Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	CLP.Basophil_Pheno.cls #Group6_versus_Group8.Basophil_Pheno.cls #Group6_versus_Group8_repos
Phenotype	Basophil_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	5
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.25938708
Normalized Enrichment Score (NES)	-1.1701204
Nominal p-value	0.2020202
FDR q-value	0.4344014
FWER p-Value	0.943

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ncbp2	635	0.601	-0.0179	No
2	Gtf2h5	649	0.598	-0.0018	No
3	Ercc1	1013	0.546	-0.0063	No
4	Pom121	1027	0.544	0.0083	No
5	Tarbp2	1229	0.496	0.0112	No
6	Snapc4	1234	0.495	0.0249	No
7	Taf6	1363	0.472	0.0311	No
8	Sec61a1	1407	0.463	0.0418	No
9	Dgcr8	1659	0.433	0.0402	No
10	Rpa2	1726	0.429	0.0486	No
11	Polr1h	1842	0.421	0.0542	No
12	Rfc4	1844	0.421	0.0659	No
13	Pde6g	2065	0.411	0.0654	No
14	Polr2c	2147	0.404	0.0723	No
15	Gtf2h1	2369	0.388	0.0711	No
16	Pnp	2397	0.385	0.0804	No
17	Polr2k	2491	0.374	0.0858	No
18	Taf1c	2695	0.350	0.0846	No
19	Nudt21	2794	0.338	0.0887	No
20	Sac3d1	3059	0.313	0.0830	No
21	Mpc2	3148	0.306	0.0868	No
22	Taf10	3251	0.299	0.0896	No
23	Bcap31	3255	0.299	0.0978	No
24	Pola2	3541	0.280	0.0901	No
25	Nudt9	3819	0.265	0.0824	No
26	Ssrp1	3828	0.264	0.0894	No
27	Gtf3c5	3913	0.259	0.0921	No
28	Polr2g	3933	0.257	0.0982	No
29	Npr2	3993	0.254	0.1022	No
30	Ddb1	4207	0.249	0.0975	No
31	Pola1	4325	0.244	0.0979	No
32	Rfc5	4357	0.242	0.1030	No
33	Gtf2h3	4613	0.235	0.0957	No
34	Rad51	4617	0.235	0.1021	No
35	Mpg	4710	0.229	0.1035	No
36	Tyms	4917	0.221	0.0984	No
37	Rae1	4948	0.219	0.1030	No
38	Clp1	5015	0.215	0.1054	No
39	Pcna	5201	0.203	0.1010	No
40	Rev3l	5436	0.190	0.0935	No
41	Polr2a	5476	0.187	0.0966	No
42	Aaas	5496	0.186	0.1008	No
43	Fen1	5576	0.181	0.1016	No
44	Pold3	5999	0.159	0.0829	No
45	Ercc8	6037	0.157	0.0853	No
46	Ercc5	6119	0.153	0.0852	No
47	Polh	6160	0.151	0.0872	No
48	Prim1	6249	0.146	0.0865	No
49	Polr2h	6250	0.146	0.0906	No
50	Ddb2	6379	0.140	0.0875	No
51	Ercc2	6697	0.124	0.0736	No
52	Gpx4	6784	0.120	0.0723	No
53	Cstf3	7007	0.109	0.0632	No
54	Itpa	7043	0.108	0.0643	No
55	Supt4a	7190	0.100	0.0591	No
56	Rad52	7462	0.087	0.0467	No
57	Dad1	7772	0.073	0.0318	No
58	Mrpl40	7898	0.066	0.0269	No
59	Bcam	8341	0.045	0.0039	No
60	Nfx1	8344	0.045	0.0051	No
61	Poll	8467	0.038	-0.0005	No
62	Srsf6	8548	0.035	-0.0039	No
63	Umps	8644	0.031	-0.0083	No
64	Lig1	8660	0.030	-0.0082	No
65	Nelfcd	8714	0.028	-0.0104	No
66	Cant1	8734	0.026	-0.0107	No
67	Supt5	8744	0.026	-0.0104	No
68	Pold1	8790	0.024	-0.0122	No
69	Stx3	8948	0.018	-0.0203	No
70	Polr3c	9285	0.004	-0.0386	No
71	Ell	9790	-0.003	-0.0661	No
72	Guk1	9829	-0.005	-0.0681	No
73	Polr1d	9891	-0.007	-0.0712	No
74	Polr2f	9965	-0.010	-0.0749	No
75	Dguok	9968	-0.010	-0.0747	No
76	Zfp707	9996	-0.011	-0.0759	No
77	Taf12	10102	-0.016	-0.0812	No
78	Nt5c3	10138	-0.017	-0.0826	No
79	Gtf2f1	10323	-0.025	-0.0920	No
80	Adrm1	10569	-0.036	-0.1044	No
81	Polr2e	10723	-0.042	-0.1116	No
82	Zwint	10790	-0.045	-0.1140	No
83	Polr2j	10877	-0.048	-0.1173	No
84	Polr2i	10921	-0.050	-0.1183	No
85	Impdh2	11279	-0.063	-0.1360	No
86	Ak3	11285	-0.063	-0.1345	No
87	Ak1	11406	-0.069	-0.1392	No
88	Smad5	11726	-0.083	-0.1543	No
89	Trp53	11727	-0.083	-0.1520	No
90	Taf9	11869	-0.088	-0.1572	No
91	Ada	11928	-0.091	-0.1579	No
92	Pole4	11955	-0.092	-0.1567	No
93	Ercc4	12024	-0.096	-0.1577	No
94	Ercc3	12379	-0.111	-0.1740	No
95	Nelfe	12427	-0.113	-0.1734	No
96	Nme3	12449	-0.114	-0.1713	No
97	Polr1c	12464	-0.115	-0.1688	No
98	Nme4	12542	-0.120	-0.1697	No
99	Tk2	12766	-0.129	-0.1783	No
100	Cetn2	12839	-0.133	-0.1785	No
101	Nelfb	12865	-0.134	-0.1761	No
102	Rala	12998	-0.142	-0.1793	No
103	Gtf2b	13016	-0.142	-0.1762	No
104	Polr3gl	13322	-0.158	-0.1885	No
105	Usp11	13503	-0.167	-0.1937	No
106	Tsg101	13542	-0.168	-0.1910	No
107	Sdcbp	14282	-0.209	-0.2256	No
108	Nme1	14304	-0.209	-0.2209	No
109	Rfc2	14351	-0.213	-0.2174	No
110	Dut	14382	-0.215	-0.2131	No
111	Cmpk2	14502	-0.222	-0.2133	No
112	Brf2	14623	-0.229	-0.2135	No
113	Vps37b	14635	-0.230	-0.2076	No
114	Upf3b	15372	-0.276	-0.2402	No
115	Eif1b	15724	-0.297	-0.2510	Yes
116	Edf1	15727	-0.297	-0.2428	Yes
117	Pde4b	15733	-0.297	-0.2347	Yes
118	Cox17	15847	-0.306	-0.2323	Yes
119	Dctn4	15979	-0.310	-0.2308	Yes
120	Xpc	16042	-0.315	-0.2254	Yes
121	Snapc5	16314	-0.335	-0.2308	Yes
122	Hcls1	16553	-0.355	-0.2338	Yes
123	Sf3a3	16614	-0.359	-0.2270	Yes
124	Rpa3	16631	-0.361	-0.2178	Yes
125	Gtf2a2	16682	-0.366	-0.2102	Yes
126	Aprt	16755	-0.373	-0.2037	Yes
127	Gmpr2	16897	-0.388	-0.2005	Yes
128	Arl6ip1	16940	-0.392	-0.1918	Yes
129	Rnmt	16964	-0.394	-0.1820	Yes
130	Rbx1	16968	-0.395	-0.1711	Yes
131	Surf1	17323	-0.438	-0.1781	Yes
132	Rfc3	17473	-0.462	-0.1733	Yes
133	Nt5c	17514	-0.472	-0.1622	Yes
134	Vps28	17751	-0.513	-0.1608	Yes
135	Eloa	17972	-0.568	-0.1569	Yes
136	Alyref	17992	-0.574	-0.1418	Yes
137	Ago4	18042	-0.586	-0.1280	Yes
138	Polb	18086	-0.602	-0.1134	Yes
139	Adcy6	18170	-0.644	-0.0999	Yes
140	Gsdme	18230	-0.683	-0.0839	Yes
141	Taf13	18234	-0.686	-0.0648	Yes
142	Polr2d	18243	-0.696	-0.0457	Yes
143	Rrm2b	18321	-0.797	-0.0275	Yes
144	Pold4	18400	-1.147	0.0004	Yes