Details for gene set HALLMARK_P53

Table: GSEA Results Summary

Dataset	CMP.CMP_Pheno.cls#Group1_versus_Group3.CMP_Pheno.cls#Group1_versus_Group3_repos
Phenotype	CMP_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	0
GeneSet	HALLMARK_P53_PATHWAY
Enrichment Score (ES)	0.15906218
Normalized Enrichment Score (NES)	0.70696884
Nominal p-value	0.9489796
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	H2ac25	1	1.569	0.0378	Yes
2	Slc7a11	128	0.713	0.0485	Yes
3	St14	391	0.560	0.0486	Yes
4	Rxra	473	0.535	0.0574	Yes
5	Btg1	509	0.525	0.0683	Yes
6	Rhbdf2	866	0.459	0.0612	Yes
7	Ppp1r15a	877	0.457	0.0717	Yes
8	Zfp365	992	0.437	0.0764	Yes
9	Hexim1	996	0.437	0.0868	Yes
10	Polh	1374	0.387	0.0769	Yes
11	Fos	1492	0.373	0.0799	Yes
12	Foxo3	1681	0.357	0.0789	Yes
13	Tgfa	1716	0.354	0.0857	Yes
14	Socs1	1749	0.350	0.0925	Yes
15	Trafd1	1813	0.345	0.0976	Yes
16	Cgrrf1	1924	0.336	0.1001	Yes
17	Abcc5	1993	0.330	0.1046	Yes
18	Aen	2028	0.328	0.1108	Yes
19	Cdkn2aip	2094	0.323	0.1152	Yes
20	Tap1	2130	0.321	0.1212	Yes
21	Txnip	2260	0.312	0.1221	Yes
22	Sdc1	2294	0.309	0.1279	Yes
23	Nudt15	2445	0.299	0.1274	Yes
24	Fas	2636	0.288	0.1247	Yes
25	Jun	2674	0.284	0.1296	Yes
26	Hmox1	2676	0.284	0.1364	Yes
27	Stom	2760	0.278	0.1389	Yes
28	Sp1	2940	0.267	0.1362	Yes
29	Ccng1	2979	0.264	0.1406	Yes
30	Rab40c	3108	0.256	0.1402	Yes
31	Baiap2	3175	0.253	0.1429	Yes
32	Slc3a2	3235	0.248	0.1459	Yes
33	Ip6k2	3330	0.242	0.1469	Yes
34	Mdm2	3352	0.240	0.1517	Yes
35	Hbegf	3417	0.238	0.1541	Yes
36	Slc19a2	3433	0.237	0.1591	Yes
37	Epha2	3545	0.231	0.1590	No
38	Ctsf	3705	0.222	0.1562	No
39	Rad51c	3874	0.213	0.1528	No
40	Elp1	4231	0.196	0.1393	No
41	Ccnk	4253	0.196	0.1430	No
42	Ptpn14	4255	0.196	0.1476	No
43	F2r	4486	0.183	0.1403	No
44	Pom121	4783	0.171	0.1293	No
45	Abat	4979	0.161	0.1233	No
46	Cdkn2a	5106	0.156	0.1206	No
47	H2aj	5241	0.149	0.1173	No
48	Wrap73	5401	0.141	0.1126	No
49	Tax1bp3	5406	0.141	0.1158	No
50	Cyfip2	5521	0.136	0.1133	No
51	Fdxr	5540	0.136	0.1156	No
52	Kif13b	5591	0.134	0.1163	No
53	Traf4	5999	0.119	0.0984	No
54	Ada	6210	0.113	0.0904	No
55	Ankra2	6235	0.112	0.0919	No
56	Tob1	6305	0.110	0.0910	No
57	Ier5	6466	0.102	0.0853	No
58	Rnf19b	6468	0.102	0.0877	No
59	Fgf13	6736	0.092	0.0763	No
60	Pvt1	6789	0.090	0.0758	No
61	Klk8	6805	0.090	0.0772	No
62	Hspa4l	6851	0.088	0.0771	No
63	Klf4	6955	0.085	0.0738	No
64	Vwa5a	7066	0.080	0.0702	No
65	Pcna	7218	0.075	0.0643	No
66	Ccp110	7291	0.072	0.0623	No
67	Rap2b	7299	0.072	0.0637	No
68	Ninj1	7538	0.062	0.0530	No
69	Plk2	7539	0.062	0.0545	No
70	Sphk1	7578	0.061	0.0540	No
71	Pdgfa	7832	0.052	0.0424	No
72	Steap3	7887	0.051	0.0409	No
73	Alox8	8039	0.045	0.0342	No
74	Slc35d1	8101	0.043	0.0322	No
75	Vdr	8114	0.043	0.0326	No
76	Casp1	8209	0.039	0.0287	No
77	Def6	8210	0.039	0.0297	No
78	Ercc5	8226	0.039	0.0298	No
79	Rrp8	8308	0.036	0.0266	No
80	Acvr1b	8501	0.029	0.0175	No
81	Zmat3	8514	0.029	0.0175	No
82	Wwp1	8732	0.020	0.0070	No
83	Fbxw7	8752	0.020	0.0065	No
84	Pmm1	8774	0.019	0.0059	No
85	Irag2	8777	0.019	0.0062	No
86	Mapkapk3	8875	0.015	0.0016	No
87	Hdac3	8899	0.014	0.0008	No
88	Tnfsf9	9078	0.008	-0.0081	No
89	Lif	9292	0.000	-0.0190	No
90	Apaf1	9629	-0.010	-0.0359	No
91	Sertad3	9787	-0.017	-0.0435	No
92	Sat1	9948	-0.022	-0.0512	No
93	Hint1	10116	-0.028	-0.0590	No
94	Abhd4	10223	-0.032	-0.0637	No
95	Dgka	10263	-0.034	-0.0648	No
96	Jag2	10354	-0.037	-0.0685	No
97	Trib3	10358	-0.038	-0.0678	No
98	Triap1	10437	-0.040	-0.0708	No
99	Eps8l2	10576	-0.045	-0.0767	No
100	Coq8a	10597	-0.046	-0.0766	No
101	Fam162a	10748	-0.051	-0.0831	No
102	Notch1	10798	-0.053	-0.0843	No
103	Mknk2	10807	-0.053	-0.0834	No
104	Cdk5r1	10868	-0.055	-0.0852	No
105	Perp	11000	-0.059	-0.0904	No
106	Atf3	11014	-0.060	-0.0896	No
107	Rb1	11131	-0.062	-0.0941	No
108	Rad9a	11132	-0.062	-0.0926	No
109	S100a4	11173	-0.064	-0.0931	No
110	Zbtb16	11209	-0.065	-0.0933	No
111	H1f2	11350	-0.071	-0.0987	No
112	Trp53	11445	-0.075	-0.1017	No
113	Zfp36l1	11784	-0.088	-0.1169	No
114	Nupr1	11813	-0.089	-0.1162	No
115	Upp1	11909	-0.094	-0.1188	No
116	Csrnp2	12013	-0.099	-0.1216	No
117	Btg2	12017	-0.099	-0.1194	No
118	Sesn1	12074	-0.101	-0.1198	No
119	Cdkn1a	12166	-0.105	-0.1220	No
120	Tchh	12461	-0.117	-0.1341	No
121	Ppm1d	12549	-0.120	-0.1357	No
122	Dcxr	12628	-0.123	-0.1367	No
123	Sec61a1	12759	-0.128	-0.1403	No
124	Nol8	12822	-0.131	-0.1403	No
125	Ccnd2	12905	-0.134	-0.1412	No
126	Blcap	12964	-0.137	-0.1409	No
127	App	12973	-0.137	-0.1380	No
128	Mxd4	13194	-0.145	-0.1457	No
129	Cd82	13417	-0.154	-0.1534	No
130	Bax	13473	-0.157	-0.1524	No
131	Pidd1	13475	-0.157	-0.1487	No
132	Plxnb2	13542	-0.159	-0.1482	No
133	Rrad	13625	-0.163	-0.1484	No
134	Tsc22d1	13720	-0.167	-0.1492	No
135	Ptpre	13726	-0.168	-0.1454	No
136	Ddit4	13776	-0.170	-0.1438	No
137	Dnttip2	13822	-0.172	-0.1420	No
138	Tm7sf3	13845	-0.173	-0.1389	No
139	Bak1	13983	-0.180	-0.1416	No
140	Prmt2	13999	-0.181	-0.1380	No
141	Xpc	14016	-0.182	-0.1344	No
142	Cebpa	14073	-0.184	-0.1328	No
143	Ndrg1	14167	-0.188	-0.1330	No
144	Plk3	14192	-0.190	-0.1297	No
145	Mxd1	14266	-0.194	-0.1287	No
146	Tpd52l1	14342	-0.198	-0.1278	No
147	Iscu	14475	-0.206	-0.1296	No
148	Ephx1	14582	-0.210	-0.1299	No
149	Ctsd	14754	-0.219	-0.1334	No
150	Osgin1	14771	-0.219	-0.1289	No
151	Ifi30	15087	-0.235	-0.1393	No
152	Pitpnc1	15372	-0.247	-0.1479	No
153	Ddb2	15393	-0.248	-0.1429	No
154	Hras	15564	-0.258	-0.1453	No
155	Ak1	15822	-0.273	-0.1519	No
156	Rps12	15941	-0.281	-0.1511	No
157	Cd81	15974	-0.284	-0.1459	No
158	Rpl18	16057	-0.289	-0.1431	No
159	Ei24	16170	-0.296	-0.1417	No
160	Gls2	16181	-0.296	-0.1351	No
161	Tcn2	16364	-0.307	-0.1370	No
162	Sfn	16622	-0.325	-0.1423	No
163	Itgb4	16679	-0.329	-0.1372	No
164	Tgfb1	16909	-0.345	-0.1406	No
165	Trp63	17211	-0.366	-0.1471	No
166	Tspyl2	17215	-0.366	-0.1384	No
167	Prkab1	17311	-0.375	-0.1342	No
168	Fuca1	17404	-0.383	-0.1297	No
169	Procr	17621	-0.401	-0.1311	No
170	Dram1	17796	-0.417	-0.1299	No
171	Ralgds	17875	-0.425	-0.1236	No
172	Ier3	17884	-0.426	-0.1138	No
173	Ccnd3	17954	-0.431	-0.1069	No
174	Irak1	18042	-0.441	-0.1007	No
175	Tprkb	18131	-0.447	-0.0944	No
176	Rps27l	18161	-0.451	-0.0850	No
177	Retsat	18410	-0.477	-0.0862	No
178	Ldhb	18489	-0.488	-0.0784	No
179	Rpl36	18526	-0.495	-0.0683	No
180	Vamp8	18533	-0.497	-0.0566	No
181	Cdh13	18653	-0.514	-0.0503	No
182	Rchy1	18811	-0.540	-0.0453	No
183	Phlda3	18928	-0.559	-0.0378	No
184	Rack1	19062	-0.587	-0.0304	No
185	S100a10	19089	-0.593	-0.0175	No
186	Ddit3	19255	-0.636	-0.0105	No
187	Gadd45a	19302	-0.655	0.0029	No
188	Gm2a	19656	-0.871	0.0059	No