Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	CMP.CMP_Pheno.cls#Group2_versus_Group3.CMP_Pheno.cls#Group2_versus_Group3_repos
Phenotype	CMP_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_MYOGENESIS
Enrichment Score (ES)	-0.24441619
Normalized Enrichment Score (NES)	-0.915685
Nominal p-value	0.58105266
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Gja5	38	0.912	0.0248	No
2	Igf1	59	0.855	0.0489	No
3	Gabarapl2	242	0.675	0.0595	No
4	Clu	391	0.608	0.0698	No
5	Bhlhe40	437	0.591	0.0848	No
6	Col4a2	539	0.562	0.0962	No
7	Sh3bgr	817	0.502	0.0968	No
8	Mras	843	0.498	0.1102	No
9	App	1169	0.449	0.1068	No
10	Itgb1	1231	0.443	0.1167	No
11	Bag1	1469	0.414	0.1168	No
12	Eif4a2	1521	0.407	0.1261	No
13	Flii	1539	0.404	0.1371	No
14	Actn3	1696	0.386	0.1405	No
15	Myo1c	1740	0.381	0.1495	No
16	Sptan1	1964	0.361	0.1487	No
17	Cryab	2424	0.327	0.1350	No
18	Gnao1	2516	0.320	0.1397	No
19	Cdh13	3916	0.233	0.0753	No
20	Myh9	4083	0.223	0.0734	No
21	Col15a1	4363	0.209	0.0653	No
22	Fgf2	4368	0.209	0.0712	No
23	Fhl1	4487	0.202	0.0712	No
24	Mylpf	4579	0.198	0.0723	No
25	Sphk1	4877	0.184	0.0626	No
26	Sirt2	4909	0.183	0.0664	No
27	Pkia	4966	0.180	0.0689	No
28	Wwtr1	5083	0.174	0.0681	No
29	Ckmt2	5211	0.168	0.0665	No
30	Kcnh1	5250	0.167	0.0695	No
31	Erbb3	5312	0.163	0.0712	No
32	Dapk2	5375	0.160	0.0727	No
33	Ifrd1	5401	0.159	0.0761	No
34	Mylk	5550	0.151	0.0730	No
35	Pfkm	5667	0.146	0.0713	No
36	Ldb3	5787	0.141	0.0694	No
37	Aplnr	5798	0.141	0.0730	No
38	Adam12	6361	0.117	0.0479	No
39	Tpm3	6515	0.111	0.0433	No
40	Kifc3	6516	0.111	0.0466	No
41	Plxnb2	6608	0.107	0.0451	No
42	Cdkn1a	6987	0.092	0.0285	No
43	Ablim1	7434	0.071	0.0079	No
44	Prnp	7685	0.061	-0.0031	No
45	Sparc	8003	0.049	-0.0178	No
46	Camk2b	8004	0.049	-0.0164	No
47	Nqo1	8043	0.047	-0.0169	No
48	Fdps	8067	0.046	-0.0167	No
49	Agrn	8255	0.038	-0.0252	No
50	Pcx	8327	0.034	-0.0278	No
51	Ppfia4	8353	0.033	-0.0281	No
52	Akt2	8423	0.030	-0.0307	No
53	Pick1	8481	0.028	-0.0328	No
54	Ak1	8509	0.027	-0.0333	No
55	Pygm	8532	0.026	-0.0337	No
56	Tnnc1	8536	0.026	-0.0331	No
57	Mybpc3	8550	0.025	-0.0330	No
58	Pde4dip	8634	0.022	-0.0366	No
59	Kcnh2	8886	0.012	-0.0490	No
60	Hbegf	8892	0.011	-0.0490	No
61	Myl6b	9237	0.000	-0.0665	No
62	Tnnt1	9244	0.000	-0.0668	No
63	Ckb	9246	0.000	-0.0668	No
64	Col1a1	9247	0.000	-0.0668	No
65	Stc2	9369	-0.003	-0.0729	No
66	Adcy9	9813	-0.019	-0.0949	No
67	Psen2	10026	-0.029	-0.1049	No
68	Lpin1	10124	-0.032	-0.1089	No
69	Slc6a8	10143	-0.033	-0.1088	No
70	Nav2	10209	-0.036	-0.1111	No
71	Ctf1	10333	-0.040	-0.1162	No
72	Mapre3	10426	-0.044	-0.1196	No
73	Bin1	10539	-0.048	-0.1239	No
74	Sorbs1	10543	-0.048	-0.1226	No
75	Schip1	10566	-0.049	-0.1223	No
76	Large1	10709	-0.055	-0.1279	No
77	Agl	11020	-0.069	-0.1417	No
78	Foxo4	11214	-0.077	-0.1492	No
79	Tpm2	11246	-0.078	-0.1485	No
80	Mef2a	11340	-0.083	-0.1508	No
81	Rb1	11388	-0.085	-0.1507	No
82	Ptp4a3	11431	-0.087	-0.1503	No
83	Myom1	11545	-0.092	-0.1534	No
84	Myh11	11669	-0.096	-0.1568	No
85	Dtna	11795	-0.101	-0.1602	No
86	Gadd45b	11876	-0.104	-0.1613	No
87	Sgcd	11980	-0.109	-0.1633	No
88	Hdac5	12262	-0.121	-0.1741	No
89	Lsp1	12388	-0.126	-0.1768	No
90	Ncam1	12458	-0.128	-0.1765	No
91	Svil	12473	-0.129	-0.1734	No
92	Itgb4	12868	-0.142	-0.1893	No
93	Ocel1	12922	-0.145	-0.1878	No
94	Ryr1	13059	-0.150	-0.1903	No
95	Myl4	13181	-0.156	-0.1919	No
96	Rit1	13866	-0.185	-0.2213	No
97	Gsn	14066	-0.195	-0.2257	No
98	Csrp3	14247	-0.205	-0.2289	No
99	Tsc2	14305	-0.207	-0.2257	No
100	Atp2a1	14674	-0.225	-0.2378	Yes
101	Dmd	14755	-0.229	-0.2351	Yes
102	Smtn	14823	-0.233	-0.2317	Yes
103	Notch1	14881	-0.236	-0.2277	Yes
104	Ache	14895	-0.237	-0.2214	Yes
105	Cox6a2	14982	-0.241	-0.2187	Yes
106	Eno3	15093	-0.246	-0.2171	Yes
107	Gaa	15140	-0.249	-0.2121	Yes
108	Fkbp1b	15181	-0.251	-0.2068	Yes
109	Sh2b1	15319	-0.258	-0.2062	Yes
110	Atp6ap1	15471	-0.266	-0.2061	Yes
111	Nos1	15913	-0.291	-0.2200	Yes
112	Tpd52l1	15973	-0.295	-0.2144	Yes
113	Igfbp7	16248	-0.311	-0.2192	Yes
114	Syngr2	16340	-0.316	-0.2145	Yes
115	Gpx3	16524	-0.328	-0.2142	Yes
116	Sorbs3	16545	-0.329	-0.2056	Yes
117	Klf5	16624	-0.334	-0.1998	Yes
118	Tgfb1	16886	-0.350	-0.2028	Yes
119	Cd36	17066	-0.363	-0.2012	Yes
120	Tagln	17360	-0.387	-0.2048	Yes
121	Acsl1	17400	-0.389	-0.1954	Yes
122	Lama2	17450	-0.394	-0.1863	Yes
123	Cox7a1	17476	-0.396	-0.1759	Yes
124	Chrnb1	17536	-0.400	-0.1672	Yes
125	Cfd	17795	-0.423	-0.1679	Yes
126	Crat	17992	-0.443	-0.1649	Yes
127	Tnnt3	18058	-0.449	-0.1550	Yes
128	Mef2c	18317	-0.482	-0.1540	Yes
129	Aebp1	18455	-0.499	-0.1464	Yes
130	Mef2d	18540	-0.513	-0.1356	Yes
131	Reep1	18971	-0.592	-0.1401	Yes
132	Dmpk	19190	-0.641	-0.1324	Yes
133	Tnni2	19201	-0.644	-0.1140	Yes
134	Itgb5	19244	-0.659	-0.0968	Yes
135	Mapk12	19380	-0.707	-0.0829	Yes
136	Cnn3	19430	-0.737	-0.0638	Yes
137	Pdlim7	19519	-0.780	-0.0453	Yes
138	Speg	19667	-0.923	-0.0257	Yes
139	Actn2	19729	-1.055	0.0021	Yes