Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	CLP.Basophil_Pheno.cls #Group1_versus_Group4.Basophil_Pheno.cls #Group1_versus_Group4_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	0
GeneSet	HALLMARK_MYOGENESIS
Enrichment Score (ES)	0.23664178
Normalized Enrichment Score (NES)	0.9954493
Nominal p-value	0.51926976
FDR q-value	0.953319
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Prnp	15	1.145	0.0319	Yes
2	Clu	30	1.010	0.0601	Yes
3	Sptan1	68	0.895	0.0837	Yes
4	Kcnh2	222	0.699	0.0953	Yes
5	Fxyd1	259	0.677	0.1127	Yes
6	Pick1	307	0.650	0.1287	Yes
7	Gsn	337	0.636	0.1454	Yes
8	Flii	353	0.629	0.1625	Yes
9	Sirt2	394	0.616	0.1780	Yes
10	Pde4dip	583	0.565	0.1839	Yes
11	App	603	0.564	0.1990	Yes
12	Kcnh1	1604	0.409	0.1560	Yes
13	Gaa	1661	0.403	0.1644	Yes
14	Myh9	1683	0.402	0.1748	Yes
15	Tsc2	1753	0.395	0.1823	Yes
16	Itgb5	1807	0.388	0.1905	Yes
17	Slc6a8	1923	0.381	0.1951	Yes
18	Tagln	1927	0.381	0.2058	Yes
19	Ak1	2128	0.363	0.2053	Yes
20	Eif4a2	2148	0.362	0.2146	Yes
21	Mapk12	2240	0.354	0.2198	Yes
22	Pfkm	2258	0.352	0.2289	Yes
23	Cox7a1	2636	0.326	0.2176	Yes
24	Pygm	2804	0.314	0.2175	Yes
25	Sphk1	2845	0.311	0.2242	Yes
26	Lsp1	2993	0.301	0.2247	Yes
27	Sgcd	3069	0.294	0.2291	Yes
28	Itgb1	3112	0.291	0.2351	Yes
29	Mylk	3349	0.275	0.2300	Yes
30	Agl	3490	0.264	0.2299	Yes
31	Mapre3	3759	0.247	0.2224	Yes
32	Col4a2	3969	0.235	0.2177	Yes
33	Actn2	4008	0.232	0.2222	Yes
34	Dapk2	4044	0.230	0.2269	Yes
35	Bin1	4080	0.227	0.2315	Yes
36	Adcy9	4105	0.226	0.2366	Yes
37	Bhlhe40	4328	0.216	0.2307	No
38	Fgf2	4462	0.211	0.2295	No
39	Akt2	4627	0.202	0.2263	No
40	Sparc	4660	0.200	0.2302	No
41	Myh11	4767	0.193	0.2299	No
42	Hdac5	4952	0.182	0.2251	No
43	Smtn	4968	0.181	0.2294	No
44	Sh2b1	4986	0.180	0.2337	No
45	Rit1	5264	0.165	0.2232	No
46	Adam12	5351	0.161	0.2231	No
47	Ncam1	5373	0.160	0.2266	No
48	Psen2	5404	0.159	0.2295	No
49	Ablim1	5666	0.148	0.2194	No
50	Dmd	5695	0.146	0.2221	No
51	Vipr1	5719	0.145	0.2250	No
52	Camk2b	5786	0.142	0.2254	No
53	Erbb3	5873	0.138	0.2246	No
54	Itgb4	6189	0.123	0.2109	No
55	Myom1	6388	0.113	0.2033	No
56	Crat	6577	0.105	0.1960	No
57	Foxo4	6988	0.085	0.1760	No
58	Plxnb2	7370	0.070	0.1572	No
59	Mybpc3	7461	0.066	0.1541	No
60	Csrp3	7533	0.062	0.1520	No
61	Pcx	7953	0.045	0.1304	No
62	Ache	8134	0.038	0.1216	No
63	Atp2a1	8481	0.025	0.1034	No
64	Nos1	8522	0.023	0.1019	No
65	Myl6b	8739	0.013	0.0904	No
66	Svil	8869	0.008	0.0836	No
67	Agrn	8966	0.004	0.0785	No
68	Tnnc1	9094	0.000	0.0715	No
69	Tpm2	9146	-0.000	0.0687	No
70	Lpin1	9164	-0.001	0.0678	No
71	Ptp4a3	9324	-0.008	0.0594	No
72	Cryab	9523	-0.017	0.0490	No
73	Lama2	9693	-0.023	0.0404	No
74	Mef2a	10125	-0.041	0.0180	No
75	Large1	10128	-0.041	0.0191	No
76	Nav2	10192	-0.044	0.0169	No
77	Eno3	10289	-0.048	0.0130	No
78	Mylpf	10293	-0.048	0.0142	No
79	Cnn3	10395	-0.053	0.0102	No
80	Fhl1	10398	-0.053	0.0116	No
81	Cd36	10600	-0.062	0.0024	No
82	Myog	10863	-0.073	-0.0098	No
83	Chrnb1	11009	-0.080	-0.0155	No
84	Tpd52l1	11212	-0.088	-0.0240	No
85	Mef2d	11295	-0.092	-0.0258	No
86	Ppfia4	11336	-0.094	-0.0253	No
87	Dtna	11531	-0.102	-0.0330	No
88	Tead4	11536	-0.102	-0.0303	No
89	Sh3bgr	11539	-0.102	-0.0275	No
90	Pkia	11846	-0.115	-0.0409	No
91	Gabarapl2	12234	-0.131	-0.0584	No
92	Cdh13	12255	-0.132	-0.0557	No
93	Rb1	12321	-0.136	-0.0554	No
94	Acsl1	12333	-0.137	-0.0520	No
95	Tnnt3	12381	-0.140	-0.0506	No
96	Tnni2	12508	-0.146	-0.0533	No
97	Notch1	12711	-0.155	-0.0600	No
98	Reep1	12776	-0.158	-0.0590	No
99	Atp6ap1	12912	-0.166	-0.0616	No
100	Tnni1	13444	-0.191	-0.0852	No
101	Dmpk	13466	-0.192	-0.0808	No
102	Ocel1	13497	-0.194	-0.0769	No
103	Tpm3	13520	-0.195	-0.0726	No
104	Speg	13572	-0.198	-0.0697	No
105	Col1a1	13688	-0.205	-0.0701	No
106	Mef2c	13858	-0.211	-0.0733	No
107	Col15a1	13909	-0.213	-0.0700	No
108	Ryr1	13936	-0.215	-0.0652	No
109	Sorbs3	14179	-0.227	-0.0720	No
110	Klf5	14559	-0.250	-0.0855	No
111	Fdps	14710	-0.257	-0.0864	No
112	Tnnt1	14860	-0.266	-0.0869	No
113	Fkbp1b	15018	-0.273	-0.0877	No
114	Ckb	15078	-0.278	-0.0830	No
115	Bag1	15287	-0.294	-0.0859	No
116	Igfbp7	15874	-0.334	-0.1084	No
117	Ifrd1	15989	-0.344	-0.1048	No
118	Hbegf	16463	-0.385	-0.1197	No
119	Cdkn1a	16688	-0.407	-0.1203	No
120	Tgfb1	16923	-0.431	-0.1208	No
121	Nqo1	17270	-0.477	-0.1261	No
122	Sorbs1	17277	-0.477	-0.1127	No
123	Pdlim7	17283	-0.479	-0.0993	No
124	Myo1c	17319	-0.483	-0.0874	No
125	Kifc3	17362	-0.491	-0.0757	No
126	Myl4	17625	-0.539	-0.0746	No
127	Gja5	17813	-0.580	-0.0682	No
128	Syngr2	17826	-0.582	-0.0522	No
129	Gadd45b	18016	-0.636	-0.0443	No
130	Mras	18179	-0.708	-0.0329	No
131	Cox6a2	18217	-0.732	-0.0140	No
132	Schip1	18327	-0.852	0.0044	No