Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	CLP.Basophil_Pheno.cls #Group3_versus_Group4.Basophil_Pheno.cls #Group3_versus_Group4_repos
Phenotype	Basophil_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.20425265
Normalized Enrichment Score (NES)	-0.86072993
Nominal p-value	0.68443495
FDR q-value	0.99291265
FWER p-Value	0.999

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Taf12	203	0.743	0.0115	No
2	Surf1	217	0.735	0.0332	No
3	Cox17	453	0.618	0.0391	No
4	Pde6g	461	0.615	0.0575	No
5	Gsdme	535	0.589	0.0714	No
6	Npr2	635	0.563	0.0831	No
7	Ak1	720	0.546	0.0952	No
8	Rrm2b	915	0.507	0.1000	No
9	Rala	1027	0.488	0.1088	No
10	Ercc3	1779	0.393	0.0796	No
11	Nme4	2088	0.366	0.0739	No
12	Taf1c	2155	0.359	0.0813	No
13	Gtf2h5	2208	0.352	0.0891	No
14	Polr2g	2269	0.346	0.0964	No
15	Zfp707	2302	0.344	0.1051	No
16	Ercc8	2375	0.338	0.1115	No
17	Gtf2a2	2575	0.325	0.1105	No
18	Stx3	3051	0.294	0.0935	No
19	Pold4	3139	0.289	0.0975	No
20	Mpg	3174	0.287	0.1044	No
21	Guk1	3247	0.281	0.1090	No
22	Polh	3435	0.268	0.1069	No
23	Sf3a3	3522	0.264	0.1103	No
24	Xpc	3748	0.249	0.1055	No
25	Supt4a	3752	0.249	0.1129	No
26	Srsf6	3800	0.246	0.1179	No
27	Tk2	4059	0.232	0.1108	No
28	Gtf2f1	4113	0.228	0.1149	No
29	Alyref	4118	0.228	0.1216	No
30	Polr3c	4259	0.220	0.1206	No
31	Gtf2h3	4295	0.217	0.1253	No
32	Nme3	4349	0.214	0.1289	No
33	Smad5	4404	0.213	0.1324	No
34	Polr1d	4434	0.211	0.1373	No
35	Nt5c3	4605	0.203	0.1342	No
36	Dad1	4663	0.200	0.1371	No
37	Polr3gl	4798	0.192	0.1356	No
38	Zwint	4835	0.190	0.1395	No
39	Cetn2	4995	0.183	0.1363	No
40	Polr2c	5267	0.170	0.1267	No
41	Clp1	5593	0.153	0.1135	No
42	Aprt	5685	0.149	0.1131	No
43	Polr2h	5796	0.145	0.1115	No
44	Brf2	5992	0.137	0.1050	No
45	Ada	6084	0.133	0.1041	No
46	Tarbp2	6408	0.119	0.0900	No
47	Polr2a	6423	0.119	0.0928	No
48	Rae1	6704	0.107	0.0808	No
49	Arl6ip1	6839	0.100	0.0765	No
50	Bcam	6916	0.097	0.0753	No
51	Mrpl40	6986	0.094	0.0743	No
52	Aaas	7049	0.091	0.0737	No
53	Dgcr8	7144	0.087	0.0712	No
54	Nfx1	7275	0.086	0.0667	No
55	Poll	7447	0.079	0.0597	No
56	Dctn4	7518	0.076	0.0582	No
57	Ncbp2	7628	0.071	0.0544	No
58	Polr2i	7705	0.068	0.0523	No
59	Cmpk2	7756	0.066	0.0516	No
60	Pnp	8442	0.039	0.0153	No
61	Vps37b	8512	0.036	0.0126	No
62	Ak3	8622	0.031	0.0076	No
63	Taf9	8666	0.029	0.0061	No
64	Taf13	9003	0.017	-0.0118	No
65	Edf1	9350	0.004	-0.0306	No
66	Bcap31	9398	0.003	-0.0331	No
67	Eif1b	9638	-0.004	-0.0461	No
68	Adrm1	9649	-0.004	-0.0465	No
69	Supt5	9676	-0.005	-0.0477	No
70	Pde4b	9829	-0.011	-0.0557	No
71	Nelfb	9855	-0.012	-0.0567	No
72	Ercc2	10203	-0.024	-0.0750	No
73	Nelfe	10227	-0.024	-0.0755	No
74	Ssrp1	10249	-0.026	-0.0759	No
75	Polr2d	10632	-0.040	-0.0956	No
76	Sac3d1	10829	-0.047	-0.1049	No
77	Pom121	10958	-0.052	-0.1103	No
78	Pold1	11389	-0.067	-0.1318	No
79	Gmpr2	11392	-0.067	-0.1299	No
80	Nudt9	11397	-0.067	-0.1281	No
81	Vps28	11404	-0.067	-0.1263	No
82	Snapc4	11452	-0.069	-0.1268	No
83	Polr2f	11676	-0.078	-0.1366	No
84	Upf3b	12230	-0.100	-0.1639	No
85	Rfc2	12300	-0.103	-0.1645	No
86	Polr2j	12340	-0.104	-0.1635	No
87	Polr2k	12473	-0.110	-0.1674	No
88	Eloa	12475	-0.110	-0.1641	No
89	Trp53	12516	-0.112	-0.1629	No
90	Usp11	12570	-0.114	-0.1623	No
91	Polb	12739	-0.121	-0.1678	No
92	Lig1	12978	-0.131	-0.1769	No
93	Cstf3	13066	-0.135	-0.1775	No
94	Ercc4	13151	-0.139	-0.1779	No
95	Itpa	13206	-0.142	-0.1765	No
96	Ell	13419	-0.150	-0.1836	No
97	Gtf3c5	13421	-0.150	-0.1790	No
98	Gtf2h1	13430	-0.151	-0.1749	No
99	Impdh2	13441	-0.151	-0.1708	No
100	Cant1	13453	-0.152	-0.1668	No
101	Rfc3	13504	-0.155	-0.1649	No
102	Sdcbp	13624	-0.160	-0.1665	No
103	Ddb1	13750	-0.166	-0.1683	No
104	Adcy6	13877	-0.172	-0.1699	No
105	Ercc5	13925	-0.174	-0.1672	No
106	Rnmt	14059	-0.181	-0.1689	No
107	Pold3	14691	-0.212	-0.1970	Yes
108	Taf6	14764	-0.216	-0.1944	Yes
109	Rev3l	14788	-0.217	-0.1890	Yes
110	Ago4	14848	-0.221	-0.1855	Yes
111	Nt5c	14926	-0.226	-0.1828	Yes
112	Tsg101	15318	-0.247	-0.1967	Yes
113	Rpa3	15396	-0.253	-0.1932	Yes
114	Hcls1	15446	-0.254	-0.1882	Yes
115	Umps	15503	-0.259	-0.1833	Yes
116	Polr1h	15541	-0.262	-0.1774	Yes
117	Rfc5	15571	-0.264	-0.1709	Yes
118	Ercc1	15747	-0.275	-0.1721	Yes
119	Rad51	16176	-0.306	-0.1862	Yes
120	Rad52	16278	-0.312	-0.1823	Yes
121	Rpa2	16320	-0.315	-0.1749	Yes
122	Gtf2b	16365	-0.319	-0.1676	Yes
123	Pola2	16379	-0.320	-0.1586	Yes
124	Pole4	16474	-0.329	-0.1537	Yes
125	Rbx1	16509	-0.331	-0.1455	Yes
126	Nme1	16575	-0.337	-0.1388	Yes
127	Pola1	16860	-0.359	-0.1434	Yes
128	Fen1	16861	-0.359	-0.1325	Yes
129	Polr1c	16878	-0.361	-0.1223	Yes
130	Snapc5	16919	-0.365	-0.1134	Yes
131	Mpc2	16952	-0.368	-0.1039	Yes
132	Polr2e	17060	-0.382	-0.0982	Yes
133	Dut	17065	-0.382	-0.0868	Yes
134	Rfc4	17150	-0.393	-0.0794	Yes
135	Nelfcd	17402	-0.424	-0.0802	Yes
136	Dguok	17531	-0.445	-0.0737	Yes
137	Gpx4	17543	-0.447	-0.0606	Yes
138	Tyms	17672	-0.471	-0.0533	Yes
139	Pcna	17694	-0.473	-0.0401	Yes
140	Taf10	17762	-0.484	-0.0290	Yes
141	Sec61a1	17784	-0.489	-0.0152	Yes
142	Prim1	17905	-0.517	-0.0061	Yes
143	Ddb2	17929	-0.520	0.0085	Yes
144	Nudt21	18112	-0.579	0.0162	Yes