DatasetCMP.CMP_Pheno.cls#Group2_versus_Group3.CMP_Pheno.cls#Group2_versus_Group3_repos
PhenotypeCMP_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class1
GeneSetHALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)0.52508265
Normalized Enrichment Score (NES)1.888757
Nominal p-value0.021696253
FDR q-value0.026508514
FWER p-Value0.024
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_G2M_CHECKPOINT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Hspa8201.0160.0199Yes
2Srsf1900.7860.0325Yes
3Kpnb12470.6730.0384Yes
4Hnrnpu3390.6320.0468Yes
5Lbr4150.5980.0553Yes
6Espl14890.5770.0634Yes
7Smc1a5050.5710.0744Yes
8Cdc65860.5490.0816Yes
9Chaf1a5980.5460.0923Yes
10Bcl36330.5390.1016Yes
11Xpo16460.5370.1121Yes
12Lmnb16490.5370.1231Yes
13Tfdp16880.5280.1320Yes
14Hnrnpd7130.5240.1415Yes
15Ncl8290.5000.1460Yes
16Aurkb8660.4920.1543Yes
17Kif49350.4820.1607Yes
18Ccna29390.4810.1705Yes
19Dr19530.4790.1797Yes
20Nasp10880.4600.1823Yes
21Pbk10990.4570.1912Yes
22Top2a11620.4500.1973Yes
23Bub111780.4480.2057Yes
24Prc111910.4470.2143Yes
25Odc112050.4460.2229Yes
26Incenp12770.4370.2282Yes
27Cdk112920.4340.2365Yes
28Kif1514050.4230.2395Yes
29Tpx215200.4070.2420Yes
30H2az115880.3980.2468Yes
31Hmmr15970.3960.2545Yes
32Nup5016130.3950.2619Yes
33Kif1116350.3920.2689Yes
34Tacc316360.3920.2770Yes
35Nolc116420.3910.2848Yes
36Fbxo516510.3900.2924Yes
37Aurka16920.3860.2983Yes
38Racgap116940.3860.3062Yes
39Nsd217600.3790.3107Yes
40Birc517840.3780.3173Yes
41Mybl217870.3770.3249Yes
42Uck218090.3740.3316Yes
43Atf518470.3700.3373Yes
44Mki6718690.3690.3438Yes
45Cdc25a18700.3680.3514Yes
46Rad2119010.3670.3574Yes
47Dbf419060.3660.3648Yes
48Cdc721550.3470.3592Yes
49Upf121810.3440.3650Yes
50Cdkn1b22040.3430.3710Yes
51Ttk22500.3400.3757Yes
52E2f322860.3380.3808Yes
53Ilf323710.3310.3834Yes
54Sap3023860.3300.3894Yes
55Mad2l123910.3290.3960Yes
56Numa126210.3150.3908Yes
57Ndc8026310.3140.3968Yes
58Mcm326430.3120.4027Yes
59Mcm226740.3100.4075Yes
60Ccnf27050.3080.4123Yes
61Sfpq28450.2980.4113Yes
62Prmt528500.2970.4173Yes
63Kif20b28700.2960.4224Yes
64Plk429290.2930.4254Yes
65Cenpe29660.2900.4296Yes
66H2bc1229740.2890.4352Yes
67Cdkn2c29770.2890.4410Yes
68Ccnt130000.2880.4458Yes
69Kif2230100.2870.4513Yes
70Rad23b30130.2870.4571Yes
71Cdc25b30840.2820.4593Yes
72Top131730.2780.4605Yes
73E2f432140.2750.4642Yes
74Cul132820.2710.4663Yes
75G3bp133080.2700.4706Yes
76Cenpf33190.2690.4756Yes
77Lig333820.2640.4779Yes
78Amd134030.2630.4823Yes
79Smc234580.2610.4849Yes
80Rad54l34890.2590.4887Yes
81Nek235700.2540.4898Yes
82Odf235990.2520.4936Yes
83Smarcc136210.2510.4977Yes
84Srsf1037460.2440.4964Yes
85Abl138050.2400.4983Yes
86Rpa238300.2380.5020Yes
87Tmpo39290.2320.5018Yes
88Snrpd139660.2300.5047Yes
89Slc38a139710.2290.5092Yes
90Smc441260.2220.5059Yes
91Chek141580.2210.5088Yes
92Ube2s42490.2170.5087Yes
93Plk142940.2140.5109Yes
94Ss1843790.2080.5109Yes
95Polq44800.2020.5099Yes
96Syncrip45710.1980.5094Yes
97Gspt146470.1950.5096Yes
98Prpf4b47590.1890.5078Yes
99Tra2b48280.1860.5082Yes
100Tnpo248330.1860.5118Yes
101Ythdc148470.1850.5149Yes
102Pafah1b148890.1840.5166Yes
103Mcm650050.1780.5144Yes
104Ezh250340.1770.5166Yes
105Mcm550430.1770.5199Yes
106Slc7a150500.1760.5232Yes
107Knl150840.1740.5251Yes
108Kif2c51930.1690.5230No
109Orc652810.1650.5220No
110Hmga1b53100.1630.5239No
111Pole55350.1510.5156No
112Suv39h156230.1470.5142No
113E2f257430.1430.5110No
114Rbl158650.1390.5077No
115Kif2359270.1370.5074No
116Cul560800.1300.5023No
117Kif5b63020.1200.4935No
118Stil63510.1180.4935No
119Cdc2764170.1150.4925No
120Prim264400.1140.4938No
121Ctcf65190.1110.4920No
122Meis165490.1090.4928No
123Exo166060.1070.4921No
124Hus166850.1040.4903No
125Notch268090.1000.4861No
126Jpt168270.0990.4872No
127Pola269380.0940.4836No
128Ccnb269570.0930.4846No
129Pds5b69600.0930.4864No
130Slc7a569730.0920.4877No
131Arid4a69890.0920.4888No
132Nusap172290.0810.4782No
133Smad372340.0810.4797No
134Mtf272480.0800.4807No
135Cks1b72590.0790.4818No
136Troap72750.0780.4826No
137Cbx173130.0770.4823No
138Hira74300.0710.4779No
139Pttg174430.0710.4787No
140Bard175670.0660.4738No
141Cks276360.0630.4716No
142Stag178650.0540.4611No
143Dkc179330.0510.4587No
144Casp8ap283300.0340.4392No
145Cul384460.0300.4339No
146Tle385270.0260.4304No
147Atrx85870.0240.4279No
148Mapk1486030.0230.4276No
149Cul4a87700.0160.4195No
150Dtymk87760.0160.4195No
151Mnat188870.0120.4142No
152Ewsr189590.0090.4107No
153Cdc4589860.0080.4096No
154Ube2c89930.0080.4094No
155Cdc2089940.0080.4096No
156Brca29473-0.0060.3853No
157Pura9603-0.0110.3789No
158Sqle9828-0.0190.3679No
159Tent4a9931-0.0240.3632No
160Kmt5a10015-0.0280.3595No
161Cdk410287-0.0390.3465No
162Wrn10419-0.0440.3407No
163Ddx39a10527-0.0480.3362No
164Gins210602-0.0500.3334No
165H2ax10766-0.0580.3263No
166Slc12a211019-0.0690.3149No
167Orc511160-0.0760.3093No
168Srsf211469-0.0880.2954No
169Nup9811522-0.0900.2946No
170Bub312446-0.1280.2500No
171Meis212465-0.1280.2518No
172Katna112591-0.1330.2481No
173Fancc12634-0.1340.2487No
174Rps6ka512710-0.1370.2477No
175Hmgb312719-0.1370.2501No
176Map3k2012838-0.1410.2470No
177E2f112872-0.1430.2483No
178H2az212948-0.1460.2474No
179Cenpa13183-0.1560.2387No
180Traip13330-0.1630.2346No
181Hif1a13552-0.1730.2269No
182Cdkn313940-0.1880.2110No
183Pml14154-0.2000.2042No
184Rasal214594-0.2210.1863No
185Dmd14755-0.2290.1829No
186Foxn314836-0.2340.1836No
187Myc15501-0.2680.1552No
188Efna516203-0.3080.1257No
189Stmn116569-0.3310.1139No
190Tgfb116886-0.3500.1050No
191Egf17333-0.3840.0901No
192Chmp1a17671-0.4120.0814No
193Marcks18252-0.4740.0615No
194Ccnd119518-0.7790.0129No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_G2M_CHECKPOINT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_G2M_CHECKPOINT: Random ES distribution   
Gene set null distribution of ES for HALLMARK_G2M_CHECKPOINT