Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	CMP.CMP_Pheno.cls#Group1_versus_Group3.CMP_Pheno.cls#Group1_versus_Group3_repos
Phenotype	CMP_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.22685587
Normalized Enrichment Score (NES)	-0.99027956
Nominal p-value	0.4624506
FDR q-value	0.8192197
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Gp1ba	42	0.872	0.0222	No
2	Ctsh	221	0.636	0.0309	No
3	C1qc	275	0.608	0.0452	No
4	Rabif	524	0.521	0.0471	No
5	Olr1	557	0.512	0.0598	No
6	Hspa1a	702	0.485	0.0660	No
7	Vcpip1	997	0.436	0.0632	No
8	Prdm4	1135	0.417	0.0679	No
9	Tfpi2	1256	0.401	0.0730	No
10	Ehd1	1411	0.382	0.0758	No
11	Il6	1933	0.335	0.0586	No
12	F5	2034	0.328	0.0626	No
13	Kynu	2050	0.326	0.0710	No
14	Fn1	2385	0.303	0.0624	No
15	Irf1	2401	0.302	0.0701	No
16	Timp2	2467	0.298	0.0751	No
17	F8	2646	0.287	0.0741	No
18	Clu	2657	0.285	0.0815	No
19	Pim1	2736	0.279	0.0854	No
20	Src	2931	0.267	0.0829	No
21	Itgam	2948	0.266	0.0895	No
22	Mmp14	2995	0.263	0.0946	No
23	Maff	3412	0.238	0.0800	No
24	Cd36	3581	0.229	0.0778	No
25	Prep	3685	0.223	0.0788	No
26	Xpnpep1	3815	0.216	0.0783	No
27	Pdp1	4328	0.192	0.0575	No
28	Lap3	4377	0.189	0.0604	No
29	Pik3cg	4430	0.186	0.0629	No
30	Plek	4700	0.175	0.0541	No
31	Jak2	4754	0.172	0.0562	No
32	Prss36	4795	0.170	0.0589	No
33	C1qa	4809	0.169	0.0630	No
34	Rnf4	4829	0.169	0.0667	No
35	Serpinc1	4997	0.160	0.0627	No
36	Lcp2	5009	0.160	0.0666	No
37	Kif2a	5166	0.153	0.0629	No
38	Gmfb	5253	0.149	0.0627	No
39	Hspa5	5289	0.147	0.0650	No
40	F7	5446	0.139	0.0610	No
41	Pla2g4a	5478	0.138	0.0632	No
42	Ppp2cb	5655	0.131	0.0579	No
43	Cp	5736	0.128	0.0574	No
44	Mmp8	5897	0.122	0.0527	No
45	Gnai3	5924	0.121	0.0548	No
46	Brpf3	5959	0.120	0.0564	No
47	Cd46	6271	0.111	0.0436	No
48	Raf1	6280	0.111	0.0463	No
49	Rbsn	6344	0.108	0.0461	No
50	Usp16	6513	0.100	0.0404	No
51	Usp8	6645	0.096	0.0364	No
52	Lrp1	6795	0.090	0.0313	No
53	Sirt6	6964	0.084	0.0251	No
54	Kcnip2	7008	0.083	0.0252	No
55	Zfpm2	7626	0.059	-0.0046	No
56	Akap10	7758	0.054	-0.0098	No
57	Grb2	8000	0.047	-0.0208	No
58	Cr2	8015	0.046	-0.0202	No
59	Pik3ca	8053	0.045	-0.0208	No
60	Casp3	8157	0.041	-0.0249	No
61	Ctsl	8166	0.041	-0.0242	No
62	Casp1	8209	0.039	-0.0252	No
63	Usp14	8345	0.035	-0.0312	No
64	Rce1	8529	0.028	-0.0397	No
65	C3	8944	0.012	-0.0605	No
66	Pik3r5	8966	0.011	-0.0612	No
67	Cpq	8969	0.011	-0.0610	No
68	Lamp2	9000	0.010	-0.0623	No
69	Col4a2	9031	0.009	-0.0635	No
70	Dgkh	9071	0.008	-0.0653	No
71	Gngt2	9073	0.008	-0.0651	No
72	Stx4a	9117	0.006	-0.0671	No
73	Ang	9123	0.006	-0.0672	No
74	Msrb1	9241	0.002	-0.0731	No
75	L3mbtl4	9595	-0.008	-0.0909	No
76	Dgkg	9834	-0.018	-0.1025	No
77	Dpp4	9876	-0.020	-0.1041	No
78	Pcsk9	9971	-0.023	-0.1082	No
79	Dock10	9974	-0.023	-0.1077	No
80	Gp9	10031	-0.025	-0.1098	No
81	Plscr1	10051	-0.026	-0.1101	No
82	Dock4	10157	-0.030	-0.1146	No
83	Notch4	10493	-0.043	-0.1305	No
84	Kcnip3	10780	-0.052	-0.1436	No
85	Cdk5r1	10868	-0.055	-0.1465	No
86	S100a13	10883	-0.056	-0.1457	No
87	Dusp6	10937	-0.058	-0.1468	No
88	Usp15	10945	-0.058	-0.1455	No
89	Irf7	11144	-0.063	-0.1538	No
90	Gca	11275	-0.068	-0.1586	No
91	C2	11322	-0.070	-0.1590	No
92	Lta4h	11533	-0.078	-0.1675	No
93	Spock2	11558	-0.079	-0.1665	No
94	Gnai2	11669	-0.083	-0.1698	No
95	Scg3	11680	-0.084	-0.1680	No
96	C9	11778	-0.088	-0.1705	No
97	Lipa	11916	-0.094	-0.1748	No
98	Gpd2	11922	-0.095	-0.1724	No
99	Ctsb	11949	-0.096	-0.1711	No
100	Psen1	12016	-0.099	-0.1717	No
101	Cblb	12174	-0.105	-0.1768	No
102	Prcp	12290	-0.110	-0.1796	No
103	Ctso	12303	-0.110	-0.1771	No
104	F10	12389	-0.115	-0.1782	No
105	Pclo	12534	-0.119	-0.1822	No
106	Irf2	12538	-0.119	-0.1791	No
107	Gzmk	12681	-0.125	-0.1828	No
108	Dock9	12693	-0.125	-0.1799	No
109	Zeb1	12730	-0.127	-0.1782	No
110	Rasgrp1	12740	-0.127	-0.1751	No
111	Gata3	12756	-0.128	-0.1722	No
112	Anxa5	12767	-0.129	-0.1692	No
113	Ppp4c	13021	-0.139	-0.1782	No
114	Lyn	13115	-0.141	-0.1790	No
115	Casp7	13217	-0.146	-0.1800	No
116	Serpinb2	13242	-0.147	-0.1772	No
117	Dyrk2	13948	-0.178	-0.2081	No
118	Pfn1	14059	-0.184	-0.2086	No
119	Plaur	14288	-0.195	-0.2148	No
120	Gnb2	14325	-0.197	-0.2111	No
121	Gng2	14634	-0.213	-0.2209	Yes
122	Adam9	14642	-0.213	-0.2153	Yes
123	Ctsd	14754	-0.219	-0.2148	Yes
124	Fyn	14820	-0.222	-0.2120	Yes
125	Cpm	14982	-0.231	-0.2137	Yes
126	S100a9	15145	-0.237	-0.2153	Yes
127	Ctsc	15174	-0.239	-0.2101	Yes
128	Casp9	15184	-0.239	-0.2039	Yes
129	Rhog	15534	-0.256	-0.2145	Yes
130	Pdgfb	15648	-0.261	-0.2130	Yes
131	Sh2b3	15674	-0.262	-0.2069	Yes
132	Actn2	15897	-0.279	-0.2105	Yes
133	Cebpb	15943	-0.281	-0.2049	Yes
134	Lck	16097	-0.291	-0.2046	Yes
135	Fdx1	16265	-0.301	-0.2047	Yes
136	Apoc1	16275	-0.302	-0.1967	Yes
137	Calm3	16377	-0.308	-0.1932	Yes
138	Cfb	16386	-0.309	-0.1850	Yes
139	Fcnb	16414	-0.311	-0.1777	Yes
140	Car2	16453	-0.313	-0.1709	Yes
141	Prkcd	17028	-0.353	-0.1903	Yes
142	Calm1	17068	-0.356	-0.1823	Yes
143	Csrp1	17133	-0.360	-0.1755	Yes
144	Lgals3	17142	-0.361	-0.1658	Yes
145	F3	17195	-0.365	-0.1583	Yes
146	Lgmn	17210	-0.366	-0.1487	Yes
147	Fcer1g	17495	-0.389	-0.1523	Yes
148	Mmp15	17531	-0.393	-0.1432	Yes
149	Ctss	17707	-0.409	-0.1407	Yes
150	Casp4	17818	-0.419	-0.1346	Yes
151	Ltf	17887	-0.426	-0.1261	Yes
152	Klkb1	18095	-0.444	-0.1243	Yes
153	Atox1	18265	-0.462	-0.1200	Yes
154	Was	18554	-0.501	-0.1207	Yes
155	Cdh13	18653	-0.514	-0.1113	Yes
156	Plg	18675	-0.516	-0.0980	Yes
157	Phex	18782	-0.536	-0.0884	Yes
158	Hnf4a	18931	-0.559	-0.0803	Yes
159	Psmb9	19212	-0.622	-0.0772	Yes
160	Gnb4	19252	-0.634	-0.0615	Yes
161	Ccl5	19331	-0.664	-0.0469	Yes
162	Dusp5	19349	-0.668	-0.0291	Yes
163	Tnfaip3	19425	-0.702	-0.0133	Yes
164	Me1	19738	-1.106	0.0017	Yes