Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	CLP.Basophil_Pheno.cls #Group6_versus_Group8.Basophil_Pheno.cls #Group6_versus_Group8_repos
Phenotype	Basophil_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	5
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	-0.2766022
Normalized Enrichment Score (NES)	-1.2747561
Nominal p-value	0.08798283
FDR q-value	0.36487687
FWER p-Value	0.816

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Irf4	9	1.460	0.0369	No
2	Apbb1	344	0.750	0.0378	No
3	Ube2n	570	0.621	0.0413	No
4	Cd7	777	0.580	0.0449	No
5	Il27ra	1152	0.511	0.0375	No
6	Ets1	1214	0.499	0.0470	No
7	Prkcb	1395	0.466	0.0490	No
8	Cd247	1472	0.454	0.0565	No
9	Itk	1943	0.415	0.0414	No
10	Tlr3	2001	0.412	0.0488	No
11	Ccl5	2050	0.411	0.0567	No
12	Klrd1	2262	0.396	0.0553	No
13	Ncf4	2377	0.387	0.0589	No
14	Il11	2394	0.385	0.0679	No
15	Cd28	2424	0.381	0.0761	No
16	Igsf6	2427	0.381	0.0857	No
17	Bcat1	2463	0.378	0.0935	No
18	Elane	2598	0.362	0.0954	No
19	Cd4	2606	0.360	0.1042	No
20	Gcnt1	2989	0.318	0.0914	No
21	Akt1	3048	0.314	0.0963	No
22	Irf7	3440	0.287	0.0822	No
23	Il2rb	3493	0.283	0.0866	No
24	Bcl10	3851	0.263	0.0738	No
25	Brca1	3902	0.259	0.0777	No
26	Csf1	3908	0.259	0.0841	No
27	Elf4	4130	0.250	0.0784	No
28	Il4	4135	0.249	0.0845	No
29	Cdkn2a	4219	0.249	0.0864	No
30	Ccr1	4308	0.246	0.0878	No
31	Il18rap	4362	0.241	0.0911	No
32	Acvr2a	4570	0.238	0.0859	No
33	H2-Ob	4606	0.236	0.0900	No
34	Zap70	5062	0.212	0.0705	No
35	Map3k7	5118	0.208	0.0728	No
36	Fcgr2b	5157	0.206	0.0760	No
37	Cd96	5275	0.199	0.0747	No
38	Itgb2	5377	0.193	0.0741	No
39	Lck	5534	0.184	0.0703	No
40	Ly75	5574	0.181	0.0728	No
41	Thy1	5675	0.176	0.0718	No
42	Eif3a	5934	0.163	0.0618	No
43	Fgr	6275	0.144	0.0469	No
44	Map4k1	6375	0.140	0.0451	No
45	Trat1	6587	0.129	0.0368	No
46	Tnf	6627	0.127	0.0379	No
47	Stat4	7009	0.109	0.0199	No
48	Galnt1	7102	0.105	0.0175	No
49	Cd47	7149	0.102	0.0176	No
50	Tgfb2	7370	0.092	0.0079	No
51	Nck1	7525	0.083	0.0016	No
52	Traf2	7752	0.073	-0.0089	No
53	Eif5a	8305	0.047	-0.0379	No
54	Hif1a	8316	0.046	-0.0373	No
55	Flna	8327	0.046	-0.0367	No
56	Capg	8415	0.041	-0.0404	No
57	Tap2	8604	0.032	-0.0498	No
58	Ikbkb	8699	0.028	-0.0543	No
59	Il7	9227	0.006	-0.0830	No
60	Icosl	9809	-0.004	-0.1147	No
61	Wars1	9961	-0.010	-0.1227	No
62	Abce1	10051	-0.014	-0.1272	No
63	Crtam	10129	-0.017	-0.1310	No
64	Lyn	10228	-0.021	-0.1358	No
65	H2-DMb2	10233	-0.021	-0.1355	No
66	F2r	10296	-0.024	-0.1383	No
67	Tgfb1	10339	-0.026	-0.1399	No
68	Prkcg	10405	-0.029	-0.1427	No
69	Ly86	10440	-0.031	-0.1438	No
70	Abi1	10471	-0.032	-0.1446	No
71	Csk	10491	-0.033	-0.1448	No
72	Ltb	10609	-0.038	-0.1503	No
73	C2	10864	-0.047	-0.1630	No
74	Cd80	10963	-0.052	-0.1670	No
75	Eif4g3	11524	-0.074	-0.1958	No
76	H2-DMa	11607	-0.077	-0.1983	No
77	Il2rg	11624	-0.078	-0.1972	No
78	Cd79a	11837	-0.088	-0.2065	No
79	Il10	12066	-0.097	-0.2165	No
80	Ptpn6	12321	-0.108	-0.2277	No
81	Ccnd3	12676	-0.126	-0.2438	No
82	Il4ra	12735	-0.128	-0.2437	No
83	Spi1	12859	-0.134	-0.2470	No
84	Tap1	12900	-0.136	-0.2458	No
85	Ptprc	13142	-0.149	-0.2551	No
86	Glmn	13385	-0.162	-0.2643	No
87	Socs5	13392	-0.162	-0.2604	No
88	Pf4	13564	-0.170	-0.2655	No
89	Eif3d	13677	-0.176	-0.2671	No
90	Fasl	13807	-0.184	-0.2694	No
91	H2-Oa	13939	-0.189	-0.2718	Yes
92	Npm1	13943	-0.189	-0.2671	Yes
93	Eif3j1	14080	-0.197	-0.2695	Yes
94	Jak2	14107	-0.199	-0.2658	Yes
95	Stab1	14263	-0.207	-0.2690	Yes
96	Nme1	14304	-0.209	-0.2658	Yes
97	Tpd52	14321	-0.211	-0.2613	Yes
98	Mrpl3	14394	-0.215	-0.2598	Yes
99	Tlr6	14490	-0.221	-0.2593	Yes
100	Nlrp3	14544	-0.225	-0.2564	Yes
101	Degs1	14701	-0.233	-0.2590	Yes
102	Stat1	14705	-0.234	-0.2532	Yes
103	Psmb10	14741	-0.235	-0.2491	Yes
104	Srgn	14746	-0.236	-0.2433	Yes
105	St8sia4	14777	-0.238	-0.2388	Yes
106	Ache	14855	-0.243	-0.2368	Yes
107	Ccnd2	15316	-0.272	-0.2551	Yes
108	Hdac9	15540	-0.283	-0.2600	Yes
109	Itgal	15543	-0.283	-0.2529	Yes
110	Dyrk3	15574	-0.286	-0.2472	Yes
111	Ripk2	15722	-0.297	-0.2477	Yes
112	Tlr2	15803	-0.302	-0.2443	Yes
113	Tlr1	15827	-0.304	-0.2378	Yes
114	Cfp	15974	-0.310	-0.2379	Yes
115	Fas	16074	-0.317	-0.2352	Yes
116	Cd74	16154	-0.324	-0.2312	Yes
117	Was	16156	-0.324	-0.2230	Yes
118	Socs1	16241	-0.331	-0.2191	Yes
119	Icam1	16326	-0.337	-0.2151	Yes
120	Tapbp	16472	-0.348	-0.2141	Yes
121	Ccr5	16482	-0.349	-0.2057	Yes
122	Hcls1	16553	-0.355	-0.2004	Yes
123	Lcp2	16668	-0.365	-0.1973	Yes
124	Cd1d2	16814	-0.380	-0.1956	Yes
125	Ube2d1	16915	-0.390	-0.1911	Yes
126	Cd86	16935	-0.392	-0.1821	Yes
127	B2m	17061	-0.404	-0.1786	Yes
128	Il12a	17088	-0.408	-0.1696	Yes
129	Ctss	17129	-0.412	-0.1612	Yes
130	Bcl3	17207	-0.423	-0.1546	Yes
131	Egfr	17425	-0.454	-0.1548	Yes
132	Il18	17456	-0.459	-0.1447	Yes
133	Mtif2	17471	-0.462	-0.1337	Yes
134	Ifngr2	17482	-0.463	-0.1224	Yes
135	Ccr2	17494	-0.466	-0.1110	Yes
136	Ifngr1	17508	-0.470	-0.0997	Yes
137	Irf8	17520	-0.473	-0.0882	Yes
138	Ifnar2	17530	-0.475	-0.0766	Yes
139	Rpl9	17543	-0.476	-0.0650	Yes
140	Rps3a1	17584	-0.484	-0.0549	Yes
141	Rpl3l	17613	-0.488	-0.0439	Yes
142	Il15	17703	-0.504	-0.0359	Yes
143	Il16	17734	-0.510	-0.0245	Yes
144	Gpr65	17835	-0.530	-0.0164	Yes
145	Il12rb1	17920	-0.552	-0.0069	Yes
146	H2-Aa	18074	-0.600	0.0001	Yes
147	Rps9	18256	-0.708	0.0083	Yes