DatasetCMP.CMP_Pheno.cls#Group1_versus_Group4.CMP_Pheno.cls#Group1_versus_Group4_repos
PhenotypeCMP_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY
Enrichment Score (ES)-0.35795653
Normalized Enrichment Score (NES)-1.2905356
Nominal p-value0.18235295
FDR q-value0.44279906
FWER p-Value0.774
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Txnrd22700.6650.0560No
2Glrx28240.5120.0816No
3Ipcef120060.3740.0609No
4Pfkp44290.218-0.0390No
5Hhex55810.162-0.0805No
6G6pdx56730.157-0.0686No
7Hmox257350.153-0.0557No
8Stk2558030.150-0.0433No
9Pdlim169500.104-0.0905No
10Egln273040.089-0.0990No
11Gclm76230.076-0.1072No
12Scaf479190.063-0.1155No
13Abcc180890.056-0.1182No
14Prnp84110.043-0.1299No
15Msra84500.042-0.1275No
16Sbno291410.014-0.1610No
17Prdx694290.003-0.1752No
18Txnrd194300.003-0.1748No
19Prdx410013-0.015-0.2028No
20Mbp10211-0.022-0.2104No
21Ercc210222-0.023-0.2085No
22Gpx410238-0.024-0.2068No
23Ptpa10418-0.030-0.2127No
24Oxsr110595-0.038-0.2177No
25Gclc11244-0.064-0.2438No
26Gpx311273-0.065-0.2384No
27Fes11384-0.070-0.2366No
28Ndufs211678-0.083-0.2428No
29Cat12111-0.101-0.2542No
30Lsp112392-0.114-0.2565No
31Junb13395-0.154-0.2911No
32Cdkn2d13951-0.175-0.3009No
33Glrx15078-0.235-0.3333Yes
34Prdx115148-0.238-0.3119Yes
35Mpo15329-0.247-0.2951Yes
36Gsr15555-0.261-0.2792Yes
37Atox115697-0.268-0.2583Yes
38Prdx215870-0.276-0.2381Yes
39Selenos16209-0.296-0.2242Yes
40Srxn116277-0.301-0.1960Yes
41Sod116608-0.323-0.1789Yes
42Sod216611-0.324-0.1451Yes
43Lamtor517086-0.352-0.1322Yes
44Nqo117156-0.358-0.0982Yes
45Ndufa617737-0.405-0.0852Yes
46Txn118774-0.528-0.0824Yes
47Mgst119216-0.628-0.0389Yes
48Ftl119262-0.6400.0258Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY