Details for gene set HALLMARK_EPITHELIAL_MESENCHYMAL

Table: GSEA Results Summary

Dataset	CLP.Basophil_Pheno.cls #Group6_versus_Group8.Basophil_Pheno.cls #Group6_versus_Group8_repos
Phenotype	Basophil_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	4
GeneSet	HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION
Enrichment Score (ES)	0.23604661
Normalized Enrichment Score (NES)	0.9657968
Nominal p-value	0.52362204
FDR q-value	0.7389809
FWER p-Value	0.996

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Cadm1	95	0.984	0.0233	Yes
2	Tgm2	136	0.895	0.0470	Yes
3	Col7a1	347	0.746	0.0571	Yes
4	Slit3	466	0.668	0.0700	Yes
5	Fbln1	621	0.608	0.0792	Yes
6	Tagln	638	0.601	0.0957	Yes
7	Dpysl3	759	0.582	0.1060	Yes
8	Edil3	905	0.565	0.1144	Yes
9	Cdh2	951	0.560	0.1282	Yes
10	Gja1	987	0.554	0.1423	Yes
11	Magee1	1017	0.546	0.1565	Yes
12	Pmepa1	1113	0.520	0.1664	Yes
13	Cap2	1142	0.514	0.1797	Yes
14	Lgals1	1161	0.509	0.1935	Yes
15	Lamc1	1210	0.500	0.2053	Yes
16	Timp3	1566	0.440	0.1987	Yes
17	Comp	1747	0.427	0.2012	Yes
18	Tgfbr3	1936	0.416	0.2029	Yes
19	Eno2	2029	0.411	0.2098	Yes
20	Thbs2	2030	0.411	0.2217	Yes
21	Tgfbi	2389	0.386	0.2133	Yes
22	Calu	2519	0.371	0.2170	Yes
23	Plod2	2752	0.343	0.2142	Yes
24	Vcan	3075	0.311	0.2056	Yes
25	Cd44	3109	0.309	0.2127	Yes
26	Cald1	3187	0.302	0.2173	Yes
27	Plaur	3362	0.292	0.2162	Yes
28	Id2	3550	0.279	0.2141	Yes
29	P3h1	3608	0.275	0.2189	Yes
30	Itga5	3640	0.273	0.2251	Yes
31	Plod3	3666	0.271	0.2316	Yes
32	Dab2	3764	0.269	0.2341	Yes
33	Plod1	3868	0.262	0.2360	Yes
34	Vcam1	4214	0.249	0.2244	No
35	Col12a1	4391	0.240	0.2217	No
36	Nt5e	4392	0.240	0.2287	No
37	Mest	4775	0.227	0.2143	No
38	Spp1	5164	0.205	0.1991	No
39	Copa	5254	0.200	0.2000	No
40	Pcolce	5273	0.199	0.2048	No
41	Lrp1	5478	0.187	0.1991	No
42	Thy1	5675	0.176	0.1934	No
43	Thbs1	5804	0.169	0.1913	No
44	Anpep	6137	0.152	0.1776	No
45	Itgav	6353	0.142	0.1699	No
46	Vegfa	6377	0.140	0.1727	No
47	Itgb3	6517	0.132	0.1689	No
48	Rhob	6708	0.123	0.1621	No
49	Abi3bp	6868	0.116	0.1568	No
50	Slit2	6922	0.113	0.1571	No
51	Serpinh1	6973	0.111	0.1576	No
52	Mylk	7107	0.105	0.1534	No
53	Fbn1	7130	0.103	0.1551	No
54	Matn2	7158	0.102	0.1566	No
55	Gpx7	7727	0.074	0.1277	No
56	Pdgfrb	7811	0.071	0.1252	No
57	Mcm7	8043	0.059	0.1143	No
58	Jun	8059	0.058	0.1151	No
59	Spock1	8170	0.052	0.1106	No
60	Fgf2	8315	0.046	0.1041	No
61	Flna	8327	0.046	0.1048	No
62	Capg	8415	0.041	0.1013	No
63	Gpc1	8631	0.031	0.0904	No
64	Fn1	8754	0.025	0.0844	No
65	Gem	8835	0.023	0.0807	No
66	Col16a1	8867	0.021	0.0797	No
67	Tpm4	8962	0.017	0.0750	No
68	Sdc4	9003	0.016	0.0733	No
69	Tpm2	9231	0.006	0.0610	No
70	Vegfc	9784	-0.003	0.0309	No
71	Notch2	9830	-0.005	0.0286	No
72	Serpine2	10078	-0.015	0.0155	No
73	Col1a2	10104	-0.016	0.0146	No
74	Adam12	10125	-0.017	0.0140	No
75	Tgfb1	10339	-0.026	0.0031	No
76	Gadd45a	10377	-0.028	0.0019	No
77	Dst	10434	-0.030	-0.0003	No
78	Tnfaip3	10591	-0.037	-0.0078	No
79	Sparc	11100	-0.058	-0.0339	No
80	Pfn2	11717	-0.083	-0.0652	No
81	Cdh11	11879	-0.089	-0.0714	No
82	Sfrp4	12173	-0.102	-0.0845	No
83	Col5a1	12236	-0.104	-0.0848	No
84	Itga2	12316	-0.108	-0.0860	No
85	Sdc1	12396	-0.112	-0.0871	No
86	Ecm2	12756	-0.129	-0.1030	No
87	Wipf1	12830	-0.132	-0.1032	No
88	Pvr	13040	-0.144	-0.1104	No
89	Sgcb	13268	-0.155	-0.1184	No
90	Ecm1	13356	-0.160	-0.1185	No
91	Col1a1	13383	-0.162	-0.1152	No
92	Ppib	13478	-0.166	-0.1156	No
93	Col4a2	13700	-0.177	-0.1225	No
94	Itgb1	13942	-0.189	-0.1302	No
95	Gadd45b	14247	-0.206	-0.1409	No
96	Postn	14271	-0.208	-0.1361	No
97	Sat1	14461	-0.219	-0.1401	No
98	Sgcd	14660	-0.231	-0.1443	No
99	Mmp14	14800	-0.240	-0.1450	No
100	Col11a1	15111	-0.259	-0.1544	No
101	Lama3	15416	-0.279	-0.1629	No
102	Colgalt1	15604	-0.288	-0.1648	No
103	Ntm	15783	-0.301	-0.1659	No
104	Col4a1	15807	-0.303	-0.1584	No
105	Tnfrsf12a	15846	-0.305	-0.1516	No
106	Tpm1	15856	-0.306	-0.1432	No
107	Fas	16074	-0.317	-0.1459	No
108	Slc6a8	16361	-0.340	-0.1518	No
109	Itgb5	16413	-0.342	-0.1446	No
110	Fstl3	16912	-0.390	-0.1606	No
111	Basp1	17056	-0.404	-0.1567	No
112	Fap	17076	-0.407	-0.1460	No
113	Igfbp4	17125	-0.412	-0.1367	No
114	Lama2	17223	-0.425	-0.1297	No
115	Nid2	17235	-0.426	-0.1180	No
116	Fzd8	17266	-0.430	-0.1072	No
117	Sntb1	17451	-0.458	-0.1040	No
118	Glipr1	17572	-0.481	-0.0966	No
119	Il15	17703	-0.504	-0.0891	No
120	Fuca1	17842	-0.532	-0.0813	No
121	Qsox1	17888	-0.546	-0.0679	No
122	Emp3	17951	-0.560	-0.0551	No
123	Fstl1	18116	-0.611	-0.0464	No
124	Bmp1	18182	-0.650	-0.0311	No
125	Vim	18252	-0.704	-0.0145	No
126	Mmp2	18318	-0.795	0.0049	No