Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	CMP.CMP_Pheno.cls#Group2_versus_Group3.CMP_Pheno.cls#Group2_versus_Group3_repos
Phenotype	CMP_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	-0.22944121
Normalized Enrichment Score (NES)	-0.9152332
Nominal p-value	0.582505
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Prkcg	12	1.078	0.0266	No
2	Dyrk3	34	0.919	0.0487	No
3	Ccr2	212	0.697	0.0572	No
4	Brca1	217	0.696	0.0746	No
5	Il18rap	620	0.543	0.0678	No
6	Bcl3	633	0.539	0.0807	No
7	Il4ra	891	0.490	0.0800	No
8	Icam1	937	0.482	0.0898	No
9	Eif3a	1028	0.468	0.0971	No
10	Ccr5	1055	0.465	0.1075	No
11	Irf4	1156	0.450	0.1137	No
12	Akt1	1543	0.404	0.1042	No
13	Zap70	1590	0.397	0.1119	No
14	Acvr2a	1963	0.361	0.1021	No
15	Il2ra	2004	0.358	0.1091	No
16	Ccr1	2091	0.351	0.1135	No
17	Gpr65	2193	0.343	0.1170	No
18	Lcp2	2313	0.335	0.1194	No
19	Ube2n	2509	0.321	0.1176	No
20	Lif	2528	0.319	0.1247	No
21	Il1b	2557	0.318	0.1313	No
22	Abce1	2691	0.309	0.1323	No
23	Ets1	2747	0.304	0.1372	No
24	Ctss	2828	0.299	0.1406	No
25	Map4k1	2978	0.289	0.1403	No
26	Irf7	2984	0.289	0.1474	No
27	Trat1	3344	0.267	0.1358	No
28	Galnt1	3356	0.266	0.1420	No
29	Fas	3637	0.250	0.1340	No
30	Hcls1	3729	0.245	0.1356	No
31	Nck1	3739	0.245	0.1413	No
32	Ly75	3750	0.244	0.1469	No
33	Tgfb2	4187	0.220	0.1302	No
34	Tapbp	4590	0.197	0.1147	No
35	Cd86	4630	0.195	0.1177	No
36	Npm1	4703	0.192	0.1188	No
37	Eif3d	4708	0.192	0.1234	No
38	Rpl3l	4864	0.185	0.1202	No
39	Wars1	5098	0.173	0.1127	No
40	Il27ra	5369	0.160	0.1030	No
41	Il4	5462	0.155	0.1022	No
42	Traf2	5694	0.144	0.0941	No
43	Cdkn2a	5867	0.139	0.0888	No
44	Bcl10	6054	0.132	0.0827	No
45	Stat1	6115	0.128	0.0828	No
46	Map3k7	6354	0.118	0.0737	No
47	Tap1	6403	0.115	0.0741	No
48	Tpd52	6524	0.110	0.0708	No
49	Eif3j1	6593	0.107	0.0700	No
50	Rpl9	6655	0.105	0.0696	No
51	Il7	6715	0.103	0.0692	No
52	Il2	6737	0.102	0.0707	No
53	H2-DMb2	6844	0.098	0.0677	No
54	Bcat1	6866	0.098	0.0691	No
55	Stab1	6928	0.095	0.0684	No
56	Cxcl9	7032	0.089	0.0654	No
57	Inhba	7253	0.079	0.0562	No
58	Fcgr2b	7337	0.076	0.0539	No
59	Icosl	7397	0.073	0.0527	No
60	Jak2	7475	0.069	0.0505	No
61	Ptprc	7589	0.065	0.0464	No
62	Thy1	7604	0.065	0.0473	No
63	Cd47	7627	0.064	0.0478	No
64	Ifngr1	8080	0.045	0.0259	No
65	Eif4g3	8171	0.041	0.0224	No
66	Ptpn6	8218	0.039	0.0210	No
67	Mmp9	8627	0.022	0.0008	No
68	Nlrp3	8699	0.020	-0.0023	No
69	F2r	8782	0.016	-0.0061	No
70	Mrpl3	8789	0.016	-0.0060	No
71	Flna	8815	0.015	-0.0069	No
72	Abi1	9072	0.005	-0.0199	No
73	Rps9	9232	0.000	-0.0280	No
74	Apbb1	9293	-0.000	-0.0310	No
75	Cd28	9306	-0.001	-0.0316	No
76	Ripk2	9568	-0.010	-0.0447	No
77	Il2rg	9657	-0.013	-0.0488	No
78	St8sia4	10139	-0.033	-0.0725	No
79	Srgn	10206	-0.036	-0.0750	No
80	Socs1	10222	-0.036	-0.0748	No
81	Tlr6	10568	-0.049	-0.0911	No
82	Was	10604	-0.051	-0.0916	No
83	Nme1	10640	-0.053	-0.0921	No
84	Lyn	10738	-0.056	-0.0956	No
85	Tlr2	11274	-0.080	-0.1209	No
86	Tap2	11660	-0.096	-0.1381	No
87	Eif5a	12028	-0.111	-0.1540	No
88	Tlr3	12155	-0.116	-0.1575	No
89	Ifnar2	12190	-0.117	-0.1563	No
90	Lck	12306	-0.122	-0.1590	No
91	Fgr	12453	-0.128	-0.1633	No
92	Degs1	12580	-0.133	-0.1663	No
93	Ccnd3	12630	-0.134	-0.1654	No
94	Il6	12773	-0.139	-0.1692	No
95	B2m	12837	-0.141	-0.1688	No
96	Ikbkb	13218	-0.157	-0.1842	No
97	H2-Aa	13250	-0.159	-0.1818	No
98	Cd74	13451	-0.168	-0.1877	No
99	Il10	13466	-0.169	-0.1842	No
100	Hif1a	13552	-0.173	-0.1842	No
101	Stat4	13706	-0.179	-0.1874	No
102	Rps3a1	13873	-0.186	-0.1912	No
103	C2	13965	-0.190	-0.1911	No
104	Cd79a	13971	-0.190	-0.1865	No
105	Glmn	14191	-0.202	-0.1926	No
106	Socs5	14313	-0.207	-0.1936	No
107	Elf4	14423	-0.212	-0.1938	No
108	Il11	14501	-0.216	-0.1922	No
109	H2-Ob	14652	-0.224	-0.1942	No
110	Itgal	14840	-0.234	-0.1979	No
111	Ache	14895	-0.237	-0.1946	No
112	Itk	14926	-0.238	-0.1902	No
113	Egfr	14999	-0.242	-0.1878	No
114	Ube2d1	15032	-0.243	-0.1833	No
115	Crtam	15277	-0.256	-0.1893	No
116	Il12a	15506	-0.268	-0.1941	No
117	Csk	15864	-0.288	-0.2050	No
118	Psmb10	15868	-0.288	-0.1979	No
119	Ccnd2	16411	-0.321	-0.2175	No
120	Il18	16647	-0.335	-0.2210	Yes
121	Spi1	16766	-0.343	-0.2184	Yes
122	Il16	16824	-0.346	-0.2125	Yes
123	Igsf6	16860	-0.348	-0.2055	Yes
124	Tgfb1	16886	-0.350	-0.1980	Yes
125	Cd80	17085	-0.364	-0.1989	Yes
126	Ly86	17134	-0.368	-0.1921	Yes
127	H2-Oa	17157	-0.369	-0.1839	Yes
128	Cfp	17233	-0.375	-0.1783	Yes
129	Mtif2	17247	-0.376	-0.1694	Yes
130	Gcnt1	17285	-0.379	-0.1617	Yes
131	Prkcb	17543	-0.401	-0.1647	Yes
132	Cd1d2	17686	-0.414	-0.1615	Yes
133	Csf1	17808	-0.424	-0.1570	Yes
134	Il15	17999	-0.443	-0.1555	Yes
135	Ncf4	18071	-0.451	-0.1478	Yes
136	Ltb	18195	-0.465	-0.1423	Yes
137	Capg	18254	-0.474	-0.1333	Yes
138	Elane	18279	-0.477	-0.1225	Yes
139	Tnf	18296	-0.478	-0.1113	Yes
140	Cd247	18400	-0.494	-0.1041	Yes
141	Cd4	18425	-0.496	-0.0928	Yes
142	Il12rb1	18449	-0.499	-0.0814	Yes
143	Ifngr2	18481	-0.503	-0.0703	Yes
144	Itgb2	18598	-0.522	-0.0630	Yes
145	Ccl5	18965	-0.590	-0.0668	Yes
146	Tlr1	19125	-0.624	-0.0592	Yes
147	Hdac9	19162	-0.633	-0.0450	Yes
148	Pf4	19394	-0.716	-0.0388	Yes
149	H2-DMa	19432	-0.738	-0.0220	Yes
150	Irf8	19485	-0.762	-0.0055	Yes
151	Cd96	19537	-0.793	0.0119	Yes