Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	CMP.CMP_Pheno.cls#Group1_versus_Group4.CMP_Pheno.cls#Group1_versus_Group4_repos
Phenotype	CMP_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.26881558
Normalized Enrichment Score (NES)	-1.2644188
Nominal p-value	0.1724138
FDR q-value	0.3412618
FWER p-Value	0.81

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Tarbp2	379	0.621	-0.0009	No
2	Taf1c	1021	0.484	-0.0193	No
3	Ak1	1380	0.435	-0.0246	No
4	Rala	1435	0.430	-0.0147	No
5	Srsf6	1452	0.429	-0.0028	No
6	Rad51	1454	0.429	0.0098	No
7	Gtf2h1	1624	0.409	0.0133	No
8	Umps	1730	0.399	0.0198	No
9	Zwint	1769	0.395	0.0295	No
10	Ercc5	1774	0.395	0.0410	No
11	Ddb1	1811	0.391	0.0508	No
12	Polr2k	2324	0.350	0.0350	No
13	Rnmt	2458	0.338	0.0383	No
14	Nme4	2652	0.325	0.0380	No
15	Pcna	2713	0.319	0.0444	No
16	Poll	3096	0.296	0.0337	No
17	Polh	3287	0.285	0.0324	No
18	Tk2	3330	0.282	0.0386	No
19	Nfx1	3347	0.280	0.0461	No
20	Supt5	3425	0.274	0.0503	No
21	Ada	3718	0.256	0.0430	No
22	Npr2	3788	0.254	0.0470	No
23	Polr1d	3939	0.243	0.0465	No
24	Adrm1	4031	0.239	0.0490	No
25	Gtf2f1	4076	0.236	0.0537	No
26	Usp11	4127	0.233	0.0580	No
27	Pola2	4430	0.218	0.0491	No
28	Pde4b	4445	0.217	0.0548	No
29	Tsg101	4504	0.214	0.0582	No
30	Vps37b	4601	0.208	0.0595	No
31	Smad5	4602	0.208	0.0656	No
32	Dgcr8	4638	0.207	0.0700	No
33	Sf3a3	4798	0.198	0.0677	No
34	Ak3	4885	0.193	0.0690	No
35	Nt5c3	4951	0.189	0.0713	No
36	Mpg	4994	0.187	0.0747	No
37	Pola1	5119	0.180	0.0737	No
38	Polr2a	5666	0.158	0.0506	No
39	Dguok	6314	0.128	0.0214	No
40	Sdcbp	7138	0.097	-0.0177	No
41	Zfp707	7143	0.097	-0.0150	No
42	Gmpr2	7196	0.094	-0.0149	No
43	Taf10	7277	0.090	-0.0163	No
44	Snapc4	7320	0.089	-0.0158	No
45	Polr2e	7385	0.086	-0.0165	No
46	Aaas	7428	0.084	-0.0162	No
47	Mrpl40	7447	0.083	-0.0147	No
48	Pold4	7507	0.081	-0.0153	No
49	Ercc3	7599	0.077	-0.0176	No
50	Rev3l	7752	0.071	-0.0233	No
51	Dut	7841	0.066	-0.0258	No
52	Hcls1	7872	0.065	-0.0254	No
53	Lig1	7916	0.063	-0.0257	No
54	Pole4	8004	0.059	-0.0284	No
55	Rfc5	8059	0.057	-0.0295	No
56	Rrm2b	8166	0.052	-0.0333	No
57	Taf12	8178	0.052	-0.0323	No
58	Pold1	8447	0.042	-0.0447	No
59	Ssrp1	8683	0.033	-0.0557	No
60	Gtf2b	8803	0.028	-0.0610	No
61	Fen1	9042	0.019	-0.0725	No
62	Ercc8	9290	0.009	-0.0849	No
63	Rfc4	9409	0.004	-0.0908	No
64	Pom121	9501	0.000	-0.0954	No
65	Pold3	9503	0.000	-0.0954	No
66	Xpc	9783	-0.006	-0.1095	No
67	Nt5c	10069	-0.017	-0.1235	No
68	Ercc2	10222	-0.023	-0.1305	No
69	Gpx4	10238	-0.024	-0.1306	No
70	Ddb2	10409	-0.030	-0.1384	No
71	Polr3c	10462	-0.032	-0.1401	No
72	Eloa	10685	-0.041	-0.1502	No
73	Nelfb	10700	-0.042	-0.1497	No
74	Guk1	10708	-0.042	-0.1488	No
75	Prim1	10787	-0.045	-0.1514	No
76	Supt4a	10884	-0.050	-0.1548	No
77	Nme3	10910	-0.050	-0.1546	No
78	Pde6g	11190	-0.062	-0.1670	No
79	Itpa	11323	-0.068	-0.1717	No
80	Ell	11475	-0.074	-0.1772	No
81	Nelfe	11541	-0.077	-0.1782	No
82	Ercc1	11556	-0.078	-0.1766	No
83	Bcap31	11603	-0.080	-0.1766	No
84	Rad52	11631	-0.081	-0.1756	No
85	Trp53	11669	-0.082	-0.1750	No
86	Stx3	11702	-0.084	-0.1742	No
87	Taf9	11889	-0.092	-0.1810	No
88	Cstf3	12036	-0.098	-0.1855	No
89	Nudt9	12203	-0.105	-0.1909	No
90	Ercc4	12911	-0.133	-0.2229	No
91	Polb	13070	-0.141	-0.2268	No
92	Polr2g	13236	-0.148	-0.2309	No
93	Adcy6	13287	-0.150	-0.2290	No
94	Gtf3c5	13374	-0.153	-0.2288	No
95	Rfc2	13464	-0.158	-0.2287	No
96	Polr2f	13471	-0.158	-0.2243	No
97	Gsdme	13638	-0.165	-0.2279	No
98	Ncbp2	13725	-0.169	-0.2273	No
99	Tyms	13801	-0.172	-0.2260	No
100	Nudt21	14131	-0.184	-0.2373	No
101	Rfc3	14180	-0.187	-0.2343	No
102	Polr1h	14315	-0.194	-0.2354	No
103	Nelfcd	14397	-0.198	-0.2336	No
104	Dctn4	14498	-0.204	-0.2327	No
105	Upf3b	14681	-0.213	-0.2356	No
106	Rpa2	14843	-0.222	-0.2373	No
107	Clp1	15013	-0.232	-0.2390	No
108	Rbx1	15016	-0.232	-0.2323	No
109	Alyref	15065	-0.234	-0.2278	No
110	Taf6	15350	-0.249	-0.2349	No
111	Rae1	15867	-0.275	-0.2530	No
112	Cox17	15942	-0.280	-0.2485	No
113	Gtf2h3	16102	-0.289	-0.2480	No
114	Gtf2h5	16511	-0.319	-0.2594	Yes
115	Ago4	16644	-0.325	-0.2565	Yes
116	Cant1	16727	-0.330	-0.2509	Yes
117	Nme1	16822	-0.334	-0.2458	Yes
118	Cmpk2	16969	-0.342	-0.2432	Yes
119	Sec61a1	17119	-0.355	-0.2402	Yes
120	Dad1	17296	-0.370	-0.2383	Yes
121	Polr1c	17500	-0.388	-0.2371	Yes
122	Gtf2a2	17653	-0.399	-0.2330	Yes
123	Polr2d	17723	-0.404	-0.2246	Yes
124	Impdh2	17788	-0.410	-0.2157	Yes
125	Polr2i	18040	-0.434	-0.2157	Yes
126	Eif1b	18079	-0.437	-0.2047	Yes
127	Polr3gl	18117	-0.442	-0.1935	Yes
128	Brf2	18151	-0.445	-0.1820	Yes
129	Cetn2	18304	-0.463	-0.1760	Yes
130	Sac3d1	18531	-0.491	-0.1730	Yes
131	Aprt	18756	-0.525	-0.1689	Yes
132	Polr2h	18815	-0.536	-0.1560	Yes
133	Polr2c	18868	-0.546	-0.1425	Yes
134	Snapc5	18870	-0.546	-0.1264	Yes
135	Rpa3	19011	-0.575	-0.1165	Yes
136	Polr2j	19065	-0.590	-0.1018	Yes
137	Vps28	19199	-0.623	-0.0901	Yes
138	Surf1	19231	-0.632	-0.0730	Yes
139	Mpc2	19242	-0.635	-0.0547	Yes
140	Edf1	19290	-0.648	-0.0379	Yes
141	Arl6ip1	19291	-0.649	-0.0188	Yes
142	Pnp	19319	-0.657	-0.0007	Yes
143	Taf13	19605	-0.800	0.0085	Yes