Details for gene set HALLMARK_APICAL

Table: GSEA Results Summary

Dataset	CMP.CMP_Pheno.cls#Group1_versus_Group3.CMP_Pheno.cls#Group1_versus_Group3_repos
Phenotype	CMP_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_APICAL_JUNCTION
Enrichment Score (ES)	-0.28340352
Normalized Enrichment Score (NES)	-1.1980891
Nominal p-value	0.20039682
FDR q-value	1.0
FWER p-Value	0.915

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Mmp2	25	0.934	0.0226	No
2	Rhof	218	0.638	0.0292	No
3	Fbn1	466	0.536	0.0303	No
4	Nrap	552	0.514	0.0391	No
5	Itga9	770	0.473	0.0402	No
6	Fscn1	812	0.466	0.0500	No
7	Mdk	946	0.445	0.0546	No
8	Tsc1	1184	0.410	0.0530	No
9	Slit2	1275	0.400	0.0587	No
10	Map4k2	1599	0.363	0.0515	No
11	Itgb1	2053	0.326	0.0367	No
12	Icam4	2103	0.323	0.0425	No
13	Lamb3	2107	0.322	0.0506	No
14	Actn1	2405	0.302	0.0432	No
15	Tmem8b	2693	0.282	0.0358	No
16	Myh9	2733	0.279	0.0409	No
17	Inppl1	2741	0.279	0.0477	No
18	Cdh1	2811	0.274	0.0512	No
19	Src	2931	0.267	0.0520	No
20	Nf2	3038	0.261	0.0533	No
21	Baiap2	3175	0.253	0.0528	No
22	Mapk11	3221	0.249	0.0569	No
23	Gamt	3281	0.245	0.0601	No
24	Ctnna1	3393	0.239	0.0606	No
25	Dhx16	3405	0.238	0.0661	No
26	Shc1	3580	0.229	0.0631	No
27	Ikbkg	3592	0.228	0.0684	No
28	Gtf2f1	3674	0.224	0.0700	No
29	Cd276	3831	0.216	0.0676	No
30	Itga10	4029	0.206	0.0628	No
31	Lima1	4091	0.203	0.0649	No
32	Ctnnd1	4155	0.200	0.0668	No
33	Cntn1	4339	0.191	0.0623	No
34	Irs1	4340	0.191	0.0672	No
35	Parva	4622	0.178	0.0574	No
36	Wnk4	4651	0.177	0.0605	No
37	Arhgef6	4720	0.174	0.0615	No
38	Amh	5095	0.156	0.0465	No
39	Pik3cb	5129	0.155	0.0487	No
40	Msn	5227	0.150	0.0476	No
41	Ywhah	5333	0.145	0.0460	No
42	Tial1	5361	0.144	0.0483	No
43	B4galt1	5484	0.137	0.0456	No
44	Nectin3	5534	0.136	0.0466	No
45	Pten	5551	0.135	0.0492	No
46	Akt3	5558	0.135	0.0523	No
47	Sdc3	5592	0.134	0.0541	No
48	Vcl	5629	0.132	0.0556	No
49	Col17a1	5764	0.127	0.0521	No
50	Nectin1	5901	0.122	0.0483	No
51	Tgfbi	5936	0.121	0.0496	No
52	Mapk14	6239	0.112	0.0371	No
53	Nlgn3	6306	0.110	0.0365	No
54	Thbs3	6347	0.108	0.0373	No
55	Actg1	6610	0.097	0.0264	No
56	Insig1	6853	0.088	0.0163	No
57	Myh10	6858	0.088	0.0183	No
58	Epb41l2	6982	0.084	0.0142	No
59	Actn4	7119	0.079	0.0093	No
60	Nectin2	7181	0.077	0.0082	No
61	Pkd1	7204	0.076	0.0090	No
62	Ptk2	7762	0.054	-0.0180	No
63	Vcam1	7842	0.052	-0.0207	No
64	Nlgn2	7994	0.047	-0.0272	No
65	Alox8	8039	0.045	-0.0283	No
66	Mmp9	8079	0.044	-0.0292	No
67	Plcg1	8111	0.043	-0.0297	No
68	Rasa1	8183	0.040	-0.0322	No
69	Tubg1	8242	0.038	-0.0342	No
70	Shroom2	8269	0.038	-0.0346	No
71	Taok2	8359	0.034	-0.0383	No
72	Cap1	8682	0.022	-0.0541	No
73	Map3k20	8786	0.019	-0.0589	No
74	Itga2	8888	0.014	-0.0637	No
75	Cdh8	8934	0.013	-0.0656	No
76	Sympk	8987	0.011	-0.0680	No
77	Stx4a	9117	0.006	-0.0744	No
78	Wasl	9139	0.006	-0.0754	No
79	Syk	9169	0.005	-0.0767	No
80	Ptprc	9396	-0.002	-0.0882	No
81	Nf1	9816	-0.018	-0.1091	No
82	Exoc4	10209	-0.032	-0.1283	No
83	Nrxn2	10287	-0.035	-0.1313	No
84	Pecam1	10550	-0.044	-0.1436	No
85	Skap2	10732	-0.050	-0.1515	No
86	Akt2	10892	-0.056	-0.1582	No
87	Adra1b	10995	-0.059	-0.1619	No
88	Icam5	11007	-0.060	-0.1609	No
89	Cd274	11181	-0.064	-0.1681	No
90	Adam23	11231	-0.066	-0.1689	No
91	Dlg1	11436	-0.074	-0.1774	No
92	Vav2	11537	-0.078	-0.1805	No
93	Gnai2	11669	-0.083	-0.1850	No
94	Rsu1	11859	-0.091	-0.1923	No
95	Kcnh2	12040	-0.100	-0.1990	No
96	Cdk8	12157	-0.104	-0.2022	No
97	Rac2	12189	-0.106	-0.2011	No
98	Layn	12666	-0.125	-0.2222	No
99	Cd86	12725	-0.127	-0.2219	No
100	Ldlrap1	13130	-0.142	-0.2389	No
101	Jam3	13172	-0.144	-0.2373	No
102	Zyx	13321	-0.150	-0.2410	No
103	Actn3	13481	-0.157	-0.2451	No
104	Pals1	13569	-0.160	-0.2454	No
105	Atp1a3	13944	-0.178	-0.2599	No
106	Pfn1	14059	-0.184	-0.2610	No
107	Evl	14287	-0.195	-0.2676	No
108	Vasp	14416	-0.202	-0.2690	No
109	Cldn15	14486	-0.206	-0.2672	No
110	Adam15	14531	-0.208	-0.2641	No
111	Adam9	14642	-0.213	-0.2643	No
112	Arpc2	15018	-0.231	-0.2775	Yes
113	Cd34	15042	-0.232	-0.2727	Yes
114	Cx3cl1	15075	-0.234	-0.2683	Yes
115	Egfr	15111	-0.237	-0.2641	Yes
116	Nfasc	15114	-0.237	-0.2581	Yes
117	Sorbs3	15310	-0.244	-0.2618	Yes
118	Crat	15446	-0.252	-0.2623	Yes
119	Hras	15564	-0.258	-0.2616	Yes
120	Crb3	15591	-0.259	-0.2563	Yes
121	Tro	15623	-0.260	-0.2512	Yes
122	Cadm2	15661	-0.262	-0.2464	Yes
123	Pard6g	15702	-0.264	-0.2417	Yes
124	Mapk13	15728	-0.266	-0.2362	Yes
125	Cdh4	15761	-0.268	-0.2309	Yes
126	Tspan4	15767	-0.269	-0.2243	Yes
127	Actn2	15897	-0.279	-0.2238	Yes
128	Pik3r3	16044	-0.288	-0.2238	Yes
129	Negr1	16300	-0.303	-0.2291	Yes
130	Cldn14	16400	-0.310	-0.2262	Yes
131	Pbx2	16464	-0.314	-0.2214	Yes
132	Gnai1	16478	-0.315	-0.2140	Yes
133	Col16a1	16505	-0.317	-0.2072	Yes
134	Nexn	16577	-0.322	-0.2026	Yes
135	Vwf	16676	-0.328	-0.1992	Yes
136	Itgb4	16679	-0.329	-0.1908	Yes
137	Icam1	16779	-0.335	-0.1873	Yes
138	Cercam	16788	-0.336	-0.1791	Yes
139	Sgce	16820	-0.339	-0.1720	Yes
140	Cadm3	16905	-0.345	-0.1675	Yes
141	Sirpa	17032	-0.354	-0.1649	Yes
142	Lama3	17036	-0.354	-0.1560	Yes
143	Amigo1	17080	-0.357	-0.1490	Yes
144	Cnn2	17232	-0.367	-0.1473	Yes
145	Vcan	17322	-0.376	-0.1422	Yes
146	Adamts5	17363	-0.380	-0.1346	Yes
147	Bmp1	17557	-0.395	-0.1343	Yes
148	Thy1	17651	-0.404	-0.1287	Yes
149	Cdh11	17663	-0.405	-0.1189	Yes
150	Hadh	17771	-0.415	-0.1137	Yes
151	Nectin4	17883	-0.426	-0.1085	Yes
152	Rras	18123	-0.446	-0.1092	Yes
153	Actb	18332	-0.469	-0.1078	Yes
154	Myl12b	18611	-0.508	-0.1090	Yes
155	Tjp1	18613	-0.508	-0.0961	Yes
156	Speg	18855	-0.548	-0.0943	Yes
157	Mvd	18875	-0.551	-0.0812	Yes
158	Icam2	18980	-0.569	-0.0719	Yes
159	Jup	19172	-0.611	-0.0660	Yes
160	Traf1	19217	-0.622	-0.0523	Yes
161	Amigo2	19347	-0.667	-0.0418	Yes
162	Mpzl1	19501	-0.734	-0.0308	Yes
163	Itga3	19544	-0.764	-0.0134	Yes
164	Nrtn	19704	-0.974	0.0034	Yes