DatasetCMP.CMP_Pheno.cls#Group1_versus_Group4.CMP_Pheno.cls#Group1_versus_Group4_repos
PhenotypeCMP_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class0
GeneSetHALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)0.33523455
Normalized Enrichment Score (NES)1.4857553
Nominal p-value0.14455445
FDR q-value0.1938191
FWER p-Value0.411
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_G2M_CHECKPOINT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Odc11210.7780.0133Yes
2Sqle2490.6760.0237Yes
3Hnrnpd2510.6760.0406Yes
4Racgap12650.6660.0566Yes
5Kpnb14260.6080.0636Yes
6Amd15550.5660.0712Yes
7Mcm26550.5450.0798Yes
8Hnrnpu6690.5430.0927Yes
9Numa17270.5300.1031Yes
10Upf17930.5170.1127Yes
11Hspa88090.5140.1248Yes
12Mcm59300.4970.1311Yes
13Ccnd19460.4940.1427Yes
14Incenp10650.4770.1486Yes
15Srsf111210.4680.1575Yes
16Sfpq11320.4670.1686Yes
17Uck211420.4650.1798Yes
18Chaf1a12210.4540.1872Yes
19Espl113360.4410.1924Yes
20Ewsr113410.4400.2032Yes
21Xpo113780.4350.2123Yes
22Tfdp114020.4330.2219Yes
23Pole14040.4330.2327Yes
24Lmnb115120.4220.2378Yes
25H2bc1217380.3980.2363Yes
26Rad2118220.3900.2418Yes
27Kif2c22340.3570.2297Yes
28Cks222420.3560.2383Yes
29Smc1a25580.3310.2305Yes
30Mcm627860.3160.2268Yes
31Lbr30450.3000.2211Yes
32G3bp132420.2870.2183Yes
33Ss1833670.2790.2189Yes
34Gspt133740.2790.2256Yes
35Atf534930.2690.2263Yes
36Tra2b35060.2680.2324Yes
37Notch236360.2600.2323Yes
38Kif1136800.2580.2366Yes
39Smarcc136950.2570.2423Yes
40Chek137650.2550.2452Yes
41Hif1a37750.2540.2511Yes
42Slc7a138620.2480.2529Yes
43Rad23b39600.2420.2540Yes
44Syncrip39660.2410.2597Yes
45Nolc139760.2410.2653Yes
46Abl139770.2410.2713Yes
47Cul340340.2390.2744Yes
48Mcm340380.2380.2802Yes
49Kif2342580.2260.2747Yes
50Tent4a42760.2260.2795Yes
51Nup9843150.2240.2832Yes
52Mapk1443390.2220.2875Yes
53Cul143440.2220.2929Yes
54Pola244300.2180.2940Yes
55Rbl144440.2170.2988Yes
56Pds5b46070.2080.2957Yes
57Meis246180.2070.3004Yes
58Ilf346800.2040.3024Yes
59Dtymk47150.2020.3057Yes
60Ncl48740.1930.3025Yes
61Dkc148870.1930.3067Yes
62Prc149220.1900.3097Yes
63Odf250630.1820.3071Yes
64Nup5050760.1820.3111Yes
65Orc652380.1770.3073Yes
66Suv39h152730.1750.3099Yes
67Ccnt152770.1740.3141Yes
68H2az153010.1730.3173Yes
69Pafah1b153340.1720.3199Yes
70Top2a53760.1700.3221Yes
71Aurka53840.1700.3260Yes
72Rasal254610.1670.3263Yes
73Mtf255350.1640.3266Yes
74Nsd256040.1600.3272Yes
75Tmpo57050.1550.3259Yes
76Cdc25a57270.1540.3287Yes
77Bub157980.1510.3289Yes
78Cdc4558800.1460.3284Yes
79Nasp58930.1460.3314Yes
80Exo159130.1450.3341Yes
81Srsf259620.1430.3352Yes
82Plk160510.1390.3342No
83Mki6761450.1350.3328No
84Slc7a562390.1320.3314No
85Cdc25b64460.1210.3239No
86Prim271830.0940.2887No
87Mybl272350.0920.2884No
88Cenpe72880.0900.2879No
89Wrn75110.0810.2786No
90Orc575610.0790.2781No
91Egf75700.0780.2796No
92E2f375930.0770.2805No
93Slc12a276470.0760.2796No
94Aurkb77510.0710.2761No
95Stmn178060.0680.2751No
96Dr178220.0670.2760No
97Dbf478370.0670.2770No
98Srsf1079560.0620.2725No
99Cul579760.0610.2730No
100Ube2s80500.0580.2707No
101Cul4a81450.0530.2673No
102Ddx39a82120.0510.2652No
103Ctcf83370.0460.2600No
104Cdc684880.0410.2533No
105Pbk85760.0370.2498No
106Map3k2086350.0350.2477No
107Atrx86540.0340.2476No
108Bard187200.0310.2451No
109Tnpo287650.0290.2436No
110Slc38a188700.0260.2389No
111Cenpf89260.0240.2367No
112Fbxo589500.0230.2361No
113Ccnb290650.0180.2307No
114Smad391520.0140.2267No
115Ccnf92750.0090.2207No
116Ythdc193610.0060.2165No
117Fancc93760.0050.2159No
118Kif1594060.0040.2145No
119Marcks94870.0010.2105No
120Foxn39959-0.0130.1867No
121Kif49964-0.0130.1869No
122Stag19972-0.0140.1868No
123Hus110086-0.0170.1815No
124Chmp1a10228-0.0230.1749No
125Arid4a10248-0.0240.1745No
126Ezh210284-0.0250.1733No
127Smc410336-0.0270.1714No
128Tle310514-0.0340.1632No
129Kif5b10529-0.0350.1634No
130Lig310589-0.0380.1613No
131Cdkn2c10600-0.0380.1617No
132Prpf4b10631-0.0390.1612No
133Hira10715-0.0420.1580No
134Rad54l10720-0.0420.1589No
135Nek210743-0.0430.1588No
136Bcl310792-0.0450.1575No
137Pml10935-0.0510.1515No
138Ccna210993-0.0540.1500No
139Top111068-0.0570.1476No
140Stil11073-0.0570.1488No
141Mad2l111173-0.0610.1453No
142Smc211242-0.0640.1434No
143Cdc711268-0.0650.1438No
144Casp8ap211333-0.0680.1422No
145Kif20b11340-0.0680.1436No
146Sap3011399-0.0710.1424No
147Ndc8011435-0.0720.1425No
148Ttk11498-0.0750.1412No
149Hmmr11613-0.0800.1374No
150E2f111628-0.0810.1387No
151Cdkn1b11654-0.0820.1394No
152Prmt511757-0.0850.1364No
153Plk412925-0.1340.0801No
154Cdk112998-0.1370.0799No
155Myc13024-0.1390.0821No
156Cdc2713084-0.1410.0826No
157Knl113138-0.1440.0835No
158Cks1b13329-0.1510.0775No
159Cbx113423-0.1550.0767No
160Kmt5a13526-0.1610.0755No
161Meis113542-0.1610.0788No
162Nusap113555-0.1620.0822No
163Rps6ka513631-0.1650.0825No
164Tpx213718-0.1690.0823No
165Katna113814-0.1720.0818No
166Polq13974-0.1760.0781No
167Jpt114007-0.1780.0809No
168Snrpd114066-0.1800.0824No
169Dmd14142-0.1850.0832No
170Tacc314303-0.1930.0799No
171Traip14661-0.2120.0669No
172Brca214842-0.2220.0633No
173Rpa214843-0.2220.0688No
174Mnat114908-0.2260.0712No
175H2ax15267-0.2430.0590No
176H2az215275-0.2430.0647No
177Kif2215382-0.2510.0656No
178E2f415399-0.2520.0711No
179Efna515621-0.2640.0664No
180Tgfb115794-0.2720.0644No
181Cenpa16080-0.2880.0571No
182Bub316227-0.2970.0571No
183Birc516721-0.3290.0401No
184Ube2c16820-0.3340.0435No
185Cdc2016875-0.3370.0491No
186E2f216925-0.3410.0552No
187Hmgb317006-0.3450.0597No
188Cdk417024-0.3470.0675No
189Gins217031-0.3470.0759No
190Hmga1b17996-0.4290.0374No
191Pura18103-0.4400.0430No
192Pttg118376-0.4730.0409No
193Cdkn318582-0.4990.0429No
194Troap19463-0.7090.0157No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_G2M_CHECKPOINT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_G2M_CHECKPOINT: Random ES distribution   
Gene set null distribution of ES for HALLMARK_G2M_CHECKPOINT