DatasetCLP.Basophil_Pheno.cls
#Group2_versus_Group3.Basophil_Pheno.cls
#Group2_versus_Group3_repos
PhenotypeBasophil_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class1
GeneSetHALLMARK_E2F_TARGETS
Enrichment Score (ES)0.49510482
Normalized Enrichment Score (NES)1.6460155
Nominal p-value0.060737528
FDR q-value0.15226333
FWER p-Value0.214
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Mcm3650.7930.0112Yes
2Dnmt1660.7930.0259Yes
3Brca11140.7300.0368Yes
4Dck1360.7120.0489Yes
5Psmc3ip1400.7080.0619Yes
6Tcf191490.7020.0745Yes
7Nasp1810.6770.0853Yes
8Dctpp11960.6650.0969Yes
9Mybl22420.6310.1061Yes
10Rbbp72530.6240.1172Yes
11Cdc25a2600.6190.1283Yes
12Rpa32900.6020.1379Yes
13Hells2990.6000.1486Yes
14Prim23050.5970.1594Yes
15Mcm43450.5790.1681Yes
16Mcm53530.5760.1784Yes
17Nudt213860.5670.1871Yes
18Ran4240.5580.1954Yes
19Smc1a4470.5500.2044Yes
20Smc35130.5330.2108Yes
21Rad51ap15290.5290.2198Yes
22Lsm85380.5260.2291Yes
23Ipo75430.5240.2386Yes
24Pcna6230.5010.2436Yes
25Ssrp16250.5000.2528Yes
26Mcm26280.4990.2619Yes
27Chek17120.4830.2663Yes
28Rrm27180.4820.2750Yes
29Donson7600.4760.2816Yes
30Anp32e7630.4750.2903Yes
31Srsf17690.4740.2988Yes
32Melk7700.4740.3076Yes
33Lmnb17750.4730.3162Yes
34Psip17990.4700.3237Yes
35Mcm68780.4570.3279Yes
36Hnrnpd8820.4570.3362Yes
37Mcm79040.4550.3435Yes
38Atad210060.4390.3461Yes
39Trip1312270.4100.3416Yes
40Cdkn1b12810.4030.3462Yes
41Timeless13000.4000.3526Yes
42Pnn13890.3910.3551Yes
43Rpa114090.3890.3612Yes
44Shmt114130.3880.3683Yes
45E2f815180.3780.3696Yes
46Rfc115430.3760.3752Yes
47Hus115500.3750.3819Yes
48Nolc115510.3750.3888Yes
49Tipin15950.3710.3933Yes
50Nap1l116690.3640.3961Yes
51Zw1016850.3620.4020Yes
52Lbr17000.3610.4079Yes
53Prkdc17200.3600.4136Yes
54Dut17520.3580.4185Yes
55Spc2417580.3570.4249Yes
56Lig117980.3540.4293Yes
57Pole18010.3530.4357Yes
58Ccp11019050.3440.4365Yes
59Brca219310.3420.4414Yes
60Bub1b19600.3400.4462Yes
61Xpo120110.3330.4497Yes
62Tfrc21000.3270.4509Yes
63Nme121310.3250.4553Yes
64Chek221580.3230.4599Yes
65Nup20522260.3180.4621Yes
66Eif2s122640.3160.4659Yes
67Pa2g424160.3040.4633Yes
68Ube2t24230.3030.4686Yes
69Nup10727030.2820.4585Yes
70Pold327440.2790.4615Yes
71Msh227960.2750.4638Yes
72Ccne128920.2690.4635Yes
73Brms1l29350.2640.4661Yes
74Rpa229910.2610.4680Yes
75Suv39h130410.2570.4700Yes
76Orc630720.2550.4731Yes
77Paics30880.2550.4770Yes
78Aurkb31010.2530.4811Yes
79Bard131240.2510.4845Yes
80Cdkn2a31900.2470.4855Yes
81Nup15332550.2440.4866Yes
82Pole432590.2440.4909Yes
83Slbp32850.2420.4940Yes
84Cse1l33920.2350.4926Yes
85Ubr734380.2330.4944Yes
86Cdkn1a35790.2240.4909Yes
87Nbn36170.2220.4930Yes
88Gins436530.2190.4951Yes
89Syncrip39850.2000.4806No
90Stag141150.1930.4772No
91Mre11a41840.1890.4769No
92Top2a44050.1780.4681No
93Cdca844610.1750.4684No
94Tmpo45330.1720.4677No
95Mad2l145380.1710.4706No
96Ncapd246340.1670.4685No
97Gspt146650.1650.4699No
98Kif2248360.1580.4635No
99Smc648410.1570.4662No
100Ezh248560.1570.4684No
101Pola249950.1520.4636No
102Hmgb250680.1480.4624No
103Cdk150840.1470.4643No
104Tk151450.1440.4637No
105Rad5052600.1390.4600No
106Rfc352990.1370.4605No
107Cbx553600.1340.4596No
108Aurka53690.1330.4617No
109Exosc853870.1320.4632No
110Ppp1r855470.1260.4568No
111Cdk456610.1200.4528No
112Tra2b59660.1060.4381No
113Ddx39a60030.1040.4381No
114Ilf360650.1010.4366No
115Tubb563350.0900.4235No
116Pttg165120.0820.4153No
117Mms22l65280.0810.4160No
118Dek66140.0770.4128No
119Xrcc667220.0730.4083No
120Dlgap567860.0710.4061No
121Stmn168120.0700.4060No
122Eed68180.0700.4071No
123Rfc269240.0650.4025No
124Ube2s69420.0650.4028No
125Asf1a69590.0640.4031No
126H2az169870.0630.4028No
127Spc2570370.0610.4012No
128Snrpb70890.0580.3995No
129Luc7l371100.0570.3995No
130Ranbp172280.0530.3940No
131Rad51c73500.0460.3882No
132Rad173520.0460.3890No
133Gins173760.0450.3886No
134Usp173780.0450.3894No
135Cit74540.0420.3860No
136Pds5b74710.0410.3859No
137Rad2175800.0370.3807No
138Kif475810.0370.3814No
139Ak277480.0280.3728No
140Racgap178080.0260.3700No
141Smc478110.0260.3704No
142Ctcf79870.0200.3611No
143Dclre1b80240.0180.3595No
144Lyar83250.0050.3431No
145Rnaseh2a8748-0.0120.3201No
146Tbrg48784-0.0130.3185No
147Orc28863-0.0160.3145No
148Pold19211-0.0310.2960No
149Birc59402-0.0390.2863No
150Mlh19632-0.0470.2746No
151Ung9894-0.0590.2614No
152Trp539976-0.0630.2581No
153Plk410008-0.0640.2576No
154Kif2c10072-0.0660.2553No
155Asf1b10387-0.0810.2396No
156Cenpe10423-0.0820.2392No
157Pold210430-0.0830.2404No
158Diaph310665-0.0930.2293No
159Prps110845-0.1010.2213No
160Tubg110847-0.1010.2231No
161Hmmr10929-0.1050.2206No
162Mki6710957-0.1060.2211No
163Phf5a10973-0.1060.2223No
164Cnot911037-0.1090.2208No
165Hmga1b11172-0.1150.2156No
166Plk111382-0.1230.2064No
167Mthfd211408-0.1250.2073No
168Tacc311413-0.1250.2095No
169Cdkn2c11813-0.1430.1902No
170Pms211895-0.1480.1885No
171Espl112133-0.1570.1784No
172Prdx412413-0.1720.1663No
173Ing312757-0.1890.1509No
174Spag512877-0.1950.1480No
175Pop712919-0.1970.1494No
176Cks213060-0.2060.1456No
177Wdr9013124-0.2090.1460No
178Pan213252-0.2140.1430No
179Myc13350-0.2190.1417No
180Hmgb313412-0.2230.1425No
181Nop5613886-0.2460.1211No
182Cenpm13888-0.2460.1256No
183Depdc1a14124-0.2580.1175No
184Wee114218-0.2630.1173No
185H2ax14624-0.2860.1003No
186Srsf214707-0.2910.1012No
187Mxd315294-0.3280.0751No
188Cdkn315636-0.3510.0629No
189Gins315670-0.3540.0677No
190Cdca315861-0.3700.0641No
191Kif18b16068-0.3860.0599No
192Jpt116367-0.4110.0512No
193Ccnb216738-0.4500.0393No
194Cdc25b16880-0.4650.0402No
195Cdc2017352-0.5230.0240No
196Cks1b17616-0.5690.0201No
197Dscc117772-0.6000.0227No
198Ppm1d17976-0.6540.0237No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_E2F_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_E2F_TARGETS