Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	CLP.Basophil_Pheno.cls #Group2_versus_Group3.Basophil_Pheno.cls #Group2_versus_Group3_repos
Phenotype	Basophil_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_MYOGENESIS
Enrichment Score (ES)	-0.21675399
Normalized Enrichment Score (NES)	-0.90308183
Nominal p-value	0.654321
FDR q-value	0.80844754
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Flii	520	0.530	-0.0109	No
2	Schip1	689	0.486	-0.0040	No
3	Tnnc1	708	0.484	0.0111	No
4	Cd36	782	0.472	0.0227	No
5	Sgcd	825	0.466	0.0359	No
6	Pdlim7	1426	0.387	0.0159	No
7	Plxnb2	1453	0.384	0.0272	No
8	Camk2b	1499	0.380	0.0373	No
9	Agrn	1510	0.379	0.0493	No
10	Pkia	1531	0.377	0.0607	No
11	Eif4a2	1663	0.364	0.0656	No
12	Dmd	2021	0.332	0.0571	No
13	Tead4	2163	0.323	0.0600	No
14	Bag1	2236	0.318	0.0666	No
15	Eno3	2383	0.306	0.0688	No
16	Myog	2405	0.305	0.0778	No
17	Cox7a1	2442	0.302	0.0858	No
18	Ache	2599	0.290	0.0869	No
19	Gabarapl2	2712	0.281	0.0900	No
20	Sptan1	2871	0.271	0.0904	No
21	Gadd45b	3001	0.260	0.0919	No
22	Itgb4	3326	0.239	0.0821	No
23	Sh3bgr	3408	0.234	0.0854	No
24	Cdkn1a	3579	0.224	0.0835	No
25	Myh9	3707	0.216	0.0837	No
26	Pick1	3848	0.209	0.0830	No
27	Erbb3	4049	0.197	0.0786	No
28	Itgb1	4100	0.194	0.0822	No
29	Cryab	4412	0.177	0.0711	No
30	Tagln	4596	0.169	0.0667	No
31	Fxyd1	4692	0.164	0.0669	No
32	Svil	4725	0.163	0.0706	No
33	Lsp1	4786	0.160	0.0726	No
34	Col15a1	4932	0.154	0.0698	No
35	Psen2	5052	0.149	0.0682	No
36	Ak1	5081	0.147	0.0715	No
37	Pfkm	5247	0.139	0.0671	No
38	Tnni2	5275	0.138	0.0702	No
39	Prnp	5605	0.123	0.0563	No
40	Col4a2	5649	0.121	0.0579	No
41	Bhlhe40	5651	0.120	0.0619	No
42	Klf5	5657	0.120	0.0656	No
43	Fdps	5700	0.117	0.0672	No
44	Fkbp1b	5953	0.106	0.0569	No
45	Cdh13	6022	0.103	0.0566	No
46	Tpm3	6437	0.086	0.0368	No
47	Nos1	6460	0.084	0.0384	No
48	Myo1c	6822	0.070	0.0209	No
49	Lama2	7123	0.057	0.0064	No
50	Mylk	7142	0.056	0.0072	No
51	Sirt2	7252	0.052	0.0030	No
52	Gja5	7644	0.033	-0.0173	No
53	Hbegf	7677	0.032	-0.0180	No
54	Dtna	7690	0.032	-0.0176	No
55	Foxo4	7698	0.031	-0.0170	No
56	Large1	7782	0.027	-0.0206	No
57	Ckb	8028	0.017	-0.0334	No
58	Fgf2	8340	0.004	-0.0503	No
59	Adcy9	8535	-0.003	-0.0608	No
60	Pde4dip	8949	-0.020	-0.0828	No
61	Rb1	9285	-0.034	-0.1000	No
62	Lpin1	9301	-0.035	-0.0996	No
63	Myom1	9391	-0.039	-0.1032	No
64	Ptp4a3	9410	-0.040	-0.1029	No
65	Speg	9459	-0.041	-0.1041	No
66	Ablim1	9462	-0.041	-0.1029	No
67	Dmpk	9467	-0.041	-0.1017	No
68	Myl4	9612	-0.047	-0.1080	No
69	Sphk1	9821	-0.056	-0.1176	No
70	App	9913	-0.060	-0.1206	No
71	Cox6a2	10075	-0.067	-0.1272	No
72	Hdac5	10475	-0.085	-0.1462	No
73	Col1a1	10519	-0.087	-0.1456	No
74	Mef2a	10728	-0.096	-0.1539	No
75	Ifrd1	10949	-0.105	-0.1624	No
76	Tnnt1	11094	-0.111	-0.1666	No
77	Mef2c	11546	-0.132	-0.1869	No
78	Tpd52l1	11632	-0.135	-0.1871	No
79	Ppfia4	11857	-0.145	-0.1945	No
80	Agl	11928	-0.149	-0.1934	No
81	Tsc2	12151	-0.158	-0.2003	No
82	Mef2d	12267	-0.164	-0.2012	No
83	Reep1	12270	-0.164	-0.1959	No
84	Akt2	12337	-0.168	-0.1939	No
85	Gaa	12361	-0.170	-0.1895	No
86	Acsl1	12522	-0.177	-0.1924	No
87	Notch1	12614	-0.182	-0.1914	No
88	Myh11	12650	-0.184	-0.1872	No
89	Sorbs3	13010	-0.203	-0.2001	No
90	Igfbp7	13120	-0.209	-0.1992	No
91	Pygm	13150	-0.210	-0.1938	No
92	Mras	13570	-0.231	-0.2091	Yes
93	Atp6ap1	13594	-0.232	-0.2027	Yes
94	Clu	13605	-0.232	-0.1955	Yes
95	Itgb5	13910	-0.248	-0.2039	Yes
96	Atp2a1	14004	-0.252	-0.2007	Yes
97	Ncam1	14024	-0.253	-0.1934	Yes
98	Crat	14094	-0.257	-0.1886	Yes
99	Syngr2	14144	-0.259	-0.1827	Yes
100	Sh2b1	14145	-0.259	-0.1742	Yes
101	Actn2	14170	-0.260	-0.1669	Yes
102	Myl6b	14239	-0.264	-0.1618	Yes
103	Tgfb1	14256	-0.265	-0.1539	Yes
104	Ocel1	14306	-0.268	-0.1477	Yes
105	Nqo1	14489	-0.280	-0.1484	Yes
106	Tnnt3	14517	-0.281	-0.1406	Yes
107	Vipr1	14529	-0.281	-0.1319	Yes
108	Chrnb1	14630	-0.286	-0.1279	Yes
109	Mylpf	14806	-0.296	-0.1276	Yes
110	Tnni1	15031	-0.311	-0.1296	Yes
111	Pcx	15103	-0.315	-0.1231	Yes
112	Sorbs1	15264	-0.326	-0.1210	Yes
113	Mapre3	15284	-0.327	-0.1112	Yes
114	Adam12	15385	-0.334	-0.1056	Yes
115	Kcnh1	15426	-0.338	-0.0966	Yes
116	Rit1	15527	-0.344	-0.0907	Yes
117	Smtn	15720	-0.358	-0.0893	Yes
118	Kifc3	15738	-0.359	-0.0784	Yes
119	Mybpc3	15927	-0.374	-0.0763	Yes
120	Tpm2	16072	-0.387	-0.0714	Yes
121	Csrp3	16145	-0.393	-0.0623	Yes
122	Fhl1	16186	-0.397	-0.0513	Yes
123	Slc6a8	16505	-0.425	-0.0546	Yes
124	Kcnh2	16621	-0.439	-0.0464	Yes
125	Nav2	16630	-0.440	-0.0323	Yes
126	Bin1	16671	-0.443	-0.0198	Yes
127	Sparc	16812	-0.458	-0.0122	Yes
128	Ryr1	17018	-0.478	-0.0076	Yes
129	Gsn	17034	-0.481	0.0075	Yes
130	Dapk2	17611	-0.567	-0.0052	Yes
131	Cnn3	18099	-0.703	-0.0086	Yes
132	Mapk12	18218	-0.768	0.0104	Yes