| Dataset | CLP.Basophil_Pheno.cls #Group1_versus_Group4.Basophil_Pheno.cls #Group1_versus_Group4_repos |
| Phenotype | Basophil_Pheno.cls#Group1_versus_Group4_repos |
| Upregulated in class | 3 |
| GeneSet | HALLMARK_INFLAMMATORY_RESPONSE |
| Enrichment Score (ES) | -0.2705965 |
| Normalized Enrichment Score (NES) | -1.1979473 |
| Nominal p-value | 0.18307087 |
| FDR q-value | 0.40584508 |
| FWER p-Value | 0.935 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Slc11a2 | 14 | 1.168 | 0.0312 | No |
| 2 | P2rx7 | 104 | 0.822 | 0.0488 | No |
| 3 | Acvr2a | 281 | 0.662 | 0.0573 | No |
| 4 | Ahr | 649 | 0.552 | 0.0523 | No |
| 5 | Lck | 768 | 0.525 | 0.0602 | No |
| 6 | Atp2c1 | 1103 | 0.471 | 0.0548 | No |
| 7 | Plaur | 1771 | 0.392 | 0.0290 | No |
| 8 | Gnai3 | 1802 | 0.388 | 0.0380 | No |
| 9 | Aqp9 | 1821 | 0.387 | 0.0476 | No |
| 10 | Slc7a2 | 1869 | 0.384 | 0.0555 | No |
| 11 | Cxcl10 | 2114 | 0.364 | 0.0521 | No |
| 12 | Olr1 | 2186 | 0.359 | 0.0580 | No |
| 13 | Clec5a | 2548 | 0.329 | 0.0473 | No |
| 14 | Ros1 | 2621 | 0.326 | 0.0522 | No |
| 15 | Sphk1 | 2845 | 0.311 | 0.0485 | No |
| 16 | Il15 | 2894 | 0.307 | 0.0543 | No |
| 17 | P2rx4 | 3037 | 0.297 | 0.0547 | No |
| 18 | Btg2 | 3202 | 0.285 | 0.0535 | No |
| 19 | Atp2a2 | 3272 | 0.281 | 0.0574 | No |
| 20 | Fzd5 | 3274 | 0.281 | 0.0650 | No |
| 21 | Raf1 | 3405 | 0.271 | 0.0653 | No |
| 22 | Acvr1b | 3567 | 0.260 | 0.0636 | No |
| 23 | Il10ra | 3755 | 0.248 | 0.0602 | No |
| 24 | Met | 3824 | 0.246 | 0.0632 | No |
| 25 | Tnfrsf9 | 4013 | 0.232 | 0.0592 | No |
| 26 | Il2rb | 4354 | 0.216 | 0.0465 | No |
| 27 | Gpc3 | 4648 | 0.201 | 0.0359 | No |
| 28 | Hif1a | 4690 | 0.198 | 0.0391 | No |
| 29 | Gabbr1 | 4816 | 0.191 | 0.0375 | No |
| 30 | Tlr1 | 4830 | 0.190 | 0.0420 | No |
| 31 | Gna15 | 5029 | 0.178 | 0.0360 | No |
| 32 | Atp2b1 | 5093 | 0.174 | 0.0373 | No |
| 33 | Hrh1 | 5184 | 0.169 | 0.0370 | No |
| 34 | Rasgrp1 | 5189 | 0.169 | 0.0414 | No |
| 35 | Itgb3 | 5261 | 0.165 | 0.0421 | No |
| 36 | Mxd1 | 5353 | 0.161 | 0.0415 | No |
| 37 | Lcp2 | 5410 | 0.158 | 0.0428 | No |
| 38 | Slc1a2 | 5489 | 0.154 | 0.0427 | No |
| 39 | Chst2 | 5606 | 0.152 | 0.0405 | No |
| 40 | Sri | 5730 | 0.144 | 0.0377 | No |
| 41 | Nlrp3 | 6033 | 0.131 | 0.0248 | No |
| 42 | Il18r1 | 6465 | 0.110 | 0.0042 | No |
| 43 | Cd82 | 6553 | 0.106 | 0.0023 | No |
| 44 | Psen1 | 6582 | 0.105 | 0.0037 | No |
| 45 | Icosl | 6598 | 0.104 | 0.0057 | No |
| 46 | Icam4 | 6687 | 0.099 | 0.0036 | No |
| 47 | Cd69 | 6798 | 0.095 | 0.0001 | No |
| 48 | Slc4a4 | 6943 | 0.087 | -0.0054 | No |
| 49 | Pik3r5 | 7077 | 0.082 | -0.0104 | No |
| 50 | Sgms2 | 7317 | 0.072 | -0.0215 | No |
| 51 | Cxcr6 | 7360 | 0.070 | -0.0219 | No |
| 52 | Tapbp | 7377 | 0.070 | -0.0209 | No |
| 53 | Lpar1 | 7783 | 0.053 | -0.0416 | No |
| 54 | Il7r | 7818 | 0.051 | -0.0421 | No |
| 55 | Csf3r | 7831 | 0.050 | -0.0414 | No |
| 56 | Ptpre | 7939 | 0.046 | -0.0460 | No |
| 57 | Adrm1 | 8086 | 0.040 | -0.0529 | No |
| 58 | Best1 | 8098 | 0.040 | -0.0524 | No |
| 59 | Slc31a1 | 8108 | 0.039 | -0.0518 | No |
| 60 | Sema4d | 8120 | 0.038 | -0.0514 | No |
| 61 | Eif2ak2 | 8662 | 0.017 | -0.0805 | No |
| 62 | Sele | 8675 | 0.017 | -0.0807 | No |
| 63 | Adgre1 | 8857 | 0.008 | -0.0904 | No |
| 64 | Irf1 | 8891 | 0.007 | -0.0920 | No |
| 65 | Abi1 | 9313 | -0.008 | -0.1149 | No |
| 66 | Ccrl2 | 9440 | -0.014 | -0.1214 | No |
| 67 | Gch1 | 9456 | -0.014 | -0.1218 | No |
| 68 | Il4ra | 9491 | -0.016 | -0.1233 | No |
| 69 | Csf1 | 9565 | -0.018 | -0.1268 | No |
| 70 | Il18rap | 9568 | -0.018 | -0.1264 | No |
| 71 | Lyn | 9662 | -0.022 | -0.1309 | No |
| 72 | Mmp14 | 9747 | -0.026 | -0.1348 | No |
| 73 | Rgs16 | 9844 | -0.030 | -0.1392 | No |
| 74 | Ccl5 | 10000 | -0.036 | -0.1467 | No |
| 75 | Gp1ba | 10051 | -0.038 | -0.1484 | No |
| 76 | Tlr2 | 10250 | -0.046 | -0.1580 | No |
| 77 | Hpn | 10421 | -0.054 | -0.1658 | No |
| 78 | Il10 | 10489 | -0.057 | -0.1679 | No |
| 79 | Ldlr | 10522 | -0.059 | -0.1681 | No |
| 80 | Tnfrsf1b | 10523 | -0.059 | -0.1665 | No |
| 81 | Icam1 | 10695 | -0.066 | -0.1741 | No |
| 82 | Ebi3 | 10930 | -0.076 | -0.1848 | No |
| 83 | Slc28a2 | 11069 | -0.082 | -0.1901 | No |
| 84 | Kif1b | 11120 | -0.084 | -0.1905 | No |
| 85 | Il1r1 | 11169 | -0.086 | -0.1908 | No |
| 86 | Irak2 | 11444 | -0.099 | -0.2031 | No |
| 87 | Rela | 11643 | -0.106 | -0.2111 | No |
| 88 | Tnfsf10 | 12022 | -0.122 | -0.2284 | No |
| 89 | Rnf144b | 12049 | -0.124 | -0.2264 | No |
| 90 | Pde4b | 12184 | -0.129 | -0.2302 | No |
| 91 | Nod2 | 12197 | -0.129 | -0.2274 | No |
| 92 | Myc | 12204 | -0.130 | -0.2241 | No |
| 93 | Scarf1 | 12344 | -0.137 | -0.2280 | No |
| 94 | Nfkb1 | 12433 | -0.142 | -0.2289 | No |
| 95 | Tnfsf9 | 12492 | -0.145 | -0.2281 | No |
| 96 | Gpr132 | 12698 | -0.154 | -0.2351 | No |
| 97 | Scn1b | 12937 | -0.167 | -0.2436 | No |
| 98 | Osm | 13208 | -0.181 | -0.2535 | No |
| 99 | Ifngr2 | 13319 | -0.186 | -0.2544 | No |
| 100 | Ffar2 | 13616 | -0.201 | -0.2651 | Yes |
| 101 | Rgs1 | 13686 | -0.205 | -0.2633 | Yes |
| 102 | Npffr2 | 13705 | -0.205 | -0.2587 | Yes |
| 103 | Sell | 13806 | -0.208 | -0.2584 | Yes |
| 104 | Calcrl | 13864 | -0.211 | -0.2558 | Yes |
| 105 | Mefv | 13928 | -0.215 | -0.2534 | Yes |
| 106 | Pcdh7 | 14106 | -0.224 | -0.2569 | Yes |
| 107 | Stab1 | 14320 | -0.236 | -0.2621 | Yes |
| 108 | Slc7a1 | 14341 | -0.237 | -0.2568 | Yes |
| 109 | Kcnj2 | 14365 | -0.238 | -0.2515 | Yes |
| 110 | Slamf1 | 14408 | -0.241 | -0.2472 | Yes |
| 111 | Ripk2 | 14479 | -0.244 | -0.2444 | Yes |
| 112 | Cybb | 14503 | -0.246 | -0.2389 | Yes |
| 113 | Gpr183 | 14565 | -0.250 | -0.2354 | Yes |
| 114 | Itga5 | 14839 | -0.265 | -0.2431 | Yes |
| 115 | Irf7 | 14854 | -0.266 | -0.2366 | Yes |
| 116 | Ptger2 | 15118 | -0.281 | -0.2433 | Yes |
| 117 | Dcbld2 | 15337 | -0.298 | -0.2471 | Yes |
| 118 | Ptafr | 15410 | -0.304 | -0.2427 | Yes |
| 119 | Ptger4 | 15445 | -0.306 | -0.2362 | Yes |
| 120 | Selenos | 15598 | -0.315 | -0.2359 | Yes |
| 121 | Ifnar1 | 15674 | -0.321 | -0.2312 | Yes |
| 122 | Kcna3 | 15861 | -0.333 | -0.2323 | Yes |
| 123 | P2ry2 | 15882 | -0.335 | -0.2242 | Yes |
| 124 | Ifitm1 | 15954 | -0.341 | -0.2188 | Yes |
| 125 | Ccr7 | 15993 | -0.344 | -0.2114 | Yes |
| 126 | Slc31a2 | 16074 | -0.350 | -0.2062 | Yes |
| 127 | Kcnmb2 | 16153 | -0.356 | -0.2008 | Yes |
| 128 | Hbegf | 16463 | -0.385 | -0.2072 | Yes |
| 129 | Bst2 | 16512 | -0.390 | -0.1991 | Yes |
| 130 | Tlr3 | 16534 | -0.392 | -0.1895 | Yes |
| 131 | Cdkn1a | 16688 | -0.407 | -0.1868 | Yes |
| 132 | Abca1 | 16703 | -0.408 | -0.1764 | Yes |
| 133 | Nampt | 17004 | -0.444 | -0.1807 | Yes |
| 134 | Ly6e | 17008 | -0.444 | -0.1687 | Yes |
| 135 | Cmklr1 | 17245 | -0.474 | -0.1686 | Yes |
| 136 | Pvr | 17322 | -0.485 | -0.1595 | Yes |
| 137 | Klf6 | 17472 | -0.513 | -0.1537 | Yes |
| 138 | Adora2b | 17492 | -0.516 | -0.1406 | Yes |
| 139 | Il15ra | 17594 | -0.533 | -0.1315 | Yes |
| 140 | Nfkbia | 17702 | -0.556 | -0.1222 | Yes |
| 141 | Rtp4 | 17736 | -0.563 | -0.1086 | Yes |
| 142 | Ptgir | 17833 | -0.583 | -0.0979 | Yes |
| 143 | Il18 | 17850 | -0.588 | -0.0827 | Yes |
| 144 | Axl | 17905 | -0.601 | -0.0692 | Yes |
| 145 | Tacr3 | 17996 | -0.627 | -0.0569 | Yes |
| 146 | Cd48 | 18005 | -0.631 | -0.0401 | Yes |
| 147 | Rhog | 18099 | -0.669 | -0.0269 | Yes |
| 148 | Emp3 | 18181 | -0.709 | -0.0119 | Yes |
| 149 | Nmi | 18347 | -0.888 | 0.0033 | Yes |

