DatasetCLP.Basophil_Pheno.cls
#Group3_versus_Group4.Basophil_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeBasophil_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.26067558
Normalized Enrichment Score (NES)-0.93658584
Nominal p-value0.48727983
FDR q-value0.9327335
FWER p-Value0.996
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Il2rb870.8620.0203No
2Cd384760.6100.0168No
3Gch111050.477-0.0037No
4Il712680.4510.0006No
5Tnfaip314060.4370.0058No
6Il1515690.4160.0090No
7Rigi16390.4070.0171No
8Fcgr117880.3920.0204No
9Tapbp18090.3900.0307No
10Cxcl1023590.3390.0104No
11Sod226660.3170.0029No
12Cd6926920.3160.0107No
13Fas27290.3130.0179No
14Mvp27490.3120.0259No
15Nfkbia29390.2980.0242No
16Batf229870.2960.0303No
17Ciita31080.2910.0322No
18Dhx5831510.2880.0383No
19Bank131720.2870.0455No
20Bpgm33460.2740.0440No
21Cd7434150.2690.0481No
22Nup9335260.2630.0498No
23Il10ra35510.2610.0561No
24Pfkp37840.2470.0505No
25St3gal538830.2430.0522No
26Sppl2a40230.2350.0515No
27Icam140780.2310.0552No
28Trim2641880.2240.0558No
29Samd9l42620.2190.0582No
30Vamp543060.2160.0621No
31Trafd146130.2020.0512No
32Gpr1846760.1990.0536No
33Hif1a47920.1930.0529No
34Peli150940.1780.0416No
35Irf453390.1660.0330No
36Tdrd753980.1630.0346No
37Jak254770.1590.0350No
38Lap355460.1560.0358No
39Psmb257630.1460.0282No
40Adar58910.1420.0254No
41Rbck159300.1400.0274No
42Lats259550.1390.0301No
43Cd8664000.1200.0092No
44Ripk164330.1180.0109No
45H2-Aa68100.101-0.0067No
46Nfkb168780.098-0.0076No
47Irf172170.087-0.0236No
48Rnf3172730.086-0.0241No
49Selp72950.085-0.0227No
50Slc25a2873060.085-0.0208No
51Psme273480.083-0.0207No
52Ncoa373710.082-0.0195No
53Tor1b76700.070-0.0338No
54Sri76850.069-0.0326No
55Cmpk277560.066-0.0345No
56Parp1278350.064-0.0369No
57Irf279040.061-0.0388No
58Usp1879630.060-0.0403No
59Tnfsf1079910.059-0.0401No
60Vamp881880.050-0.0493No
61Casp183650.042-0.0578No
62Pnp84420.039-0.0608No
63Casp485720.033-0.0669No
64Herc686000.032-0.0674No
65Psma386440.030-0.0689No
66Slamf791940.010-0.0987No
67Itgb793560.004-0.1074No
68Il15ra94310.002-0.1114No
69Oas294490.001-0.1123No
70Ifnar29622-0.003-0.1217No
71Socs39818-0.011-0.1321No
72Pde4b9829-0.011-0.1323No
73Mthfd29848-0.012-0.1329No
74Eif2ak29919-0.014-0.1364No
75Casp39943-0.015-0.1372No
76Auts210010-0.017-0.1403No
77Irf810040-0.018-0.1414No
78Samhd110144-0.022-0.1464No
79Casp810219-0.024-0.1498No
80Ptpn610291-0.027-0.1529No
81Cd27410460-0.034-0.1611No
82Ifi3010660-0.041-0.1708No
83Rapgef610759-0.045-0.1748No
84St8sia410791-0.046-0.1752No
85Ifit210796-0.046-0.1741No
86Tap110831-0.047-0.1746No
87Arid5b10847-0.048-0.1740No
88Nod110914-0.050-0.1761No
89Ifitm210930-0.051-0.1755No
90Cmklr110942-0.051-0.1746No
91Ly6e10973-0.052-0.1747No
92Fgl211024-0.054-0.1759No
93Ddx6011076-0.055-0.1771No
94Trim2111374-0.067-0.1914No
95Ifi2711410-0.068-0.1914No
96Helz211483-0.070-0.1933No
97B2m11744-0.081-0.2052No
98Oas311819-0.084-0.2068No
99Pnpt111847-0.084-0.2058No
100Ccl511848-0.084-0.2034No
101Cfb12018-0.092-0.2100No
102Isoc112094-0.094-0.2113No
103Psma212106-0.095-0.2092No
104Trim1412703-0.119-0.2384No
105Ifit312975-0.131-0.2494No
106Stat413000-0.132-0.2469No
107Psme113043-0.134-0.2453No
108Wars113108-0.137-0.2448No
109Stat213215-0.142-0.2465No
110Btg113249-0.143-0.2441No
111Trim2513293-0.145-0.2422No
112Lcp213342-0.147-0.2406No
113Il4ra13358-0.148-0.2371No
114Txnip13636-0.161-0.2476No
115Irf513684-0.163-0.2454No
116Lysmd213963-0.176-0.2555Yes
117Sp11013976-0.177-0.2511Yes
118Plscr113986-0.177-0.2464Yes
119Ifi3514054-0.181-0.2448Yes
120Epsti114154-0.186-0.2448Yes
121Ptpn214205-0.189-0.2420Yes
122Psmb914285-0.193-0.2407Yes
123Psmb1014384-0.198-0.2403Yes
124Vcam114397-0.199-0.2352Yes
125H2-DMa14411-0.200-0.2301Yes
126Isg1514424-0.200-0.2249Yes
127Rnf21314476-0.203-0.2218Yes
128Ptpn114747-0.215-0.2303Yes
129Stat314771-0.216-0.2253Yes
130Ifih114897-0.224-0.2256Yes
131Rsad214902-0.225-0.2193Yes
132Gbp315151-0.236-0.2260Yes
133Pla2g4a15216-0.241-0.2225Yes
134Mx215368-0.251-0.2235Yes
135P2ry1415384-0.252-0.2170Yes
136Stat115458-0.256-0.2135Yes
137Znfx115553-0.263-0.2110Yes
138Rtp415610-0.267-0.2063Yes
139Irf915645-0.270-0.2003Yes
140Marchf115836-0.282-0.2025Yes
141Ripk215979-0.292-0.2018Yes
142Myd8816120-0.303-0.2006Yes
143Isg2016206-0.308-0.1963Yes
144Parp1416288-0.312-0.1917Yes
145Cdkn1a16347-0.318-0.1856Yes
146Pim116374-0.320-0.1777Yes
147Tnfaip216414-0.323-0.1704Yes
148Ifitm316464-0.328-0.1636Yes
149Casp716553-0.335-0.1586Yes
150Lgals3bp16749-0.351-0.1591Yes
151Pml16828-0.358-0.1530Yes
152Ube2l616956-0.368-0.1492Yes
153Nampt16965-0.369-0.1389Yes
154Irf716979-0.372-0.1288Yes
155Bst217051-0.380-0.1216Yes
156Zbp117144-0.393-0.1152Yes
157Ogfr17215-0.402-0.1073Yes
158Nlrc517231-0.404-0.0964Yes
159Oasl117283-0.410-0.0873Yes
160Ifi4417349-0.418-0.0787Yes
161Cmtr117539-0.447-0.0760Yes
162Xaf117807-0.494-0.0763Yes
163Arl4a17869-0.509-0.0648Yes
164Psmb817992-0.536-0.0558Yes
165Nmi18013-0.541-0.0412Yes
166Eif4e318169-0.605-0.0321Yes
167Il18bp18320-0.762-0.0181Yes
168Socs118332-0.7850.0042Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE