Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	CMP.CMP_Pheno.cls#Group1_versus_Group4.CMP_Pheno.cls#Group1_versus_Group4_repos
Phenotype	CMP_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	-0.30428198
Normalized Enrichment Score (NES)	-1.2873014
Nominal p-value	0.13
FDR q-value	0.33697507
FWER p-Value	0.776

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ccr5	173	0.718	0.0095	No
2	Il2ra	631	0.550	0.0002	No
3	Fas	650	0.547	0.0132	No
4	F2r	938	0.495	0.0112	No
5	Il7	1534	0.420	-0.0084	No
6	Bcat1	1575	0.414	0.0001	No
7	Mrpl3	1639	0.408	0.0073	No
8	Ube2n	1833	0.389	0.0074	No
9	Crtam	1984	0.375	0.0093	No
10	Zap70	2241	0.356	0.0053	No
11	Ache	2421	0.342	0.0049	No
12	Akt1	2443	0.339	0.0125	No
13	Mmp9	2618	0.325	0.0119	No
14	Trat1	2969	0.305	0.0019	No
15	Eif3j1	3039	0.301	0.0060	No
16	H2-Ob	3073	0.298	0.0120	No
17	Cd1d2	3114	0.295	0.0174	No
18	Itgal	3121	0.294	0.0246	No
19	Il18	3132	0.293	0.0316	No
20	Il6	3188	0.290	0.0362	No
21	Cd247	3419	0.275	0.0315	No
22	Abce1	3613	0.262	0.0283	No
23	Galnt1	3614	0.262	0.0350	No
24	Tap1	3668	0.259	0.0389	No
25	Itgb2	3712	0.256	0.0433	No
26	Hif1a	3775	0.254	0.0466	No
27	Map3k7	4268	0.226	0.0273	No
28	Eif3a	4323	0.223	0.0302	No
29	Flna	4352	0.221	0.0344	No
30	Brca1	4494	0.214	0.0327	No
31	H2-Oa	4511	0.213	0.0373	No
32	Cd79a	4616	0.207	0.0373	No
33	Nlrp3	4685	0.204	0.0391	No
34	Abi1	4731	0.202	0.0419	No
35	Cd80	5035	0.184	0.0312	No
36	Jak2	5043	0.184	0.0355	No
37	C2	5248	0.176	0.0296	No
38	Stab1	5292	0.174	0.0318	No
39	Ly75	5341	0.172	0.0337	No
40	Wars1	5446	0.167	0.0327	No
41	Irf4	5557	0.163	0.0312	No
42	Ccr1	5584	0.161	0.0340	No
43	Ets1	5812	0.150	0.0263	No
44	Csf1	6022	0.141	0.0192	No
45	Ccr2	6187	0.133	0.0143	No
46	Socs1	6209	0.132	0.0166	No
47	Egfr	6620	0.114	-0.0014	No
48	Tgfb2	6905	0.106	-0.0132	No
49	Tap2	7078	0.099	-0.0194	No
50	Fcgr2b	7249	0.092	-0.0258	No
51	Il12a	7323	0.089	-0.0272	No
52	H2-DMb2	7471	0.082	-0.0326	No
53	Traf2	7519	0.081	-0.0330	No
54	Tpd52	7535	0.080	-0.0317	No
55	Eif4g3	7782	0.069	-0.0425	No
56	Hcls1	7872	0.065	-0.0453	No
57	Il27ra	8045	0.058	-0.0526	No
58	Irf8	8071	0.057	-0.0525	No
59	Il10	8103	0.056	-0.0526	No
60	Capg	8328	0.047	-0.0629	No
61	Csk	8695	0.032	-0.0807	No
62	Socs5	9039	0.019	-0.0977	No
63	Ccnd2	9078	0.017	-0.0992	No
64	Gcnt1	9091	0.017	-0.0994	No
65	Il1b	9217	0.011	-0.1054	No
66	Hdac9	9658	-0.001	-0.1278	No
67	Il11	9768	-0.006	-0.1333	No
68	Ptprc	10539	-0.035	-0.1716	No
69	Tapbp	10574	-0.037	-0.1724	No
70	Bcl3	10792	-0.045	-0.1823	No
71	Ltb	10970	-0.053	-0.1900	No
72	Ifngr1	10986	-0.053	-0.1894	No
73	Cd47	11110	-0.058	-0.1941	No
74	Itk	11172	-0.061	-0.1957	No
75	Il15	11491	-0.075	-0.2100	No
76	Ccl5	11496	-0.075	-0.2083	No
77	Glmn	11593	-0.080	-0.2111	No
78	Fgr	11916	-0.093	-0.2252	No
79	Il4ra	11965	-0.095	-0.2252	No
80	Cdkn2a	12046	-0.098	-0.2268	No
81	Stat1	12073	-0.099	-0.2256	No
82	Prkcb	12237	-0.107	-0.2312	No
83	Ripk2	13178	-0.145	-0.2754	No
84	Il12rb1	13244	-0.148	-0.2749	No
85	Icam1	13290	-0.150	-0.2734	No
86	Map4k1	13355	-0.153	-0.2727	No
87	St8sia4	13381	-0.154	-0.2701	No
88	Lcp2	13387	-0.154	-0.2664	No
89	Acvr2a	13735	-0.169	-0.2798	No
90	Ikbkb	13746	-0.170	-0.2760	No
91	Il16	13802	-0.172	-0.2744	No
92	Nck1	14132	-0.184	-0.2865	No
93	Tlr3	14373	-0.197	-0.2937	No
94	Cd96	14423	-0.200	-0.2911	No
95	Rpl9	14496	-0.204	-0.2895	No
96	Lyn	14741	-0.217	-0.2964	No
97	Spi1	14896	-0.225	-0.2985	Yes
98	Tlr6	14916	-0.226	-0.2938	Yes
99	Bcl10	15014	-0.232	-0.2928	Yes
100	Ncf4	15017	-0.232	-0.2870	Yes
101	Lck	15093	-0.236	-0.2848	Yes
102	Apbb1	15125	-0.238	-0.2803	Yes
103	Npm1	15224	-0.242	-0.2791	Yes
104	Il2	15239	-0.242	-0.2737	Yes
105	Tnf	15292	-0.244	-0.2701	Yes
106	Ifngr2	15404	-0.252	-0.2693	Yes
107	Tlr1	15428	-0.254	-0.2640	Yes
108	Il18rap	15430	-0.254	-0.2576	Yes
109	Thy1	15433	-0.254	-0.2512	Yes
110	Mtif2	15462	-0.256	-0.2461	Yes
111	Stat4	15508	-0.258	-0.2418	Yes
112	Il2rg	15532	-0.259	-0.2364	Yes
113	Elf4	15717	-0.269	-0.2389	Yes
114	Tgfb1	15794	-0.272	-0.2359	Yes
115	Prkcg	15955	-0.281	-0.2368	Yes
116	Icosl	15986	-0.283	-0.2312	Yes
117	Degs1	16042	-0.286	-0.2267	Yes
118	Inhba	16289	-0.302	-0.2315	Yes
119	Eif3d	16454	-0.314	-0.2319	Yes
120	Ly86	16720	-0.329	-0.2370	Yes
121	Nme1	16822	-0.334	-0.2336	Yes
122	Cd86	17085	-0.352	-0.2380	Yes
123	Rps3a1	17164	-0.359	-0.2328	Yes
124	Igsf6	17276	-0.369	-0.2291	Yes
125	Ptpn6	17297	-0.370	-0.2206	Yes
126	Lif	17566	-0.392	-0.2243	Yes
127	Cd4	17645	-0.399	-0.2181	Yes
128	Was	17699	-0.402	-0.2106	Yes
129	Eif5a	17708	-0.403	-0.2007	Yes
130	Rpl3l	17715	-0.403	-0.1907	Yes
131	H2-DMa	17732	-0.405	-0.1812	Yes
132	Cd74	17735	-0.405	-0.1710	Yes
133	Cfp	17750	-0.406	-0.1614	Yes
134	Rps9	17880	-0.417	-0.1573	Yes
135	Cd28	17995	-0.429	-0.1522	Yes
136	Psmb10	18094	-0.439	-0.1460	Yes
137	Tlr2	18171	-0.447	-0.1385	Yes
138	Srgn	18183	-0.448	-0.1276	Yes
139	H2-Aa	18391	-0.475	-0.1261	Yes
140	Ube2d1	18400	-0.475	-0.1143	Yes
141	Pf4	18532	-0.492	-0.1085	Yes
142	Ifnar2	18538	-0.493	-0.0962	Yes
143	Cxcl9	18598	-0.501	-0.0864	Yes
144	Dyrk3	18725	-0.522	-0.0795	Yes
145	Gpr65	18926	-0.558	-0.0755	Yes
146	Irf7	19212	-0.627	-0.0740	Yes
147	B2m	19344	-0.663	-0.0638	Yes
148	Elane	19488	-0.721	-0.0527	Yes
149	Il4	19644	-0.844	-0.0391	Yes
150	Ccnd3	19648	-0.848	-0.0176	Yes
151	Ctss	19700	-0.935	0.0036	Yes