DatasetCLP.Basophil_Pheno.cls
#Group2_versus_Group3.Basophil_Pheno.cls
#Group2_versus_Group3_repos
PhenotypeBasophil_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class1
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)0.28254852
Normalized Enrichment Score (NES)1.021748
Nominal p-value0.44111776
FDR q-value0.88699543
FWER p-Value0.995
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Fas550.8100.0168Yes
2Zbp11330.7130.0301Yes
3Cmtr12230.6420.0409Yes
4Cmpk22570.6210.0543Yes
5Il4ra2620.6180.0693Yes
6Fgl23640.5720.0778Yes
7Rsad24460.5500.0868Yes
8Gbp35830.5140.0919Yes
9Ifih15910.5110.1041Yes
10Socs36800.4880.1112Yes
11Cd387450.4770.1194Yes
12Parp148720.4590.1237Yes
13Stat38940.4560.1338Yes
14Pnp9130.4540.1439Yes
15Myd889620.4440.1521Yes
16Vcam110570.4320.1576Yes
17Ifit311660.4170.1619Yes
18Isoc112220.4110.1689Yes
19Sp11012770.4040.1759Yes
20Lap313310.3970.1827Yes
21Il18bp13450.3950.1917Yes
22Ifit213670.3920.2001Yes
23Rnf21314470.3850.2052Yes
24Stat215690.3740.2077Yes
25Irf115930.3710.2156Yes
26Lysmd216640.3640.2207Yes
27Pim117120.3610.2269Yes
28Ptpn119150.3430.2243Yes
29Mx220120.3330.2272Yes
30Tdrd720860.3280.2312Yes
31Il10ra21180.3260.2375Yes
32Stat121250.3260.2451Yes
33Plscr121290.3250.2529Yes
34Samhd121700.3230.2587Yes
35Eif2ak223240.3120.2579Yes
36Pnpt124450.3010.2587Yes
37Ifi4426380.2870.2552Yes
38Xaf126500.2860.2616Yes
39Oas227260.2810.2644Yes
40Nup9329240.2660.2601Yes
41Pfkp29740.2620.2639Yes
42Oasl130980.2530.2633Yes
43Lcp231810.2480.2649Yes
44Irf732690.2430.2661Yes
45Ifi3033680.2360.2665Yes
46Ccl534030.2340.2704Yes
47Cdkn1a35790.2240.2663Yes
48Tnfsf1035990.2230.2707Yes
49Itgb737730.2130.2664Yes
50Sri37990.2110.2702Yes
51Bst238600.2080.2720Yes
52Znfx139100.2050.2744Yes
53Psmb239210.2050.2789Yes
54Casp439690.2010.2812Yes
55Eif4e341400.1920.2766Yes
56Ripk141880.1890.2786Yes
57Arid5b42160.1870.2818Yes
58Helz242850.1840.2825Yes
59Psme244560.1750.2775No
60Batf245850.1690.2747No
61Oas345920.1690.2785No
62Trim2547140.1630.2758No
63Cxcl1047490.1610.2779No
64Marchf147840.1600.2800No
65Irf948130.1590.2823No
66Lats250280.1500.2743No
67Casp350670.1480.2758No
68Ncoa351190.1460.2766No
69Pla2g4a51690.1430.2774No
70Mvp56370.1210.2548No
71Adar56650.1200.2563No
72Rnf3157100.1170.2567No
73Nampt58620.1100.2511No
74Casp158810.1090.2528No
75Nmi59390.1070.2523No
76Rigi61070.0990.2456No
77Selp61410.0980.2462No
78Pml61550.0970.2478No
79Trim2163680.0880.2384No
80Usp1866030.0780.2275No
81Ifitm366280.0770.2280No
82Trafd166430.0760.2291No
83Epsti166930.0740.2283No
84Ddx6067090.0740.2293No
85Isg1568080.0700.2256No
86Ptpn668260.0690.2264No
87Wars169310.0650.2223No
88Herc671360.0560.2125No
89Lgals3bp71560.0560.2128No
90Ube2l674910.0410.1955No
91Psmb875440.0380.1936No
92Tapbp76060.0360.1911No
93Nfkb176230.0340.1910No
94H2-Aa76250.0340.1918No
95Casp876990.0310.1886No
96Btg179410.0220.1759No
97Ly6e80990.0140.1676No
98Socs181970.0100.1626No
99Arl4a8503-0.0020.1459No
100Peli18549-0.0030.1435No
101Samd9l8585-0.0050.1417No
102Nlrc58692-0.0100.1361No
103Ptpn28749-0.0120.1334No
104Il78843-0.0150.1286No
105Casp78879-0.0170.1271No
106Hif1a9323-0.0360.1037No
107Jak29491-0.0420.0956No
108Psme19939-0.0610.0726No
109Psma39949-0.0610.0736No
110B2m10316-0.0770.0555No
111Isg2010541-0.0880.0453No
112Rapgef610622-0.0910.0432No
113Dhx5810724-0.0950.0400No
114Slamf710781-0.0980.0393No
115Parp1210833-0.1000.0389No
116St8sia410905-0.1040.0376No
117Mthfd211408-0.1250.0131No
118Cmklr111720-0.139-0.0005No
119Irf811722-0.1390.0028No
120Nod111782-0.1420.0031No
121Rbck111986-0.151-0.0043No
122Ifnar212029-0.153-0.0029No
123Pde4b12059-0.154-0.0007No
124Stat412072-0.1540.0024No
125Vamp512087-0.1550.0055No
126Il1512480-0.175-0.0117No
127Psmb1012670-0.185-0.0176No
128H2-DMa12731-0.187-0.0163No
129Icam112897-0.196-0.0205No
130Trim2613025-0.204-0.0225No
131Irf413317-0.217-0.0331No
132Tap113371-0.220-0.0306No
133P2ry1413396-0.222-0.0265No
134Ogfr13455-0.225-0.0242No
135Tnfaip313484-0.227-0.0201No
136Psma213552-0.230-0.0182No
137Ifi3513603-0.232-0.0152No
138Cd27413659-0.235-0.0125No
139Ifitm213759-0.240-0.0120No
140Bpgm13764-0.241-0.0063No
141Ripk213794-0.242-0.0020No
142Psmb914018-0.252-0.0080No
143Txnip14082-0.256-0.0052No
144Trim1414105-0.257-0.0001No
145Ciita14163-0.2600.0031No
146Sod214215-0.2630.0068No
147Cfb14234-0.2640.0122No
148Vamp814266-0.2660.0171No
149Slc25a2814267-0.2660.0236No
150Cd6914465-0.2780.0196No
151Sppl2a14525-0.2810.0232No
152Rtp414557-0.2830.0285No
153Auts214718-0.2920.0269No
154Tnfaip215298-0.3280.0032No
155Cd7415536-0.344-0.0014No
156Fcgr115623-0.3500.0025No
157Bank115898-0.372-0.0034No
158Ifi2715961-0.3760.0024No
159Irf216219-0.399-0.0019No
160Gpr1816326-0.4080.0023No
161Tor1b16572-0.433-0.0006No
162Nfkbia17009-0.478-0.0128No
163Gch117228-0.504-0.0124No
164Irf517330-0.518-0.0052No
165St3gal517343-0.5220.0069No
166Cd8617395-0.5310.0171No
167Il15ra18049-0.681-0.0020No
168Il2rb18319-0.8810.0049No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE