DatasetCMP.CMP_Pheno.cls#Group1_versus_Group3.CMP_Pheno.cls#Group1_versus_Group3_repos
PhenotypeCMP_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class2
GeneSetHALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY
Enrichment Score (ES)-0.35980475
Normalized Enrichment Score (NES)-1.1796248
Nominal p-value0.28973842
FDR q-value0.9158409
FWER p-Value0.931
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Gpx43410.5780.0392No
2Srxn18080.4670.0613No
3Hmox221820.3170.0227No
4G6pdx23460.3060.0444No
5Glrx224940.2960.0659No
6Abcc155270.136-0.0745No
7Msra55700.134-0.0635No
8Scaf456450.132-0.0543No
9Lsp164300.104-0.0839No
10Txnrd271450.078-0.1125No
11Ercc275310.062-0.1259No
12Prnp79370.049-0.1416No
13Sbno279650.048-0.1382No
14Glrx82750.037-0.1503No
15Cdkn2d84790.030-0.1576No
16Prdx685750.026-0.1599No
17Oxsr185950.026-0.1584No
18Mpo9641-0.010-0.2104No
19Txnrd110021-0.025-0.2271No
20Ipcef110659-0.048-0.2547No
21Pfkp11210-0.065-0.2763No
22Gsr11244-0.066-0.2715No
23Gclm11278-0.068-0.2665No
24Prdx112136-0.103-0.2998No
25Mbp12153-0.104-0.2905No
26Junb12171-0.105-0.2811No
27Ndufa612224-0.107-0.2732No
28Stk2512474-0.117-0.2744No
29Cat12996-0.138-0.2873No
30Gclc13280-0.148-0.2872No
31Fes13371-0.152-0.2768No
32Ptpa13786-0.171-0.2811No
33Mgst114459-0.205-0.2952No
34Pdlim115735-0.266-0.3338Yes
35Prdx215818-0.272-0.3113Yes
36Hhex15861-0.276-0.2865Yes
37Gpx316352-0.307-0.2813Yes
38Lamtor516361-0.307-0.2517Yes
39Egln216385-0.309-0.2226Yes
40Sod216735-0.332-0.2078Yes
41Sod117014-0.352-0.1874Yes
42Selenos17827-0.419-0.1876Yes
43Txn117917-0.428-0.1502Yes
44Ftl117966-0.431-0.1104Yes
45Atox118265-0.462-0.0804Yes
46Ndufs218467-0.485-0.0431Yes
47Nqo118484-0.4880.0038Yes
48Prdx419228-0.6280.0275Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY