Details for gene set HALLMARK_TNFA_SIGNALING_VIA

Table: GSEA Results Summary

Dataset	CMP.CMP_Pheno.cls#Group1_versus_Group4.CMP_Pheno.cls#Group1_versus_Group4_repos
Phenotype	CMP_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	0
GeneSet	HALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)	0.18815294
Normalized Enrichment Score (NES)	0.80003166
Nominal p-value	0.87184465
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Trib1	8	1.168	0.0279	Yes
2	Gfpt2	18	1.063	0.0532	Yes
3	Dusp4	48	0.903	0.0736	Yes
4	Ier2	53	0.888	0.0949	Yes
5	Olr1	180	0.714	0.1058	Yes
6	Trip10	556	0.565	0.1004	Yes
7	Yrdc	580	0.561	0.1128	Yes
8	Id2	778	0.521	0.1153	Yes
9	Zbtb10	937	0.495	0.1193	Yes
10	Ccnd1	946	0.494	0.1308	Yes
11	Jun	1049	0.479	0.1372	Yes
12	Dusp1	1229	0.453	0.1391	Yes
13	Map2k3	1641	0.408	0.1280	Yes
14	Ppp1r15a	1937	0.379	0.1221	Yes
15	Plek	1958	0.377	0.1302	Yes
16	Plpp3	2044	0.371	0.1349	Yes
17	Ehd1	2226	0.358	0.1343	Yes
18	Ets2	2280	0.353	0.1402	Yes
19	Cxcl10	2495	0.336	0.1374	Yes
20	Tnc	2534	0.332	0.1435	Yes
21	Birc2	2560	0.331	0.1502	Yes
22	Ldlr	2685	0.322	0.1517	Yes
23	Lamb3	2764	0.318	0.1554	Yes
24	Tnip1	2788	0.316	0.1619	Yes
25	Fos	2959	0.306	0.1607	Yes
26	Klf10	3075	0.298	0.1620	Yes
27	Il18	3132	0.293	0.1663	Yes
28	Btg1	3153	0.292	0.1723	Yes
29	Il6	3188	0.290	0.1776	Yes
30	Gpr183	3204	0.289	0.1838	Yes
31	Klf6	3285	0.285	0.1866	Yes
32	Ptgs2	3569	0.265	0.1786	Yes
33	Tap1	3668	0.259	0.1799	Yes
34	B4galt5	3814	0.252	0.1786	Yes
35	Maff	3816	0.252	0.1846	Yes
36	Fosl2	3917	0.244	0.1854	Yes
37	Fosb	3979	0.240	0.1882	Yes
38	Gem	4381	0.220	0.1730	No
39	Pde4b	4445	0.217	0.1751	No
40	Tnfrsf9	4533	0.212	0.1758	No
41	Tnfaip6	4535	0.212	0.1808	No
42	Plaur	4579	0.209	0.1837	No
43	Ier5	4733	0.201	0.1808	No
44	Rel	4858	0.194	0.1792	No
45	Traf1	4943	0.190	0.1795	No
46	Pdlim5	5016	0.185	0.1803	No
47	Cd80	5035	0.184	0.1838	No
48	Cdkn1a	5106	0.180	0.1846	No
49	Phlda2	5157	0.178	0.1864	No
50	Fosl1	5293	0.174	0.1837	No
51	Ifit2	5300	0.173	0.1876	No
52	Sgk1	5474	0.166	0.1828	No
53	Slc2a3	5493	0.165	0.1859	No
54	Tnfaip2	5537	0.164	0.1877	No
55	Csf1	6022	0.141	0.1664	No
56	Dnajb4	6213	0.132	0.1599	No
57	Egr2	6463	0.120	0.1501	No
58	Phlda1	6530	0.118	0.1496	No
59	Nr4a1	6616	0.114	0.1480	No
60	Plau	6617	0.114	0.1508	No
61	Nr4a2	6757	0.113	0.1464	No
62	Nfe2l2	6762	0.112	0.1489	No
63	Il6st	6897	0.107	0.1447	No
64	Kdm6b	6913	0.106	0.1465	No
65	Cebpd	7026	0.101	0.1432	No
66	Nampt	7322	0.089	0.1303	No
67	Tubb2a	7492	0.082	0.1236	No
68	Mcl1	7517	0.081	0.1244	No
69	Slc2a6	7549	0.079	0.1247	No
70	Klf4	7685	0.073	0.1196	No
71	F2rl1	7840	0.067	0.1134	No
72	Atp2b1	8120	0.055	0.1004	No
73	Hbegf	8618	0.035	0.0759	No
74	Irs2	8628	0.035	0.0763	No
75	Il7r	8728	0.031	0.0720	No
76	Map3k8	8838	0.027	0.0671	No
77	Ccnl1	8847	0.026	0.0673	No
78	Bcl6	8893	0.025	0.0656	No
79	Pnrc1	9098	0.017	0.0556	No
80	Smad3	9152	0.014	0.0533	No
81	Il1b	9217	0.011	0.0503	No
82	Kynu	9451	0.003	0.0384	No
83	Marcks	9487	0.001	0.0367	No
84	Rigi	9671	-0.002	0.0274	No
85	Tiparp	9672	-0.002	0.0274	No
86	Btg3	9679	-0.002	0.0272	No
87	Vegfa	9830	-0.009	0.0197	No
88	Tnfaip3	10050	-0.016	0.0089	No
89	Irf1	10060	-0.016	0.0089	No
90	Rhob	10070	-0.017	0.0088	No
91	Nfkbia	10153	-0.020	0.0051	No
92	Nfkb2	10483	-0.033	-0.0109	No
93	Cflar	10550	-0.036	-0.0134	No
94	Pfkfb3	10555	-0.036	-0.0127	No
95	Nfkbie	10663	-0.040	-0.0172	No
96	Panx1	10783	-0.045	-0.0221	No
97	Bcl3	10792	-0.045	-0.0215	No
98	Egr1	10940	-0.051	-0.0277	No
99	Mxd1	11443	-0.073	-0.0516	No
100	Ccl5	11496	-0.075	-0.0524	No
101	Hes1	11534	-0.077	-0.0524	No
102	Cd44	11591	-0.080	-0.0533	No
103	Nfil3	11681	-0.083	-0.0559	No
104	Sqstm1	11773	-0.086	-0.0584	No
105	Nfkb1	11823	-0.089	-0.0588	No
106	Dennd5a	11996	-0.096	-0.0652	No
107	Rcan1	12093	-0.100	-0.0677	No
108	Stat5a	12161	-0.103	-0.0686	No
109	Serpinb2	12216	-0.106	-0.0688	No
110	Slc16a6	12362	-0.112	-0.0735	No
111	Rela	12529	-0.121	-0.0790	No
112	Tank	12548	-0.121	-0.0770	No
113	B4galt1	12598	-0.123	-0.0765	No
114	Rnf19b	12813	-0.128	-0.0844	No
115	Tnfaip8	12936	-0.135	-0.0873	No
116	Cd69	12962	-0.136	-0.0853	No
117	Myc	13024	-0.139	-0.0850	No
118	Per1	13049	-0.140	-0.0829	No
119	Ptpre	13062	-0.140	-0.0801	No
120	Serpinb8	13068	-0.140	-0.0770	No
121	Tnip2	13122	-0.143	-0.0762	No
122	Spsb1	13128	-0.143	-0.0730	No
123	Ripk2	13178	-0.145	-0.0720	No
124	Icam1	13290	-0.150	-0.0740	No
125	Junb	13395	-0.154	-0.0756	No
126	Tgif1	13402	-0.155	-0.0721	No
127	Plk2	13533	-0.161	-0.0748	No
128	G0s2	13609	-0.164	-0.0747	No
129	Birc3	14117	-0.183	-0.0961	No
130	Btg2	14157	-0.186	-0.0936	No
131	F3	14189	-0.187	-0.0907	No
132	Dram1	14504	-0.205	-0.1017	No
133	Clcf1	14534	-0.206	-0.0982	No
134	Zc3h12a	14547	-0.207	-0.0938	No
135	Ninj1	14912	-0.226	-0.1069	No
136	Jag1	14930	-0.226	-0.1023	No
137	Klf2	14997	-0.231	-0.1001	No
138	Nfat5	15019	-0.232	-0.0955	No
139	Ptger4	15031	-0.233	-0.0905	No
140	Sphk1	15103	-0.237	-0.0883	No
141	Tnf	15292	-0.244	-0.0920	No
142	Ifngr2	15404	-0.252	-0.0916	No
143	Fut4	15466	-0.256	-0.0885	No
144	Gadd45a	15593	-0.263	-0.0886	No
145	Sat1	15805	-0.272	-0.0927	No
146	Tsc22d1	15828	-0.273	-0.0872	No
147	Icosl	15986	-0.283	-0.0884	No
148	Bhlhe40	16086	-0.288	-0.0864	No
149	Zfp36	16184	-0.295	-0.0842	No
150	Pmepa1	16231	-0.298	-0.0794	No
151	Inhba	16289	-0.302	-0.0750	No
152	Sod2	16611	-0.324	-0.0835	No
153	Atf3	16702	-0.329	-0.0801	No
154	Socs3	17359	-0.375	-0.1045	No
155	Dusp2	17379	-0.377	-0.0964	No
156	Ccrl2	17481	-0.387	-0.0922	No
157	Dusp5	17557	-0.391	-0.0865	No
158	Lif	17566	-0.392	-0.0774	No
159	Il15ra	17721	-0.403	-0.0755	No
160	Cebpb	17761	-0.407	-0.0677	No
161	Ifih1	17920	-0.422	-0.0655	No
162	Litaf	17968	-0.426	-0.0576	No
163	Snn	17989	-0.428	-0.0482	No
164	Eif1	18012	-0.431	-0.0389	No
165	Gadd45b	18169	-0.447	-0.0360	No
166	Tlr2	18171	-0.447	-0.0253	No
167	Relb	18233	-0.454	-0.0174	No
168	Klf9	18250	-0.456	-0.0072	No
169	Fjx1	19042	-0.582	-0.0334	No
170	Tnfsf9	19067	-0.591	-0.0203	No
171	Gch1	19313	-0.655	-0.0170	No
172	Abca1	19526	-0.742	-0.0098	No
173	Ier3	19694	-0.919	0.0039	No