Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	CMP.CMP_Pheno.cls#Group1_versus_Group3.CMP_Pheno.cls#Group1_versus_Group3_repos
Phenotype	CMP_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	-0.3145346
Normalized Enrichment Score (NES)	-1.1901094
Nominal p-value	0.2615694
FDR q-value	0.9983094
FWER p-Value	0.921

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Prkcg	195	0.651	0.0079	No
2	Trat1	367	0.568	0.0148	No
3	Il2ra	425	0.550	0.0269	No
4	Brca1	1039	0.430	0.0075	No
5	Stab1	1267	0.401	0.0069	No
6	Tap2	1385	0.386	0.0115	No
7	Ube2n	1652	0.359	0.0078	No
8	Socs1	1749	0.350	0.0126	No
9	Il6	1933	0.335	0.0124	No
10	Zap70	2058	0.326	0.0150	No
11	Tap1	2130	0.321	0.0202	No
12	Eif3a	2181	0.318	0.0264	No
13	Tgfb2	2333	0.307	0.0271	No
14	Ccr5	2492	0.296	0.0272	No
15	Fas	2636	0.288	0.0278	No
16	Nlrp3	2899	0.269	0.0218	No
17	Cd1d2	3030	0.261	0.0223	No
18	Irf4	3179	0.252	0.0217	No
19	Il4ra	3696	0.223	0.0015	No
20	Ache	3835	0.215	0.0004	No
21	Ccr1	4082	0.203	-0.0066	No
22	Hcls1	4203	0.198	-0.0073	No
23	Dyrk3	4449	0.185	-0.0147	No
24	Map3k7	4464	0.184	-0.0103	No
25	Ccr2	4483	0.183	-0.0062	No
26	F2r	4486	0.183	-0.0013	No
27	Il1b	4620	0.178	-0.0032	No
28	Jak2	4754	0.172	-0.0053	No
29	Il10	4791	0.171	-0.0024	No
30	Stat1	4992	0.161	-0.0082	No
31	Lcp2	5009	0.160	-0.0046	No
32	Cdkn2a	5106	0.156	-0.0053	No
33	Mrpl3	5210	0.151	-0.0064	No
34	Galnt1	5245	0.149	-0.0040	No
35	Flna	5404	0.141	-0.0082	No
36	Itgal	5412	0.141	-0.0047	No
37	Wars1	5546	0.135	-0.0077	No
38	Abi1	5874	0.124	-0.0210	No
39	Eif4g3	5922	0.121	-0.0201	No
40	Abce1	6129	0.114	-0.0275	No
41	H2-DMb2	6298	0.110	-0.0330	No
42	Socs5	6353	0.107	-0.0328	No
43	Cd28	6355	0.107	-0.0299	No
44	Ly75	6452	0.103	-0.0320	No
45	Il15	6510	0.101	-0.0322	No
46	Il7	7286	0.072	-0.0697	No
47	Tpd52	7703	0.056	-0.0893	No
48	Fcgr2b	7810	0.053	-0.0933	No
49	Tapbp	8006	0.047	-0.1019	No
50	Ifngr1	8073	0.044	-0.1041	No
51	Mmp9	8079	0.044	-0.1031	No
52	Hif1a	8234	0.038	-0.1099	No
53	Elf4	8502	0.029	-0.1227	No
54	H2-Ob	8636	0.024	-0.1289	No
55	Nck1	8717	0.021	-0.1324	No
56	Acvr2a	8922	0.013	-0.1424	No
57	Il16	8990	0.010	-0.1455	No
58	Bcat1	9142	0.006	-0.1531	No
59	Lif	9292	0.000	-0.1607	No
60	Il11	9369	-0.001	-0.1645	No
61	Ptprc	9396	-0.002	-0.1658	No
62	Eif3j1	9661	-0.011	-0.1790	No
63	Cd79a	9710	-0.013	-0.1810	No
64	Tlr6	9761	-0.016	-0.1832	No
65	Spi1	9979	-0.023	-0.1936	No
66	Irf8	9980	-0.023	-0.1929	No
67	Prkcb	10236	-0.033	-0.2050	No
68	Ets1	10257	-0.034	-0.2051	No
69	Cd47	10571	-0.045	-0.2198	No
70	Ly86	10699	-0.049	-0.2250	No
71	Il18rap	10902	-0.056	-0.2337	No
72	Irf7	11144	-0.063	-0.2443	No
73	Akt1	11292	-0.068	-0.2499	No
74	C2	11322	-0.070	-0.2495	No
75	Ikbkb	11807	-0.089	-0.2717	No
76	Glmn	11945	-0.096	-0.2761	No
77	Capg	12100	-0.102	-0.2811	No
78	Bcl3	12168	-0.105	-0.2817	No
79	Npm1	12540	-0.119	-0.2973	No
80	Ncf4	12639	-0.123	-0.2989	No
81	Cd86	12725	-0.127	-0.2998	No
82	Ccnd2	12905	-0.134	-0.3052	No
83	Pf4	12992	-0.138	-0.3058	No
84	Il2	13035	-0.139	-0.3041	No
85	Bcl10	13086	-0.139	-0.3029	No
86	Stat4	13107	-0.141	-0.3000	No
87	Lyn	13115	-0.141	-0.2965	No
88	Map4k1	13246	-0.147	-0.2991	No
89	Eif3d	13396	-0.153	-0.3025	No
90	St8sia4	13398	-0.153	-0.2983	No
91	Traf2	13708	-0.167	-0.3095	Yes
92	Inhba	13733	-0.168	-0.3061	Yes
93	Fgr	13802	-0.171	-0.3049	Yes
94	Icosl	13803	-0.171	-0.3002	Yes
95	Tlr3	13829	-0.172	-0.2967	Yes
96	Igsf6	13919	-0.177	-0.2964	Yes
97	Csf1	14086	-0.185	-0.2998	Yes
98	Rpl3l	14151	-0.188	-0.2979	Yes
99	Il27ra	14343	-0.198	-0.3022	Yes
100	Ptpn6	14392	-0.201	-0.2992	Yes
101	Gcnt1	14458	-0.205	-0.2969	Yes
102	Rps9	14699	-0.216	-0.3032	Yes
103	Ripk2	14923	-0.228	-0.3083	Yes
104	Crtam	14966	-0.230	-0.3041	Yes
105	Egfr	15111	-0.237	-0.3050	Yes
106	Csk	15209	-0.240	-0.3033	Yes
107	Cd74	15321	-0.244	-0.3023	Yes
108	Cd247	15407	-0.249	-0.2998	Yes
109	Eif5a	15422	-0.250	-0.2936	Yes
110	Gpr65	15462	-0.252	-0.2887	Yes
111	Cxcl9	15624	-0.260	-0.2898	Yes
112	Itgb2	15741	-0.266	-0.2884	Yes
113	Rpl9	15865	-0.276	-0.2871	Yes
114	H2-Oa	15891	-0.278	-0.2807	Yes
115	Mtif2	16032	-0.288	-0.2799	Yes
116	Ifnar2	16043	-0.288	-0.2725	Yes
117	Lck	16097	-0.291	-0.2673	Yes
118	Ube2d1	16221	-0.299	-0.2653	Yes
119	Cfp	16241	-0.300	-0.2581	Yes
120	Itk	16447	-0.313	-0.2599	Yes
121	H2-DMa	16674	-0.328	-0.2624	Yes
122	Icam1	16779	-0.335	-0.2586	Yes
123	Tlr2	16800	-0.337	-0.2503	Yes
124	Tgfb1	16909	-0.345	-0.2464	Yes
125	Rps3a1	17061	-0.355	-0.2443	Yes
126	Il18	17107	-0.359	-0.2368	Yes
127	Il2rg	17153	-0.362	-0.2291	Yes
128	Apbb1	17174	-0.364	-0.2202	Yes
129	Degs1	17226	-0.367	-0.2127	Yes
130	Psmb10	17378	-0.381	-0.2099	Yes
131	Cd4	17446	-0.386	-0.2028	Yes
132	Thy1	17651	-0.404	-0.2021	Yes
133	Srgn	17653	-0.404	-0.1910	Yes
134	Ctss	17707	-0.409	-0.1825	Yes
135	Ccnd3	17954	-0.431	-0.1833	Yes
136	B2m	18059	-0.442	-0.1764	Yes
137	Ifngr2	18245	-0.460	-0.1733	Yes
138	Il12rb1	18363	-0.473	-0.1663	Yes
139	Il4	18528	-0.496	-0.1610	Yes
140	Il12a	18545	-0.499	-0.1482	Yes
141	Was	18554	-0.501	-0.1348	Yes
142	Elane	18725	-0.525	-0.1291	Yes
143	H2-Aa	18819	-0.541	-0.1190	Yes
144	Ltb	18841	-0.546	-0.1051	Yes
145	Hdac9	19051	-0.584	-0.0997	Yes
146	Ccl5	19331	-0.664	-0.0957	Yes
147	Nme1	19344	-0.667	-0.0781	Yes
148	Cd96	19382	-0.679	-0.0613	Yes
149	Cd80	19406	-0.694	-0.0435	Yes
150	Tlr1	19665	-0.882	-0.0324	Yes
151	Tnf	19766	-1.377	0.0003	Yes