-0.129	-0.1661	No
90	Isg20	14197	-0.136	-0.1698	No
91	Bcl2l11	14206	-0.137	-0.1659	No
92	Pak1	14253	-0.139	-0.1638	No
93	Casp1	14292	-0.140	-0.1613	No
94	Rela	14293	-0.140	-0.1569	No
95	Ppt1	14331	-0.141	-0.1543	No
96	Ank	14399	-0.143	-0.1532	No
97	Rnasel	14979	-0.170	-0.1773	No
98	Birc3	15011	-0.171	-0.1735	No
99	Il1b	15050	-0.172	-0.1700	No
100	Pdgfrb	15155	-0.173	-0.1698	No
101	Tnfsf10	15592	-0.192	-0.1859	Yes
102	Gsr	15646	-0.195	-0.1825	Yes
103	Sat1	15711	-0.198	-0.1795	Yes
104	Cdkn1b	15818	-0.204	-0.1785	Yes
105	Gpx1	15928	-0.209	-0.1774	Yes
106	Ppp3r1	16018	-0.214	-0.1752	Yes
107	Mcl1	16028	-0.214	-0.1689	Yes
108	Cd38	16062	-0.216	-0.1637	Yes
109	Brca1	16123	-0.220	-0.1598	Yes
110	Dnm1l	16170	-0.223	-0.1551	Yes
111	Casp9	16192	-0.224	-0.1491	Yes
112	Ier3	16342	-0.232	-0.1494	Yes
113	Ebp	16477	-0.239	-0.1486	Yes
114	Rhot2	16490	-0.240	-0.1417	Yes
115	Rara	16630	-0.248	-0.1409	Yes
116	Ifitm3	16696	-0.253	-0.1362	Yes
117	Tnfrsf12a	16699	-0.253	-0.1283	Yes
118	Bmf	16745	-0.255	-0.1226	Yes
119	Timp3	16814	-0.260	-0.1178	Yes
120	Psen2	16822	-0.261	-0.1099	Yes
121	Rhob	17067	-0.276	-0.1136	Yes
122	Madd	17112	-0.280	-0.1070	Yes
123	Igf2r	17343	-0.296	-0.1094	Yes
124	Ptk2	17348	-0.297	-0.1002	Yes
125	Atf3	17473	-0.305	-0.0969	Yes
126	Irf1	17623	-0.315	-0.0946	Yes
127	Pea15a	17691	-0.319	-0.0879	Yes
128	Hgf	17919	-0.339	-0.0887	Yes
129	Tspo	17938	-0.341	-0.0789	Yes
130	Nedd9	18344	-0.384	-0.0874	Yes
131	Krt18	18512	-0.399	-0.0833	Yes
132	Dpyd	18685	-0.422	-0.0787	Yes
133	Gstm2	18691	-0.423	-0.0656	Yes
134	Mmp2	18797	-0.438	-0.0571	Yes
135	Cdk2	19007	-0.475	-0.0527	Yes
136	Cav1	19125	-0.497	-0.0430	Yes
137	Erbb3	19346	-0.555	-0.0367	Yes
138	Gpx4	19430	-0.583	-0.0225	Yes
139	Clu	19523	-0.626	-0.0074	Yes
140	Bnip3l	19531	-0.631	0.0122	Yes