DatasetCLP.Basophil_Pheno.cls
#Group2_versus_Group3.Basophil_Pheno.cls
#Group2_versus_Group3_repos
PhenotypeBasophil_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class1
GeneSetHALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)0.34552518
Normalized Enrichment Score (NES)1.1992342
Nominal p-value0.34322035
FDR q-value0.7446062
FWER p-Value0.918
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_G2M_CHECKPOINT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Hspa8320.8710.0180Yes
2Rad54l610.7970.0346Yes
3Mcm3650.7930.0525Yes
4Cdc6800.7770.0694Yes
5Nasp1810.6770.0793Yes
6Kpnb11880.6710.0942Yes
7Mybl22420.6310.1057Yes
8Cdc25a2600.6190.1188Yes
9Prim23050.5970.1300Yes
10Mcm53530.5760.1405Yes
11Hnrnpu4280.5570.1491Yes
12Smc1a4470.5500.1606Yes
13Chaf1a5790.5150.1651Yes
14E2f26170.5020.1745Yes
15Mcm26280.4990.1853Yes
16Sap307070.4840.1920Yes
17Chek17120.4830.2027Yes
18Srsf17690.4740.2104Yes
19Lmnb17750.4730.2209Yes
20Mcm68780.4570.2257Yes
21Hnrnpd8820.4570.2359Yes
22Cdkn1b12810.4030.2233Yes
23Abl113030.4000.2312Yes
24Chmp1a15300.3770.2274Yes
25Hus115500.3750.2349Yes
26Nolc115510.3750.2434Yes
27E2f116180.3690.2482Yes
28Lbr17000.3610.2519Yes
29Ncl17470.3580.2575Yes
30Nsd217880.3550.2634Yes
31Exo117910.3550.2714Yes
32Pole18010.3530.2789Yes
33Sqle19070.3440.2810Yes
34Brca219310.3420.2875Yes
35Xpo120110.3330.2907Yes
36Dmd20210.3320.2978Yes
37Srsf1021470.3240.2983Yes
38H2bc1223660.3080.2933Yes
39Mtf223940.3060.2988Yes
40Tfdp124320.3020.3036Yes
41Snrpd125370.2950.3046Yes
42Prpf4b25690.2920.3096Yes
43E2f326490.2860.3117Yes
44Wrn26630.2860.3175Yes
45Stil28030.2750.3161Yes
46Amd129860.2610.3121Yes
47Rpa229910.2610.3178Yes
48Odc130080.2590.3228Yes
49Suv39h130410.2570.3269Yes
50Orc630720.2550.3310Yes
51Aurkb31010.2530.3352Yes
52Numa131080.2520.3406Yes
53Bard131240.2510.3455Yes
54Ss1832790.2430.3426No
55Pbk38620.2080.3154No
56Cul538690.2080.3198No
57Cdc4538780.2070.3240No
58Kif5b38880.2070.3282No
59Syncrip39850.2000.3275No
60Stag141150.1930.3248No
61Rad23b41270.1930.3286No
62Casp8ap241280.1930.3330No
63Polq42710.1850.3294No
64Arid4a43450.1810.3295No
65Top2a44050.1780.3303No
66Ccnt144370.1760.3326No
67Tmpo45330.1720.3313No
68Hira45360.1710.3351No
69Mad2l145380.1710.3389No
70Cul145690.1700.3411No
71Gspt146650.1650.3397No
72Kif2248360.1580.3339No
73Ezh248560.1570.3364No
74Top149170.1550.3367No
75Kif1149450.1540.3387No
76Pola249950.1520.3394No
77Notch250800.1480.3382No
78Cdk150840.1470.3414No
79Smarcc151700.1430.3400No
80Aurka53690.1330.3321No
81Upf154400.1300.3312No
82E2f454920.1280.3313No
83Sfpq55930.1230.3287No
84Cdc756100.1230.3306No
85Cdk456610.1200.3305No
86Uck256960.1170.3313No
87Dr157230.1160.3326No
88Ndc8058550.1100.3279No
89Tra2b59660.1060.3242No
90Ddx39a60030.1040.3246No
91Dkc160600.1010.3239No
92Ilf360650.1010.3259No
93Pafah1b160750.1000.3277No
94Pml61550.0970.3256No
95Gins261560.0970.3278No
96Kif1561770.0960.3289No
97Lig362800.0920.3254No
98Pttg165120.0820.3145No
99Smc265660.0790.3134No
100Cul365800.0790.3145No
101Stmn168120.0700.3034No
102Rasal269070.0660.2998No
103Ube2s69420.0650.2994No
104Smad369850.0630.2985No
105H2az169870.0630.2999No
106Bub169960.0630.3009No
107Efna570000.0630.3021No
108Atf572400.0520.2902No
109Odf274330.0430.2806No
110Slc38a174390.0430.2813No
111Pds5b74710.0410.2806No
112Rad2175800.0370.2755No
113Kif475810.0370.2763No
114Kmt5a75930.0360.2765No
115Cbx176930.0310.2718No
116Ttk77370.0290.2701No
117Racgap178080.0260.2668No
118Smc478110.0260.2673No
119Orc578450.0240.2660No
120Ctcf79870.0200.2587No
121Ythdc179890.0190.2591No
122Tnpo281050.0140.2531No
123Rbl181420.0120.2514No
124Cul4a81900.0100.2491No
125Cdc2783580.0040.2400No
126Atrx83940.0020.2381No
127Mnat18660-0.0080.2238No
128Bcl38671-0.0090.2234No
129Tpx28764-0.0120.2186No
130Nusap19115-0.0270.2000No
131Rps6ka59148-0.0280.1989No
132Tle39304-0.0350.1912No
133Incenp9318-0.0360.1913No
134Hif1a9323-0.0360.1919No
135Slc12a29366-0.0380.1905No
136Birc59402-0.0390.1895No
137Tent4a9730-0.0520.1727No
138Plk410008-0.0640.1589No
139Kif2c10072-0.0660.1570No
140Nup5010142-0.0700.1548No
141Fancc10270-0.0760.1495No
142Cenpe10423-0.0820.1431No
143Ewsr110481-0.0860.1419No
144Kif20b10699-0.0940.1321No
145Prmt510902-0.1030.1234No
146Hmmr10929-0.1050.1243No
147Mki6710957-0.1060.1252No
148Ccnd111013-0.1080.1247No
149Hmga1b11172-0.1150.1186No
150Plk111382-0.1230.1099No
151Tacc311413-0.1250.1111No
152Meis111607-0.1340.1036No
153Cenpf11633-0.1350.1053No
154Cdkn2c11813-0.1430.0987No
155Knl111904-0.1480.0971No
156Fbxo511950-0.1490.0981No
157Nup9812036-0.1530.0969No
158G3bp112041-0.1530.1001No
159Cenpa12091-0.1550.1010No
160Espl112133-0.1570.1023No
161Ccna212275-0.1650.0983No
162Mapk1412415-0.1720.0946No
163Foxn312490-0.1760.0945No
164Nek212594-0.1810.0930No
165Map3k2012914-0.1970.0799No
166Cks213060-0.2060.0767No
167Myc13350-0.2190.0658No
168Hmgb313412-0.2230.0675No
169Ccnf13504-0.2280.0677No
170Kif2313682-0.2360.0633No
171Prc113697-0.2360.0679No
172Traip13716-0.2370.0723No
173Pura13818-0.2440.0723No
174Dbf413916-0.2480.0726No
175Dtymk14104-0.2570.0682No
176Slc7a514237-0.2640.0669No
177Tgfb114256-0.2650.0720No
178Slc7a114540-0.2820.0629No
179H2ax14624-0.2860.0648No
180Srsf214707-0.2910.0669No
181Ube2c14743-0.2930.0716No
182Troap14762-0.2940.0773No
183Katna115268-0.3260.0570No
184Bub315372-0.3340.0590No
185Cdkn315636-0.3510.0525No
186Egf15792-0.3640.0523No
187Jpt116367-0.4110.0301No
188Ccnb216738-0.4500.0200No
189Marcks16797-0.4560.0272No
190Cdc25b16880-0.4650.0333No
191Cdc2017352-0.5230.0193No
192H2az217574-0.5620.0200No
193Meis217584-0.5630.0323No
194Cks1b17616-0.5690.0435No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_G2M_CHECKPOINT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_G2M_CHECKPOINT: Random ES distribution   
Gene set null distribution of ES for HALLMARK_G2M_CHECKPOINT