Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	CLP.Basophil_Pheno.cls #Group3_versus_Group4.Basophil_Pheno.cls #Group3_versus_Group4_repos
Phenotype	Basophil_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	2
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	0.24601753
Normalized Enrichment Score (NES)	1.0310811
Nominal p-value	0.3972332
FDR q-value	0.8072146
FWER p-Value	0.984

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Il2rb	87	0.862	0.0226	Yes
2	Degs1	176	0.761	0.0419	Yes
3	Ccr1	369	0.653	0.0521	Yes
4	Apbb1	472	0.611	0.0659	Yes
5	Itk	498	0.601	0.0836	Yes
6	Ltb	694	0.552	0.0905	Yes
7	Ifngr2	756	0.539	0.1042	Yes
8	Thy1	762	0.536	0.1210	Yes
9	C2	968	0.494	0.1254	Yes
10	Ache	969	0.494	0.1411	Yes
11	Pf4	1176	0.466	0.1446	Yes
12	Lck	1207	0.460	0.1575	Yes
13	Il7	1268	0.451	0.1686	Yes
14	Acvr2a	1416	0.436	0.1744	Yes
15	Il15	1569	0.416	0.1792	Yes
16	Tapbp	1809	0.390	0.1785	Yes
17	Il27ra	1868	0.383	0.1875	Yes
18	Traf2	1949	0.376	0.1951	Yes
19	F2r	2076	0.368	0.1998	Yes
20	Tlr1	2172	0.357	0.2060	Yes
21	Il10	2255	0.348	0.2125	Yes
22	Rpl3l	2462	0.334	0.2119	Yes
23	Icosl	2570	0.326	0.2163	Yes
24	Cd1d2	2600	0.323	0.2250	Yes
25	Capg	2651	0.318	0.2324	Yes
26	Fas	2729	0.313	0.2381	Yes
27	Csf1	2832	0.307	0.2422	Yes
28	Was	3080	0.293	0.2380	Yes
29	Cfp	3178	0.287	0.2418	Yes
30	Gpr65	3406	0.269	0.2379	Yes
31	Cd74	3415	0.269	0.2460	Yes
32	Prkcb	4073	0.231	0.2174	No
33	Icam1	4078	0.231	0.2245	No
34	H2-Oa	4138	0.227	0.2285	No
35	Cd96	4418	0.212	0.2199	No
36	Elane	4574	0.204	0.2179	No
37	Tpd52	4594	0.203	0.2233	No
38	Hif1a	4792	0.193	0.2186	No
39	H2-Ob	4958	0.184	0.2155	No
40	Il4	5261	0.170	0.2043	No
41	Galnt1	5325	0.167	0.2062	No
42	Igsf6	5330	0.166	0.2112	No
43	Irf4	5339	0.166	0.2160	No
44	Ly75	5358	0.165	0.2203	No
45	Jak2	5477	0.159	0.2189	No
46	Fgr	5683	0.150	0.2124	No
47	Ptprc	6206	0.128	0.1879	No
48	Flna	6265	0.125	0.1887	No
49	Socs5	6358	0.121	0.1875	No
50	Cd86	6400	0.120	0.1890	No
51	Ets1	6779	0.102	0.1716	No
52	Tlr2	6785	0.102	0.1745	No
53	H2-Aa	6810	0.101	0.1764	No
54	Ifngr1	6814	0.101	0.1795	No
55	Csk	6871	0.098	0.1795	No
56	Cd47	7107	0.089	0.1695	No
57	Crtam	7162	0.087	0.1693	No
58	Spi1	7259	0.086	0.1668	No
59	Il2rg	7270	0.086	0.1689	No
60	Ccr2	7498	0.077	0.1589	No
61	Ube2d1	7558	0.074	0.1581	No
62	Tlr6	7614	0.072	0.1573	No
63	Glmn	7619	0.072	0.1594	No
64	Map4k1	7800	0.065	0.1516	No
65	Il12a	7983	0.059	0.1435	No
66	Ube2n	8137	0.052	0.1368	No
67	Klrd1	8159	0.051	0.1372	No
68	Bcat1	8357	0.043	0.1278	No
69	Abi1	8509	0.036	0.1207	No
70	Tgfb1	8671	0.029	0.1128	No
71	Stab1	8927	0.020	0.0995	No
72	Akt1	9011	0.016	0.0955	No
73	Cd7	9281	0.007	0.0809	No
74	Dyrk3	9587	-0.002	0.0643	No
75	Ifnar2	9622	-0.003	0.0625	No
76	Mrpl3	9636	-0.003	0.0619	No
77	Cd28	9706	-0.006	0.0583	No
78	Gcnt1	9921	-0.014	0.0471	No
79	Cd247	10017	-0.018	0.0424	No
80	Irf8	10040	-0.018	0.0418	No
81	Ptpn6	10291	-0.027	0.0290	No
82	Rps9	10343	-0.029	0.0271	No
83	Mtif2	10394	-0.031	0.0254	No
84	Cd80	10443	-0.033	0.0238	No
85	St8sia4	10791	-0.046	0.0063	No
86	Cd79a	10811	-0.047	0.0067	No
87	Tap1	10831	-0.047	0.0072	No
88	Il18rap	10920	-0.051	0.0039	No
89	Tnf	11000	-0.053	0.0013	No
90	Bcl10	11012	-0.053	0.0024	No
91	Hdac9	11112	-0.056	-0.0012	No
92	Bcl3	11240	-0.062	-0.0062	No
93	Itgb2	11357	-0.066	-0.0105	No
94	Abce1	11690	-0.078	-0.0262	No
95	B2m	11744	-0.081	-0.0265	No
96	Ccr5	11763	-0.082	-0.0249	No
97	Ccl5	11848	-0.084	-0.0269	No
98	Ccnd2	12146	-0.096	-0.0401	No
99	Srgn	12283	-0.102	-0.0443	No
100	Cdkn2a	12335	-0.104	-0.0438	No
101	Tgfb2	12366	-0.105	-0.0421	No
102	Eif4g3	12379	-0.106	-0.0394	No
103	H2-DMb2	12444	-0.108	-0.0394	No
104	Ctss	12533	-0.112	-0.0407	No
105	Ncf4	12606	-0.115	-0.0410	No
106	Prkcg	12870	-0.126	-0.0514	No
107	Npm1	12935	-0.130	-0.0507	No
108	Stat4	13000	-0.132	-0.0501	No
109	Itgal	13037	-0.134	-0.0478	No
110	Wars1	13108	-0.137	-0.0473	No
111	Map3k7	13286	-0.145	-0.0524	No
112	Lcp2	13342	-0.147	-0.0507	No
113	Il4ra	13358	-0.148	-0.0468	No
114	Nck1	13781	-0.168	-0.0646	No
115	Eif3a	13854	-0.171	-0.0631	No
116	Elf4	13868	-0.172	-0.0584	No
117	Il16	13975	-0.177	-0.0586	No
118	Il12rb1	14188	-0.188	-0.0642	No
119	Psmb10	14384	-0.198	-0.0686	No
120	H2-DMa	14411	-0.200	-0.0637	No
121	Trat1	14456	-0.202	-0.0597	No
122	Ikbkb	14571	-0.206	-0.0594	No
123	Rps3a1	14934	-0.227	-0.0721	No
124	Egfr	15079	-0.235	-0.0725	No
125	Ccnd3	15217	-0.241	-0.0723	No
126	Fasl	15271	-0.245	-0.0675	No
127	Hcls1	15446	-0.254	-0.0689	No
128	Tap2	15454	-0.255	-0.0612	No
129	Stat1	15458	-0.256	-0.0533	No
130	Zap70	15621	-0.268	-0.0536	No
131	Il18	15848	-0.283	-0.0570	No
132	Ripk2	15979	-0.292	-0.0549	No
133	Il11	16119	-0.303	-0.0529	No
134	Fcgr2b	16204	-0.308	-0.0477	No
135	Tlr3	16295	-0.313	-0.0427	No
136	Eif5a	16467	-0.328	-0.0416	No
137	Rpl9	16484	-0.329	-0.0321	No
138	Nme1	16575	-0.337	-0.0263	No
139	Eif3d	16703	-0.347	-0.0223	No
140	Nlrp3	16777	-0.352	-0.0151	No
141	Lyn	16778	-0.352	-0.0039	No
142	Irf7	16979	-0.372	-0.0031	No
143	Cd4	17095	-0.387	0.0029	No
144	Ly86	17172	-0.395	0.0113	No
145	Eif3j1	17781	-0.489	-0.0065	No
146	Brca1	17826	-0.499	0.0069	No
147	Socs1	18332	-0.785	0.0042	No