DatasetCLP.Basophil_Pheno.cls
#Group1_versus_Group4.Basophil_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeBasophil_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INTERFERON_ALPHA_RESPONSE
Enrichment Score (ES)-0.46962267
Normalized Enrichment Score (NES)-1.518344
Nominal p-value0.09784736
FDR q-value0.28240472
FWER p-Value0.368
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Il78780.503-0.0259No
2Lap311100.469-0.0179No
3Cnp12690.446-0.0070No
4Cxcl1021140.364-0.0372No
5Gmpr24920.334-0.0431No
6Batf226990.321-0.0402No
7Txnip27670.316-0.0300No
8Il1528940.307-0.0235No
9Ddx6031410.289-0.0242No
10Trim2548520.188-0.1093No
11Trafd153120.163-0.1272No
12Ifih155960.152-0.1360No
13Oasl163340.116-0.1711No
14Uba765070.108-0.1758No
15Dhx5865410.106-0.1729No
16Elf170450.083-0.1968No
17Helz271840.078-0.2009No
18Ifit273570.070-0.2072No
19Pnpt185300.022-0.2702No
20Eif2ak286620.017-0.2766No
21Ifi2788450.009-0.2861No
22Irf188910.007-0.2883No
23Herc69180-0.002-0.3039No
24Psme29226-0.004-0.3062No
25Wars19349-0.009-0.3125No
26Ccrl29440-0.014-0.3168No
27Tap19458-0.014-0.3171No
28Il4ra9491-0.016-0.3182No
29Csf19565-0.018-0.3214No
30Mvb12a9660-0.022-0.3255No
31Ifi359740-0.025-0.3287No
32Adar9746-0.026-0.3279No
33Cmtr110101-0.040-0.3455No
34Cd4710419-0.054-0.3604No
35Parp1210456-0.056-0.3599No
36Trim2110520-0.058-0.3608No
37Cmpk210664-0.064-0.3658No
38Isg1510885-0.074-0.3745No
39Procr10890-0.074-0.3715No
40Slc25a2811117-0.084-0.3802No
41Nub111345-0.095-0.3884No
42Irf211673-0.107-0.4016No
43Casp111745-0.110-0.4006No
44Trim2611840-0.114-0.4007No
45Stat212020-0.122-0.4052No
46Lpar612062-0.124-0.4020No
47Parp1412312-0.135-0.4096No
48Rnf3112616-0.151-0.4195No
49Tdrd712628-0.151-0.4135No
50Samd9l12803-0.159-0.4161No
51Gbp312896-0.165-0.4138No
52Tmem14012976-0.169-0.4108No
53Sp11013067-0.173-0.4081No
54Mx213115-0.175-0.4030No
55Psme113379-0.189-0.4091No
56Sell13806-0.208-0.4232No
57Ripk214479-0.244-0.4492No
58Irf714854-0.266-0.4580Yes
59Ncoa714995-0.273-0.4537Yes
60Epsti115021-0.274-0.4431Yes
61Isg2015022-0.274-0.4311Yes
62Trim12c15167-0.284-0.4265Yes
63Plscr115590-0.314-0.4357Yes
64Ogfr15722-0.325-0.4286Yes
65Trim1415869-0.334-0.4220Yes
66Ifit315905-0.337-0.4091Yes
67Ifitm115954-0.341-0.3968Yes
68Casp816015-0.346-0.3849Yes
69Mov1016488-0.387-0.3937Yes
70Bst216512-0.390-0.3779Yes
71Ifitm216569-0.394-0.3637Yes
72Irf916760-0.413-0.3559Yes
73B2m16823-0.418-0.3410Yes
74Rsad216827-0.420-0.3228Yes
75Ly6e17008-0.444-0.3131Yes
76Psma317066-0.452-0.2964Yes
77Tent5a17169-0.463-0.2817Yes
78Psmb817332-0.486-0.2692Yes
79Ifi4417485-0.515-0.2550Yes
80Parp917560-0.527-0.2359Yes
81Oas1a17604-0.534-0.2148Yes
82Cd7417646-0.544-0.1933Yes
83Psmb917730-0.561-0.1732Yes
84Rtp417736-0.563-0.1488Yes
85Ifi3017936-0.611-0.1329Yes
86Usp1817995-0.627-0.1086Yes
87Ifitm318008-0.632-0.0816Yes
88Ube2l618031-0.640-0.0547Yes
89Lgals3bp18313-0.827-0.0338Yes
90Nmi18347-0.8880.0033Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_ALPHA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_ALPHA_RESPONSE