Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	CMP.CMP_Pheno.cls#Group2_versus_Group3.CMP_Pheno.cls#Group2_versus_Group3_repos
Phenotype	CMP_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.18326908
Normalized Enrichment Score (NES)	-0.79502505
Nominal p-value	0.8577075
FDR q-value	0.9955657
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Hspa1a	65	0.841	0.0176	No
2	Itgam	69	0.831	0.0380	No
3	Serpinc1	149	0.744	0.0524	No
4	Pim1	229	0.686	0.0654	No
5	Gp1ba	300	0.648	0.0779	No
6	Clu	391	0.608	0.0884	No
7	C1qc	407	0.601	0.1026	No
8	Col4a2	539	0.562	0.1098	No
9	Prep	980	0.474	0.0992	No
10	Rce1	1193	0.447	0.0995	No
11	Adam9	1504	0.408	0.0938	No
12	Dock9	1615	0.394	0.0980	No
13	Tfpi2	1628	0.393	0.1071	No
14	Irf1	1841	0.371	0.1055	No
15	Olr1	2310	0.335	0.0899	No
16	Lcp2	2313	0.335	0.0981	No
17	Hspa5	2387	0.330	0.1026	No
18	Pla2g4a	2586	0.317	0.1003	No
19	F10	2612	0.315	0.1069	No
20	Cp	2744	0.305	0.1078	No
21	Ctss	2828	0.299	0.1109	No
22	Usp14	2927	0.293	0.1132	No
23	Irf7	2984	0.289	0.1175	No
24	Plscr1	3035	0.285	0.1220	No
25	Cpm	3281	0.271	0.1163	No
26	Cd46	3473	0.260	0.1130	No
27	Ctsl	3581	0.253	0.1138	No
28	Prss36	3809	0.239	0.1082	No
29	Cdh13	3916	0.233	0.1085	No
30	Mmp14	3944	0.231	0.1129	No
31	Msrb1	3974	0.229	0.1171	No
32	Pclo	4009	0.227	0.1210	No
33	Kynu	4027	0.227	0.1257	No
34	Vcpip1	4060	0.225	0.1297	No
35	Dock4	4208	0.219	0.1276	No
36	Gca	4313	0.212	0.1276	No
37	Pik3r5	4339	0.210	0.1315	No
38	Rnf4	4624	0.196	0.1219	No
39	Kcnip2	4873	0.185	0.1138	No
40	Zfpm2	4948	0.181	0.1145	No
41	Lamp2	5109	0.173	0.1107	No
42	Lap3	5112	0.172	0.1148	No
43	Lrp1	5381	0.160	0.1051	No
44	Scg3	5507	0.153	0.1025	No
45	Timp2	5555	0.150	0.1039	No
46	F7	5606	0.148	0.1050	No
47	Prdm4	5660	0.146	0.1059	No
48	C1qa	5913	0.137	0.0965	No
49	Rabif	5967	0.135	0.0971	No
50	Usp8	6025	0.133	0.0975	No
51	Lgals3	6055	0.132	0.0993	No
52	Calm3	6261	0.122	0.0919	No
53	C3	6282	0.121	0.0938	No
54	Cebpb	6328	0.119	0.0945	No
55	Maff	6376	0.117	0.0950	No
56	Usp16	6497	0.111	0.0916	No
57	Grb2	7016	0.090	0.0675	No
58	S100a9	7158	0.084	0.0624	No
59	Ppp4c	7182	0.083	0.0632	No
60	F8	7315	0.077	0.0584	No
61	Jak2	7475	0.069	0.0520	No
62	Fcnb	7635	0.063	0.0455	No
63	Dyrk2	8098	0.044	0.0230	No
64	Gzmk	8167	0.041	0.0206	No
65	Gnai2	8179	0.041	0.0210	No
66	Gnai3	8235	0.039	0.0192	No
67	Pik3ca	8241	0.038	0.0199	No
68	Calm1	8289	0.036	0.0184	No
69	Raf1	8295	0.036	0.0190	No
70	F5	8766	0.017	-0.0045	No
71	F3	8925	0.011	-0.0123	No
72	Ctsb	8977	0.009	-0.0147	No
73	Gata3	9014	0.007	-0.0164	No
74	Rbsn	9202	0.001	-0.0259	No
75	Gmfb	9216	0.001	-0.0265	No
76	Casp1	9300	-0.000	-0.0307	No
77	Sirt6	9451	-0.005	-0.0383	No
78	Kif2a	9524	-0.008	-0.0418	No
79	Ctsc	9601	-0.011	-0.0454	No
80	Ang	9664	-0.013	-0.0482	No
81	Klkb1	9740	-0.016	-0.0516	No
82	Gngt2	9837	-0.020	-0.0560	No
83	Sh2b3	9903	-0.023	-0.0588	No
84	Pdp1	9958	-0.025	-0.0609	No
85	Gp9	10095	-0.031	-0.0671	No
86	Usp15	10299	-0.039	-0.0764	No
87	Was	10604	-0.051	-0.0907	No
88	Dgkg	10654	-0.053	-0.0919	No
89	Lta4h	10669	-0.054	-0.0912	No
90	Lyn	10738	-0.056	-0.0933	No
91	Cdk5r1	10871	-0.062	-0.0985	No
92	Ctsd	11005	-0.068	-0.1036	No
93	Gng2	11358	-0.083	-0.1195	No
94	Gpd2	11530	-0.091	-0.1259	No
95	Cr2	11563	-0.092	-0.1253	No
96	Zeb1	11783	-0.100	-0.1340	No
97	Plek	11891	-0.105	-0.1368	No
98	Stx4a	12115	-0.114	-0.1453	No
99	Rasgrp1	12197	-0.118	-0.1466	No
100	Lck	12306	-0.122	-0.1490	No
101	Fn1	12429	-0.127	-0.1521	No
102	Cblb	12460	-0.128	-0.1505	No
103	Prcp	12684	-0.136	-0.1585	No
104	Gnb2	12750	-0.138	-0.1583	No
105	Dgkh	12751	-0.138	-0.1549	No
106	Il6	12773	-0.139	-0.1525	No
107	Akap10	12949	-0.146	-0.1578	No
108	Irf2	12950	-0.146	-0.1542	No
109	Xpnpep1	12986	-0.147	-0.1523	No
110	Plg	13032	-0.149	-0.1509	No
111	S100a13	13038	-0.149	-0.1475	No
112	Psen1	13380	-0.165	-0.1608	No
113	Car2	13705	-0.179	-0.1729	No
114	Tnfaip3	13738	-0.180	-0.1700	No
115	Ctso	13741	-0.180	-0.1657	No
116	Casp4	13756	-0.181	-0.1619	No
117	C2	13965	-0.190	-0.1678	No
118	Csrp1	14102	-0.197	-0.1698	No
119	Atox1	14148	-0.200	-0.1672	No
120	Pfn1	14384	-0.210	-0.1739	No
121	Plaur	14469	-0.214	-0.1729	No
122	Ehd1	14539	-0.218	-0.1710	No
123	C9	14613	-0.222	-0.1692	No
124	Fyn	14848	-0.234	-0.1754	No
125	Dpp4	14988	-0.241	-0.1765	No
126	Casp7	14997	-0.241	-0.1709	No
127	Casp3	15241	-0.254	-0.1770	Yes
128	Src	15345	-0.259	-0.1758	Yes
129	Gnb4	15391	-0.262	-0.1716	Yes
130	Mmp8	15565	-0.270	-0.1737	Yes
131	Brpf3	15608	-0.272	-0.1691	Yes
132	Lgmn	15718	-0.279	-0.1677	Yes
133	Spock2	15813	-0.284	-0.1654	Yes
134	Dock10	15856	-0.288	-0.1605	Yes
135	Notch4	15944	-0.293	-0.1576	Yes
136	Anxa5	16078	-0.300	-0.1570	Yes
137	Rhog	16149	-0.304	-0.1530	Yes
138	Pik3cg	16161	-0.305	-0.1460	Yes
139	Ctsh	16244	-0.310	-0.1425	Yes
140	Lipa	16473	-0.325	-0.1460	Yes
141	L3mbtl4	16605	-0.333	-0.1445	Yes
142	Ppp2cb	16741	-0.342	-0.1429	Yes
143	Cd36	17066	-0.363	-0.1504	Yes
144	Phex	17095	-0.365	-0.1428	Yes
145	Prkcd	17303	-0.381	-0.1439	Yes
146	Casp9	17315	-0.382	-0.1349	Yes
147	Dusp6	17361	-0.387	-0.1277	Yes
148	Psmb9	17441	-0.393	-0.1219	Yes
149	Dusp5	17473	-0.396	-0.1137	Yes
150	Cpq	17563	-0.403	-0.1082	Yes
151	Mmp15	17631	-0.408	-0.1015	Yes
152	Ltf	17835	-0.426	-0.1013	Yes
153	Fdx1	18459	-0.500	-0.1207	Yes
154	Serpinb2	18480	-0.503	-0.1092	Yes
155	Pcsk9	18539	-0.512	-0.0995	Yes
156	Kcnip3	18677	-0.534	-0.0932	Yes
157	Pdgfb	18754	-0.549	-0.0835	Yes
158	Fcer1g	18814	-0.561	-0.0726	Yes
159	Ccl5	18965	-0.590	-0.0656	Yes
160	Cfb	18978	-0.593	-0.0515	Yes
161	Apoc1	19001	-0.597	-0.0378	Yes
162	Hnf4a	19576	-0.827	-0.0465	Yes
163	Actn2	19729	-1.055	-0.0281	Yes
164	Me1	19755	-1.217	0.0008	Yes