DatasetCLP.Basophil_Pheno.cls
#Group6_versus_Group8.Basophil_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeBasophil_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class5
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.39835623
Normalized Enrichment Score (NES)-1.5689131
Nominal p-value0.02972399
FDR q-value0.17079215
FWER p-Value0.217
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Irf491.4600.0346No
2Cdkn1a2990.7610.0370No
3Il15ra5370.6360.0392No
4Batf212520.4910.0119No
5Nup9314980.4500.0092No
6Ccl520500.411-0.0111No
7Pnp23970.385-0.0209No
8Helz224740.377-0.0160No
9Ciita26700.354-0.0182No
10Bpgm26800.352-0.0102No
11Selp29010.326-0.0145No
12Nmi31580.305-0.0212No
13Irf734400.287-0.0297No
14Il2rb34930.283-0.0258No
15Cxcl1035970.276-0.0248No
16Bank136520.272-0.0212No
17Cfb37190.270-0.0184No
18Tnfsf1038670.262-0.0201No
19Vcam142140.249-0.0331No
20Nampt48620.225-0.0632No
21Herc648780.224-0.0586No
22Auts249110.222-0.0551No
23Rapgef650850.210-0.0595No
24Marchf151420.207-0.0576No
25Ptpn154270.190-0.0686No
26Ifit257160.174-0.0802No
27Ptpn258070.169-0.0811No
28Arl4a59780.160-0.0866No
29Casp360320.157-0.0857No
30Mthfd261970.149-0.0911No
31Casp162660.145-0.0914No
32Slamf766830.124-0.1112No
33Cmklr168250.117-0.1161No
34Parp1269280.112-0.1190No
35Stat470090.109-0.1208No
36Dhx5872500.096-0.1316No
37Cd6972930.095-0.1317No
38Ripk173420.093-0.1321No
39Cd3877800.072-0.1543No
40Rigi78910.067-0.1587No
41Hif1a83160.046-0.1809No
42Trim2183930.043-0.1840No
43Plscr184250.041-0.1847No
44Bst284640.039-0.1859No
45Psmb985120.037-0.1876No
46Rnf21386400.031-0.1938No
47Isoc186790.029-0.1952No
48Nlrc586900.029-0.1950No
49Casp887110.028-0.1955No
50St3gal588380.023-0.2018No
51Pfkp88440.023-0.2016No
52Trim2590220.015-0.2109No
53Ube2l691880.008-0.2198No
54Il792270.006-0.2217No
55Fcgr192860.003-0.2248No
56Pnpt19781-0.003-0.2518No
57Lysmd29806-0.004-0.2530No
58Rnf319827-0.005-0.2540No
59Wars19961-0.010-0.2610No
60Itgb79973-0.010-0.2614No
61Rbck19983-0.011-0.2616No
62Pml10127-0.017-0.2691No
63Sod210139-0.017-0.2693No
64Vamp810201-0.020-0.2721No
65Lap310327-0.025-0.2784No
66Irf210432-0.030-0.2833No
67Btg110567-0.036-0.2898No
68Tnfaip310591-0.037-0.2902No
69Cmtr110715-0.041-0.2959No
70Nfkbia10818-0.046-0.3004No
71Xaf110860-0.047-0.3016No
72Lats210987-0.053-0.3072No
73Ncoa311009-0.054-0.3070No
74Trafd111109-0.058-0.3111No
75Casp411235-0.061-0.3164No
76Ogfr11409-0.069-0.3243No
77Adar11560-0.075-0.3307No
78H2-DMa11607-0.077-0.3314No
79Samd9l11675-0.080-0.3331No
80Pla2g4a11688-0.081-0.3318No
81Nod111739-0.083-0.3326No
82Ptpn612321-0.108-0.3618No
83Eif2ak212565-0.121-0.3722No
84Il4ra12735-0.128-0.3784No
85Tap112900-0.136-0.3842No
86Pim113052-0.144-0.3890No
87Samhd113097-0.147-0.3879No
88Parp1413169-0.150-0.3882No
89Oas313182-0.151-0.3852No
90Tor1b13258-0.155-0.3856No
91Peli113303-0.157-0.3843No
92Irf113359-0.160-0.3834No
93Znfx113632-0.173-0.3942Yes
94Tdrd713693-0.177-0.3932Yes
95Psma213727-0.179-0.3908Yes
96Il18bp13783-0.183-0.3894Yes
97P2ry1413859-0.186-0.3891Yes
98Ifit313863-0.186-0.3848Yes
99Gbp314027-0.194-0.3890Yes
100Psmb214044-0.195-0.3852Yes
101Jak214107-0.199-0.3838Yes
102Myd8814126-0.200-0.3800Yes
103Trim1414193-0.203-0.3788Yes
104Oasl114203-0.204-0.3744Yes
105Isg1514405-0.216-0.3802Yes
106Mx214480-0.221-0.3790Yes
107Epsti114501-0.222-0.3748Yes
108Cmpk214502-0.222-0.3694Yes
109Ly6e14533-0.224-0.3657Yes
110Rtp414617-0.229-0.3648Yes
111Stat114705-0.234-0.3639Yes
112Psmb1014741-0.235-0.3602Yes
113St8sia414777-0.238-0.3564Yes
114Fgl214866-0.244-0.3554Yes
115Ifih114927-0.247-0.3528Yes
116Casp715126-0.260-0.3574Yes
117Sppl2a15139-0.261-0.3518Yes
118Tnfaip215172-0.262-0.3472Yes
119Cd27415283-0.269-0.3468Yes
120Slc25a2815652-0.291-0.3600Yes
121Mvp15658-0.292-0.3532Yes
122Ripk215722-0.297-0.3496Yes
123Pde4b15733-0.297-0.3430Yes
124Stat215738-0.298-0.3361Yes
125Sri15784-0.301-0.3313Yes
126Psma315793-0.301-0.3245Yes
127Ifi4415805-0.302-0.3179Yes
128Ifi2715866-0.307-0.3138Yes
129Fas16074-0.317-0.3175Yes
130Cd7416154-0.324-0.3141Yes
131Gch116227-0.330-0.3101Yes
132Socs116241-0.331-0.3029Yes
133Rsad216310-0.335-0.2986Yes
134Icam116326-0.337-0.2913Yes
135Tapbp16472-0.348-0.2909Yes
136Lgals3bp16667-0.364-0.2928Yes
137Lcp216668-0.365-0.2841Yes
138Arid5b16745-0.373-0.2793Yes
139Ifitm316768-0.376-0.2715Yes
140Ddx6016906-0.389-0.2697Yes
141Cd8616935-0.392-0.2618Yes
142Trim2616948-0.393-0.2530Yes
143Eif4e316952-0.393-0.2437Yes
144Ifi3017040-0.402-0.2389Yes
145B2m17061-0.404-0.2303Yes
146Nfkb117093-0.409-0.2221Yes
147Isg2017123-0.412-0.2139Yes
148Txnip17131-0.413-0.2043Yes
149Gpr1817138-0.414-0.1947Yes
150Socs317142-0.414-0.1850Yes
151Irf517373-0.446-0.1869Yes
152Sp11017385-0.448-0.1767Yes
153Stat317477-0.463-0.1706Yes
154Irf817520-0.473-0.1616Yes
155Ifnar217530-0.475-0.1507Yes
156Psme117566-0.480-0.1411Yes
157Ifitm217570-0.480-0.1297Yes
158Il1517703-0.504-0.1249Yes
159Oas217786-0.520-0.1169Yes
160Psme217964-0.566-0.1130Yes
161Vamp517986-0.573-0.1004Yes
162H2-Aa18074-0.600-0.0908Yes
163Usp1818153-0.633-0.0798Yes
164Ifi3518261-0.711-0.0686Yes
165Irf918268-0.721-0.0517Yes
166Zbp118288-0.747-0.0348Yes
167Psmb818343-0.827-0.0179Yes
168Il10ra18369-0.8910.0021Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE