Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	CMP.Basophil_Pheno.cls #Group1_versus_Group2.Basophil_Pheno.cls #Group1_versus_Group2_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	1
GeneSet	HALLMARK_APOPTOSIS
Enrichment Score (ES)	-0.27262205
Normalized Enrichment Score (NES)	-1.2387744
Nominal p-value	0.15243903
FDR q-value	0.31315497
FWER p-Value	0.861

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Bgn	136	0.747	0.0152	No
2	Mmp2	389	0.613	0.0206	No
3	Bnip3l	934	0.493	0.0075	No
4	Jun	999	0.481	0.0185	No
5	Bik	1116	0.463	0.0263	No
6	Txnip	1149	0.458	0.0382	No
7	Pdgfrb	1248	0.445	0.0464	No
8	Dpyd	1403	0.427	0.0513	No
9	Ccnd1	1424	0.426	0.0629	No
10	Fdxr	1795	0.387	0.0555	No
11	Ank	1885	0.379	0.0622	No
12	Dap	2059	0.363	0.0642	No
13	Il6	2233	0.348	0.0657	No
14	Gna15	2534	0.326	0.0600	No
15	Casp3	3002	0.296	0.0450	No
16	Pdcd4	3197	0.283	0.0435	No
17	Madd	3695	0.254	0.0257	No
18	Wee1	3906	0.244	0.0223	No
19	Plcb2	4096	0.234	0.0196	No
20	Tap1	4668	0.205	-0.0034	No
21	Slc20a1	4733	0.202	-0.0007	No
22	F2r	4933	0.192	-0.0051	No
23	Cflar	4973	0.189	-0.0015	No
24	Cav1	5020	0.188	0.0017	No
25	Ccnd2	5039	0.187	0.0063	No
26	Add1	5080	0.185	0.0098	No
27	Timp2	5109	0.184	0.0138	No
28	Bid	5289	0.175	0.0098	No
29	Casp9	5360	0.171	0.0113	No
30	Rela	5410	0.169	0.0138	No
31	Birc3	5432	0.168	0.0177	No
32	Rhob	5462	0.167	0.0212	No
33	Mgmt	5529	0.164	0.0227	No
34	Tgfb2	5628	0.159	0.0224	No
35	Gch1	5914	0.148	0.0123	No
36	Btg2	5970	0.144	0.0138	No
37	Dcn	5991	0.143	0.0170	No
38	Nedd9	5992	0.143	0.0212	No
39	Eno2	6043	0.140	0.0228	No
40	Rnasel	6146	0.136	0.0217	No
41	Casp6	6170	0.135	0.0245	No
42	Bcl2l11	6767	0.112	-0.0025	No
43	Dffa	6802	0.110	-0.0010	No
44	Sptan1	7003	0.101	-0.0082	No
45	Il18	7037	0.100	-0.0069	No
46	Casp7	7158	0.096	-0.0101	No
47	Rhot2	7286	0.090	-0.0139	No
48	Lef1	7334	0.089	-0.0137	No
49	Sqstm1	7401	0.086	-0.0145	No
50	Crebbp	7421	0.086	-0.0129	No
51	Xiap	7475	0.083	-0.0132	No
52	Hmox1	7698	0.075	-0.0223	No
53	Gpx4	7922	0.067	-0.0316	No
54	Psen1	7944	0.066	-0.0308	No
55	Pak1	8200	0.057	-0.0421	No
56	Ppp3r1	8312	0.053	-0.0462	No
57	Psen2	8369	0.050	-0.0475	No
58	Cd44	8487	0.046	-0.0521	No
59	Dap3	8559	0.044	-0.0544	No
60	Dnm1l	8596	0.042	-0.0550	No
61	Casp1	8739	0.038	-0.0611	No
62	Casp2	8906	0.031	-0.0687	No
63	Anxa1	8967	0.029	-0.0709	No
64	Dnajc3	9630	0.005	-0.1044	No
65	Ifngr1	9879	-0.002	-0.1170	No
66	Igf2r	10680	-0.031	-0.1568	No
67	Casp8	10703	-0.032	-0.1570	No
68	Fas	10768	-0.034	-0.1593	No
69	Gpx3	10877	-0.039	-0.1636	No
70	Hgf	10923	-0.041	-0.1647	No
71	Ctnnb1	11038	-0.045	-0.1692	No
72	Gsn	11201	-0.051	-0.1759	No
73	Rock1	11733	-0.070	-0.2009	No
74	Irf1	12240	-0.090	-0.2240	No
75	Sc5d	12349	-0.094	-0.2267	No
76	Isg20	12497	-0.099	-0.2313	No
77	Hmgb2	12840	-0.114	-0.2453	No
78	Cdk2	12921	-0.117	-0.2459	No
79	Ppt1	12967	-0.118	-0.2447	No
80	Timp3	13227	-0.131	-0.2540	No
81	Cyld	13276	-0.133	-0.2525	No
82	Dnaja1	13298	-0.134	-0.2497	No
83	Gsr	13445	-0.140	-0.2530	No
84	Bax	13553	-0.143	-0.2542	No
85	Retsat	13645	-0.147	-0.2545	No
86	Erbb3	13650	-0.147	-0.2503	No
87	H1f0	13746	-0.151	-0.2507	No
88	Cdc25b	13879	-0.157	-0.2528	No
89	Lmna	13975	-0.161	-0.2528	No
90	Sod1	14241	-0.172	-0.2612	No
91	Smad7	14322	-0.176	-0.2601	No
92	Bcap31	14374	-0.178	-0.2574	No
93	Krt18	14673	-0.190	-0.2670	Yes
94	Vdac2	14689	-0.191	-0.2621	Yes
95	Sat1	14796	-0.196	-0.2617	Yes
96	Il1b	14800	-0.196	-0.2560	Yes
97	Satb1	14924	-0.202	-0.2563	Yes
98	Cdkn1a	15001	-0.206	-0.2541	Yes
99	Ebp	15162	-0.213	-0.2559	Yes
100	Ddit3	15163	-0.214	-0.2496	Yes
101	Tspo	15461	-0.229	-0.2579	Yes
102	Casp4	15573	-0.235	-0.2566	Yes
103	Cth	15598	-0.237	-0.2508	Yes
104	Btg3	15727	-0.244	-0.2501	Yes
105	Cdkn1b	15732	-0.244	-0.2431	Yes
106	Tgfbr3	15758	-0.246	-0.2370	Yes
107	Ppp2r5b	15832	-0.250	-0.2334	Yes
108	Sod2	15961	-0.256	-0.2323	Yes
109	Rara	16028	-0.260	-0.2279	Yes
110	Bcl10	16233	-0.270	-0.2303	Yes
111	Tnfrsf12a	16239	-0.271	-0.2225	Yes
112	Brca1	16260	-0.273	-0.2155	Yes
113	Bcl2l1	16435	-0.282	-0.2159	Yes
114	Bcl2l2	16707	-0.298	-0.2209	Yes
115	Tnfsf10	16834	-0.309	-0.2182	Yes
116	Top2a	17196	-0.338	-0.2266	Yes
117	Gadd45a	17427	-0.354	-0.2278	Yes
118	Lgals3	17583	-0.367	-0.2248	Yes
119	Gadd45b	17693	-0.375	-0.2192	Yes
120	Pea15a	17732	-0.378	-0.2100	Yes
121	Ier3	17754	-0.380	-0.1998	Yes
122	Gstm2	17890	-0.393	-0.1950	Yes
123	Etf1	17897	-0.394	-0.1836	Yes
124	Diablo	18038	-0.406	-0.1787	Yes
125	Gpx1	18055	-0.408	-0.1674	Yes
126	Cd38	18135	-0.417	-0.1591	Yes
127	Tnf	18166	-0.421	-0.1482	Yes
128	Mcl1	18252	-0.431	-0.1397	Yes
129	Cd14	18304	-0.436	-0.1294	Yes
130	Clu	18409	-0.448	-0.1214	Yes
131	Ifitm3	18505	-0.459	-0.1126	Yes
132	Pmaip1	18688	-0.481	-0.1076	Yes
133	Emp1	19193	-0.577	-0.1162	Yes
134	App	19215	-0.584	-0.1000	Yes
135	Cd69	19226	-0.587	-0.0831	Yes
136	Bmf	19289	-0.603	-0.0684	Yes
137	Atf3	19469	-0.665	-0.0578	Yes
138	Ptk2	19502	-0.679	-0.0393	Yes
139	Nefh	19674	-0.820	-0.0237	Yes
140	Aifm3	19736	-0.964	0.0018	Yes