| Dataset | CMP.CMP_Pheno.cls#Group2_versus_Group3.CMP_Pheno.cls#Group2_versus_Group3_repos |
| Phenotype | CMP_Pheno.cls#Group2_versus_Group3_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_ESTROGEN_RESPONSE_LATE |
| Enrichment Score (ES) | -0.22013772 |
| Normalized Enrichment Score (NES) | -0.9396041 |
| Nominal p-value | 0.527451 |
| FDR q-value | 1.0 |
| FWER p-Value | 1.0 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Myof | 13 | 1.075 | 0.0271 | No |
| 2 | Kcnk5 | 91 | 0.786 | 0.0435 | No |
| 3 | St6galnac2 | 364 | 0.621 | 0.0457 | No |
| 4 | Kif20a | 435 | 0.592 | 0.0574 | No |
| 5 | Cdc6 | 586 | 0.549 | 0.0639 | No |
| 6 | Chpt1 | 958 | 0.479 | 0.0574 | No |
| 7 | Top2a | 1162 | 0.450 | 0.0586 | No |
| 8 | Sgk1 | 1413 | 0.422 | 0.0568 | No |
| 9 | Ret | 1449 | 0.416 | 0.0658 | No |
| 10 | Bag1 | 1469 | 0.414 | 0.0755 | No |
| 11 | Tfpi2 | 1628 | 0.393 | 0.0776 | No |
| 12 | Farp1 | 1762 | 0.379 | 0.0806 | No |
| 13 | Lsr | 1896 | 0.367 | 0.0833 | No |
| 14 | Ptger3 | 1935 | 0.365 | 0.0908 | No |
| 15 | Btg3 | 2031 | 0.356 | 0.0951 | No |
| 16 | Aldh3a2 | 2165 | 0.346 | 0.0973 | No |
| 17 | Fkbp5 | 2182 | 0.344 | 0.1054 | No |
| 18 | Gla | 2228 | 0.341 | 0.1119 | No |
| 19 | Fos | 2334 | 0.334 | 0.1152 | No |
| 20 | Hspa4l | 2649 | 0.312 | 0.1072 | No |
| 21 | Mdk | 2710 | 0.308 | 0.1121 | No |
| 22 | Il6st | 2760 | 0.303 | 0.1174 | No |
| 23 | Fkbp4 | 2780 | 0.302 | 0.1243 | No |
| 24 | Plk4 | 2929 | 0.293 | 0.1243 | No |
| 25 | Dlg5 | 3127 | 0.280 | 0.1215 | No |
| 26 | Chst8 | 3668 | 0.248 | 0.1004 | No |
| 27 | Rbbp8 | 3755 | 0.244 | 0.1023 | No |
| 28 | Jak1 | 4327 | 0.211 | 0.0786 | No |
| 29 | Dnajc12 | 4340 | 0.210 | 0.0834 | No |
| 30 | Nab2 | 4459 | 0.204 | 0.0827 | No |
| 31 | Wfs1 | 4545 | 0.199 | 0.0835 | No |
| 32 | Frk | 4557 | 0.198 | 0.0881 | No |
| 33 | Rnaseh2a | 4691 | 0.192 | 0.0863 | No |
| 34 | Cox6c | 4705 | 0.192 | 0.0905 | No |
| 35 | Elovl5 | 4753 | 0.189 | 0.0930 | No |
| 36 | Etfb | 4810 | 0.187 | 0.0950 | No |
| 37 | Xbp1 | 4956 | 0.181 | 0.0923 | No |
| 38 | Gper1 | 5059 | 0.176 | 0.0917 | No |
| 39 | Tspan13 | 5093 | 0.174 | 0.0945 | No |
| 40 | Slc16a1 | 5143 | 0.171 | 0.0964 | No |
| 41 | Sord | 5251 | 0.167 | 0.0952 | No |
| 42 | Batf | 5269 | 0.166 | 0.0987 | No |
| 43 | Slc29a1 | 5272 | 0.166 | 0.1029 | No |
| 44 | Homer2 | 5363 | 0.161 | 0.1024 | No |
| 45 | Isg20 | 5439 | 0.157 | 0.1026 | No |
| 46 | Cish | 5463 | 0.155 | 0.1055 | No |
| 47 | Slc22a5 | 5465 | 0.155 | 0.1094 | No |
| 48 | Abhd2 | 5856 | 0.140 | 0.0932 | No |
| 49 | Pgr | 5861 | 0.139 | 0.0965 | No |
| 50 | Amfr | 5931 | 0.136 | 0.0966 | No |
| 51 | Car12 | 6162 | 0.126 | 0.0881 | No |
| 52 | Stil | 6351 | 0.118 | 0.0816 | No |
| 53 | Plxnb1 | 6539 | 0.109 | 0.0748 | No |
| 54 | Tjp3 | 6649 | 0.105 | 0.0720 | No |
| 55 | Cdh1 | 6702 | 0.103 | 0.0720 | No |
| 56 | Slc7a5 | 6973 | 0.092 | 0.0606 | No |
| 57 | S100a9 | 7158 | 0.084 | 0.0534 | No |
| 58 | Ptges | 7189 | 0.083 | 0.0540 | No |
| 59 | Zfp36 | 7363 | 0.074 | 0.0471 | No |
| 60 | Aff1 | 7389 | 0.073 | 0.0478 | No |
| 61 | Jak2 | 7475 | 0.069 | 0.0452 | No |
| 62 | Idh2 | 7730 | 0.060 | 0.0338 | No |
| 63 | Flnb | 8061 | 0.046 | 0.0182 | No |
| 64 | Siah2 | 8083 | 0.045 | 0.0183 | No |
| 65 | Itpk1 | 8212 | 0.040 | 0.0128 | No |
| 66 | Ptpn6 | 8218 | 0.039 | 0.0135 | No |
| 67 | Tnnc1 | 8536 | 0.026 | -0.0019 | No |
| 68 | Pkp3 | 8732 | 0.018 | -0.0114 | No |
| 69 | Dcxr | 8812 | 0.015 | -0.0151 | No |
| 70 | Cdc20 | 8994 | 0.008 | -0.0241 | No |
| 71 | Fgfr3 | 9026 | 0.007 | -0.0255 | No |
| 72 | Ckb | 9246 | 0.000 | -0.0366 | No |
| 73 | Fdft1 | 9663 | -0.013 | -0.0575 | No |
| 74 | Sfn | 9895 | -0.022 | -0.0687 | No |
| 75 | Tob1 | 9991 | -0.027 | -0.0728 | No |
| 76 | Gjb3 | 10313 | -0.039 | -0.0882 | No |
| 77 | Scube2 | 10326 | -0.040 | -0.0878 | No |
| 78 | Mapt | 10396 | -0.043 | -0.0902 | No |
| 79 | Klf4 | 10516 | -0.047 | -0.0950 | No |
| 80 | Dnajc1 | 10524 | -0.047 | -0.0941 | No |
| 81 | Llgl2 | 10567 | -0.049 | -0.0950 | No |
| 82 | Gins2 | 10602 | -0.050 | -0.0954 | No |
| 83 | Ass1 | 10698 | -0.055 | -0.0989 | No |
| 84 | Large1 | 10709 | -0.055 | -0.0980 | No |
| 85 | Cd44 | 10868 | -0.062 | -0.1044 | No |
| 86 | Add3 | 10940 | -0.065 | -0.1063 | No |
| 87 | Impa2 | 10986 | -0.068 | -0.1069 | No |
| 88 | Scarb1 | 10990 | -0.068 | -0.1053 | No |
| 89 | Opn3 | 11640 | -0.095 | -0.1359 | No |
| 90 | Dhcr7 | 11756 | -0.099 | -0.1392 | No |
| 91 | Mettl3 | 11908 | -0.105 | -0.1442 | No |
| 92 | Prkar2b | 12061 | -0.112 | -0.1490 | No |
| 93 | Id2 | 12125 | -0.115 | -0.1493 | No |
| 94 | Anxa9 | 12235 | -0.120 | -0.1517 | No |
| 95 | Blvrb | 12639 | -0.135 | -0.1688 | No |
| 96 | Dynlt3 | 12768 | -0.139 | -0.1717 | No |
| 97 | Rab31 | 13051 | -0.150 | -0.1822 | No |
| 98 | Mest | 13112 | -0.152 | -0.1814 | No |
| 99 | Rabep1 | 13120 | -0.152 | -0.1778 | No |
| 100 | St14 | 13204 | -0.157 | -0.1780 | No |
| 101 | Nrip1 | 13384 | -0.165 | -0.1828 | No |
| 102 | Ugdh | 13393 | -0.165 | -0.1790 | No |
| 103 | Tiam1 | 13471 | -0.169 | -0.1785 | No |
| 104 | Cav1 | 13556 | -0.173 | -0.1783 | No |
| 105 | Car2 | 13705 | -0.179 | -0.1813 | No |
| 106 | Tmprss3 | 13822 | -0.183 | -0.1824 | No |
| 107 | Snx10 | 13919 | -0.188 | -0.1825 | No |
| 108 | Prlr | 14318 | -0.208 | -0.1974 | No |
| 109 | Slc26a2 | 14417 | -0.211 | -0.1969 | No |
| 110 | Slc1a4 | 14441 | -0.213 | -0.1926 | No |
| 111 | Fabp5 | 14458 | -0.214 | -0.1879 | No |
| 112 | Mapk13 | 14564 | -0.219 | -0.1876 | No |
| 113 | Rapgefl1 | 14577 | -0.220 | -0.1825 | No |
| 114 | Pdzk1 | 14719 | -0.228 | -0.1838 | No |
| 115 | Myb | 14768 | -0.230 | -0.1803 | No |
| 116 | Nxt1 | 15114 | -0.247 | -0.1915 | No |
| 117 | Unc13b | 15676 | -0.276 | -0.2130 | Yes |
| 118 | Ncor2 | 15683 | -0.277 | -0.2062 | Yes |
| 119 | Abca3 | 15760 | -0.282 | -0.2028 | Yes |
| 120 | Ppif | 15772 | -0.282 | -0.1960 | Yes |
| 121 | Atp2b4 | 15972 | -0.295 | -0.1986 | Yes |
| 122 | Tpd52l1 | 15973 | -0.295 | -0.1910 | Yes |
| 123 | Tst | 16368 | -0.318 | -0.2028 | Yes |
| 124 | Cyp26b1 | 16372 | -0.319 | -0.1947 | Yes |
| 125 | Cacna2d2 | 16407 | -0.321 | -0.1882 | Yes |
| 126 | Arl3 | 16635 | -0.334 | -0.1911 | Yes |
| 127 | Slc24a3 | 16675 | -0.337 | -0.1844 | Yes |
| 128 | Pdcd4 | 16811 | -0.345 | -0.1823 | Yes |
| 129 | Aldh3b1 | 16836 | -0.347 | -0.1746 | Yes |
| 130 | Plaat3 | 16880 | -0.350 | -0.1678 | Yes |
| 131 | Igfbp4 | 16898 | -0.351 | -0.1596 | Yes |
| 132 | Mocs2 | 16953 | -0.355 | -0.1532 | Yes |
| 133 | Dusp2 | 17474 | -0.396 | -0.1694 | Yes |
| 134 | Bcl2 | 17523 | -0.400 | -0.1616 | Yes |
| 135 | Perp | 17525 | -0.400 | -0.1513 | Yes |
| 136 | Gfus | 17656 | -0.411 | -0.1473 | Yes |
| 137 | Hmgcs2 | 17827 | -0.425 | -0.1450 | Yes |
| 138 | Ltf | 17835 | -0.426 | -0.1343 | Yes |
| 139 | Olfm1 | 18171 | -0.462 | -0.1394 | Yes |
| 140 | Cd9 | 18191 | -0.465 | -0.1284 | Yes |
| 141 | Plac1 | 18223 | -0.469 | -0.1179 | Yes |
| 142 | Scnn1a | 18443 | -0.498 | -0.1162 | Yes |
| 143 | Xrcc3 | 18559 | -0.516 | -0.1087 | Yes |
| 144 | Sult2b1 | 18843 | -0.566 | -0.1085 | Yes |
| 145 | Slc27a2 | 18908 | -0.579 | -0.0968 | Yes |
| 146 | Celsr2 | 18940 | -0.585 | -0.0833 | Yes |
| 147 | Rps6ka2 | 19020 | -0.601 | -0.0718 | Yes |
| 148 | Gale | 19222 | -0.651 | -0.0652 | Yes |
| 149 | Papss2 | 19498 | -0.769 | -0.0594 | Yes |
| 150 | Ccnd1 | 19518 | -0.779 | -0.0402 | Yes |
| 151 | Slc2a8 | 19615 | -0.859 | -0.0229 | Yes |
| 152 | Il17rb | 19753 | -1.192 | 0.0009 | Yes |

