DatasetCMP.CMP_Pheno.cls#Group1_versus_Group3.CMP_Pheno.cls#Group1_versus_Group3_repos
PhenotypeCMP_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class0
GeneSetHALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)0.3342577
Normalized Enrichment Score (NES)1.2788484
Nominal p-value0.27642277
FDR q-value0.86097926
FWER p-Value0.809
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_G2M_CHECKPOINT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Odc12270.6330.0075Yes
2Hnrnpd3340.5800.0196Yes
3Kpnb14280.5470.0314Yes
4Racgap16940.4870.0325Yes
5Numa18370.4630.0392Yes
6Hnrnpu9940.4370.0445Yes
7Chaf1a10740.4260.0533Yes
8Incenp10920.4230.0652Yes
9Lmnb112230.4060.0708Yes
10Srsf114470.3770.0708Yes
11Ilf314840.3740.0802Yes
12Xpo116460.3590.0829Yes
13Mcm220400.3270.0727Yes
14Upf120470.3270.0822Yes
15Sfpq20490.3260.0920Yes
16Hspa820610.3260.1013Yes
17Mybl220960.3230.1093Yes
18Tfdp121520.3190.1161Yes
19Abl121900.3170.1238Yes
20Espl122740.3100.1289Yes
21Lbr22780.3100.1381Yes
22Smc1a23660.3050.1429Yes
23Nolc123900.3030.1508Yes
24Bub124180.3020.1586Yes
25Atf526950.2820.1530Yes
26Tnpo229980.2630.1455Yes
27Ncl30960.2570.1483Yes
28Amd131120.2560.1552Yes
29Ss1831670.2530.1601Yes
30E2f331760.2520.1673Yes
31Rad2132310.2480.1720Yes
32Pole32720.2460.1774Yes
33Uck232890.2440.1840Yes
34Ndc8033280.2420.1893Yes
35Syncrip34100.2380.1924Yes
36Dbf434670.2350.1966Yes
37Pbk36360.2250.1948Yes
38Smarcc136380.2250.2016Yes
39Tpx237970.2180.2001Yes
40Kif1139150.2110.2005Yes
41Notch239180.2110.2068Yes
42G3bp139940.2070.2092Yes
43Cks240300.2050.2136Yes
44Nsd240960.2030.2164Yes
45Cul141140.2020.2216Yes
46Nasp41350.2010.2267Yes
47Kif441680.1990.2310Yes
48Mcm342110.1970.2348Yes
49E2f443600.1900.2330Yes
50Mcm644690.1840.2331Yes
51Top2a44920.1830.2375Yes
52Rad23b46040.1780.2372Yes
53Rbl146070.1780.2424Yes
54Gspt147040.1750.2428Yes
55Tra2b47100.1740.2478Yes
56Dtymk47520.1720.2509Yes
57Prc147900.1710.2542Yes
58Cdc25b48390.1680.2568Yes
59Mcm548530.1670.2612Yes
60Pola248680.1670.2655Yes
61Prmt549130.1650.2682Yes
62Cdc4549430.1630.2717Yes
63Ewsr149860.1610.2744Yes
64Dr151150.1560.2725Yes
65Nup5051170.1550.2772Yes
66Pafah1b151740.1530.2789Yes
67Mki6752580.1490.2792Yes
68Fbxo552720.1480.2830Yes
69Ccnt153440.1440.2837Yes
70Ythdc153730.1430.2866Yes
71Smad354070.1410.2892Yes
72Cenpe54180.1400.2929Yes
73Cdkn1b55860.1340.2884Yes
74Odf256370.1320.2898Yes
75Dkc156400.1320.2937Yes
76Kif20b56620.1310.2966Yes
77Wrn57310.1280.2970Yes
78Lig357760.1270.2986Yes
79Slc38a157960.1260.3014Yes
80Cul4a58390.1250.3030Yes
81H2az158560.1240.3060Yes
82Aurkb59130.1220.3068Yes
83Casp8ap259520.1200.3085Yes
84Ctcf60030.1180.3095Yes
85Egf60700.1160.3096Yes
86Ttk62320.1120.3048Yes
87Mapk1462390.1120.3079Yes
88Mad2l162400.1120.3113Yes
89Suv39h162760.1110.3128Yes
90Cenpf63010.1100.3149Yes
91Hus163190.1090.3173Yes
92Ube2s63620.1070.3184Yes
93Pds5b64230.1040.3185Yes
94Cdc25a64290.1040.3214Yes
95Top164510.1030.3234Yes
96Slc7a164760.1020.3252Yes
97Kif1565220.1000.3260Yes
98Cul365500.0990.3276Yes
99Tle366350.0960.3262Yes
100H2bc1266670.0950.3275Yes
101Plk166700.0950.3303Yes
102Srsf1067060.0930.3313Yes
103Ezh267280.0930.3330Yes
104Kif2368030.0900.3320Yes
105Slc12a268120.0900.3343Yes
106Arid4a68760.0870.3337No
107Rasal269170.0860.3342No
108Prpf4b70240.0820.3313No
109Tmpo71430.0780.3276No
110Hmmr73000.0720.3218No
111Mtf273870.0680.3195No
112Stag174830.0640.3166No
113Bard178660.0510.2986No
114Plk479220.0500.2973No
115E2f181470.0420.2871No
116Exo182160.0390.2848No
117Srsf282290.0380.2854No
118Hif1a82340.0380.2863No
119Smc282440.0380.2870No
120Atrx83470.0350.2828No
121Kif5b83810.0330.2822No
122Rad54l85600.0270.2739No
123Kif2286230.0250.2715No
124Orc587630.0200.2649No
125Map3k2087860.0190.2644No
126Smc489120.0140.2584No
127Rpa289510.0120.2568No
128Ccna291080.0070.2491No
129Gins292490.0010.2420No
130Foxn392640.0010.2413No
131Cul59500-0.0050.2294No
132Hira9504-0.0050.2294No
133Orc69611-0.0090.2242No
134Kif2c10033-0.0250.2035No
135Tent4a10084-0.0270.2018No
136Nup9810153-0.0300.1992No
137Pml10156-0.0300.2000No
138Pttg110198-0.0310.1989No
139Cdc610373-0.0380.1911No
140Prim210389-0.0390.1915No
141Chek110510-0.0430.1867No
142Ccnf10632-0.0470.1819No
143Knl110763-0.0510.1768No
144E2f210963-0.0580.1684No
145Cdc2010973-0.0580.1697No
146Meis111289-0.0680.1557No
147Birc511308-0.0690.1569No
148Fancc11501-0.0770.1494No
149Slc7a511553-0.0790.1491No
150Cdc711555-0.0790.1515No
151Cks1b11823-0.0900.1405No
152Marcks11947-0.0960.1371No
153Ube2c11948-0.0960.1400No
154Tacc311972-0.0970.1418No
155Cdk112127-0.1030.1370No
156Bcl312168-0.1050.1381No
157Cdc2712213-0.1070.1391No
158Sqle12298-0.1100.1381No
159Jpt112479-0.1170.1325No
160Stil12571-0.1210.1315No
161Snrpd112580-0.1210.1347No
162Nek212597-0.1220.1376No
163Ccnb213085-0.1390.1169No
164Polq13098-0.1400.1205No
165Cdkn313276-0.1480.1160No
166Mnat113293-0.1490.1196No
167Nusap113338-0.1510.1220No
168Chmp1a13349-0.1520.1260No
169H2ax13383-0.1530.1289No
170Brca213601-0.1620.1228No
171Cbx113695-0.1670.1230No
172Hmga1b14075-0.1840.1092No
173Kmt5a14199-0.1910.1087No
174Aurka14234-0.1930.1128No
175Rps6ka514367-0.2000.1121No
176Pura14445-0.2040.1143No
177Meis214538-0.2080.1159No
178Cenpa14686-0.2160.1149No
179Troap14692-0.2160.1211No
180Myc14831-0.2230.1208No
181Katna114914-0.2270.1235No
182H2az214939-0.2290.1291No
183Traip15666-0.2620.1000No
184Stmn115780-0.2690.1023No
185Efna515824-0.2730.1083No
186Cdkn2c15899-0.2790.1130No
187Ddx39a16175-0.2960.1079No
188Sap3016490-0.3160.1013No
189Cdk416570-0.3210.1070No
190Bub316599-0.3240.1153No
191Tgfb116909-0.3450.1100No
192Ccnd117274-0.3720.1026No
193Hmgb317401-0.3830.1077No
194Dmd18045-0.4410.0882No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_G2M_CHECKPOINT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_G2M_CHECKPOINT: Random ES distribution   
Gene set null distribution of ES for HALLMARK_G2M_CHECKPOINT