Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	CLP.Basophil_Pheno.cls #Group3_versus_Group4.Basophil_Pheno.cls #Group3_versus_Group4_repos
Phenotype	Basophil_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	2
GeneSet	HALLMARK_MYOGENESIS
Enrichment Score (ES)	0.30066267
Normalized Enrichment Score (NES)	1.291532
Nominal p-value	0.103515625
FDR q-value	0.5010014
FWER p-Value	0.817

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Rit1	309	0.680	0.0043	Yes
2	Kcnh2	346	0.664	0.0230	Yes
3	Gsn	506	0.597	0.0329	Yes
4	Csrp3	562	0.582	0.0480	Yes
5	Ak1	720	0.546	0.0564	Yes
6	Clu	727	0.545	0.0730	Yes
7	Fhl1	773	0.533	0.0872	Yes
8	Erbb3	923	0.504	0.0947	Yes
9	Ache	969	0.494	0.1076	Yes
10	Smtn	1060	0.485	0.1178	Yes
11	Kifc3	1144	0.472	0.1279	Yes
12	Mapk12	1228	0.456	0.1376	Yes
13	Prnp	1437	0.432	0.1397	Yes
14	Adam12	1509	0.422	0.1489	Yes
15	Cnn3	1534	0.420	0.1607	Yes
16	Fdps	1608	0.412	0.1695	Yes
17	Cox7a1	1711	0.398	0.1763	Yes
18	Dmd	1964	0.375	0.1742	Yes
19	Dapk2	1967	0.374	0.1857	Yes
20	Sptan1	2003	0.372	0.1954	Yes
21	Dtna	2064	0.368	0.2036	Yes
22	Bhlhe40	2110	0.363	0.2124	Yes
23	Bin1	2203	0.353	0.2184	Yes
24	Sparc	2226	0.352	0.2281	Yes
25	Pick1	2235	0.351	0.2386	Yes
26	App	2240	0.350	0.2493	Yes
27	Slc6a8	2271	0.346	0.2584	Yes
28	Kcnh1	2384	0.338	0.2628	Yes
29	Hdac5	2411	0.337	0.2719	Yes
30	Tagln	2428	0.336	0.2815	Yes
31	Tpd52l1	2459	0.335	0.2902	Yes
32	Plxnb2	2623	0.321	0.2913	Yes
33	Foxo4	2641	0.319	0.3003	Yes
34	Myl6b	3153	0.288	0.2813	Yes
35	Nav2	3225	0.283	0.2862	Yes
36	Gaa	3330	0.275	0.2891	Yes
37	Sh2b1	3459	0.267	0.2904	Yes
38	Pfkm	3560	0.260	0.2930	Yes
39	Syngr2	3624	0.256	0.2976	Yes
40	Sirt2	3965	0.238	0.2863	Yes
41	Acsl1	4068	0.231	0.2880	Yes
42	Lsp1	4163	0.226	0.2899	Yes
43	Ncam1	4296	0.217	0.2894	Yes
44	Tsc2	4316	0.216	0.2951	Yes
45	Fgf2	4337	0.215	0.3007	Yes
46	Myh9	4633	0.201	0.2908	No
47	Vipr1	4997	0.183	0.2766	No
48	Mapre3	5193	0.174	0.2714	No
49	Cryab	5279	0.169	0.2720	No
50	Pde4dip	5320	0.167	0.2750	No
51	Agl	5451	0.161	0.2729	No
52	Mef2a	5510	0.157	0.2746	No
53	Ablim1	5524	0.157	0.2788	No
54	Tnnc1	5834	0.144	0.2664	No
55	Camk2b	6233	0.127	0.2485	No
56	Sphk1	6328	0.122	0.2472	No
57	Itgb1	6416	0.119	0.2461	No
58	Fxyd1	6461	0.117	0.2474	No
59	Mylk	6593	0.111	0.2437	No
60	Ryr1	6844	0.099	0.2331	No
61	Akt2	6855	0.099	0.2356	No
62	Itgb5	7010	0.092	0.2301	No
63	Agrn	7084	0.090	0.2289	No
64	Gabarapl2	7115	0.088	0.2300	No
65	Notch1	7327	0.084	0.2210	No
66	Tnnt3	7351	0.083	0.2223	No
67	Col4a2	7352	0.083	0.2249	No
68	Mybpc3	7717	0.068	0.2071	No
69	Psen2	7760	0.066	0.2069	No
70	Pcx	7907	0.061	0.2008	No
71	Atp2a1	7994	0.058	0.1979	No
72	Pygm	8450	0.038	0.1742	No
73	Crat	8555	0.034	0.1695	No
74	Igfbp7	8655	0.030	0.1650	No
75	Tgfb1	8671	0.029	0.1651	No
76	Ppfia4	8839	0.023	0.1567	No
77	Ptp4a3	8961	0.019	0.1507	No
78	Sorbs3	9137	0.012	0.1415	No
79	Flii	10226	-0.024	0.0827	No
80	Myom1	10318	-0.028	0.0786	No
81	Myh11	10699	-0.043	0.0591	No
82	Sh3bgr	10702	-0.043	0.0603	No
83	Mef2c	10900	-0.050	0.0511	No
84	Ckb	11040	-0.054	0.0452	No
85	Cdh13	11193	-0.060	0.0387	No
86	Tpm2	11228	-0.061	0.0388	No
87	Pkia	11646	-0.077	0.0183	No
88	Tnnt1	11774	-0.082	0.0139	No
89	Sorbs1	11812	-0.083	0.0145	No
90	Itgb4	11860	-0.085	0.0146	No
91	Rb1	11982	-0.090	0.0108	No
92	Adcy9	12036	-0.092	0.0107	No
93	Tpm3	12265	-0.101	0.0014	No
94	Eif4a2	12343	-0.104	0.0004	No
95	Lama2	12449	-0.109	-0.0019	No
96	Svil	12501	-0.111	-0.0013	No
97	Reep1	12631	-0.116	-0.0047	No
98	Klf5	12720	-0.120	-0.0058	No
99	Tnni2	12921	-0.129	-0.0127	No
100	Nos1	12932	-0.130	-0.0092	No
101	Mef2d	13157	-0.139	-0.0171	No
102	Cd36	13241	-0.143	-0.0172	No
103	Sgcd	13276	-0.144	-0.0146	No
104	Cox6a2	13946	-0.175	-0.0457	No
105	Mras	14123	-0.185	-0.0496	No
106	Eno3	14350	-0.196	-0.0559	No
107	Large1	14357	-0.197	-0.0501	No
108	Tead4	14523	-0.205	-0.0527	No
109	Gadd45b	14602	-0.207	-0.0505	No
110	Ocel1	14739	-0.215	-0.0513	No
111	Col1a1	15074	-0.235	-0.0622	No
112	Tnni1	15187	-0.239	-0.0609	No
113	Speg	15208	-0.240	-0.0546	No
114	Actn2	15219	-0.241	-0.0476	No
115	Bag1	15302	-0.246	-0.0444	No
116	Dmpk	15681	-0.272	-0.0566	No
117	Ifrd1	15782	-0.278	-0.0535	No
118	Myo1c	15784	-0.278	-0.0449	No
119	Lpin1	15904	-0.287	-0.0424	No
120	Myog	15989	-0.293	-0.0379	No
121	Fkbp1b	16197	-0.307	-0.0397	No
122	Cdkn1a	16347	-0.318	-0.0379	No
123	Atp6ap1	16495	-0.330	-0.0357	No
124	Mylpf	16633	-0.341	-0.0326	No
125	Col15a1	17337	-0.416	-0.0581	No
126	Chrnb1	17378	-0.421	-0.0472	No
127	Gja5	17528	-0.445	-0.0415	No
128	Pdlim7	17920	-0.519	-0.0468	No
129	Nqo1	18011	-0.541	-0.0349	No
130	Hbegf	18043	-0.551	-0.0194	No
131	Schip1	18156	-0.598	-0.0069	No
132	Myl4	18257	-0.663	0.0083	No